RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 AIMP1Q12904 312 aaKnown RBP21.16■□□□□ 0.98
HMGCL-209ENST00000513148 SPON1Q9HCB6 807 aa21.16■□□□□ 0.98
HMGCL-209ENST00000513148 TTLL7Q6ZT98 887 aa21.15■□□□□ 0.98
HMGCL-209ENST00000513148 LRP10Q7Z4F1 713 aa21.15■□□□□ 0.98
HMGCL-209ENST00000513148 STK31Q9BXU1 1019 aa21.14■□□□□ 0.98
HMGCL-209ENST00000513148 XAGE3Q8WTP9 111 aa21.14■□□□□ 0.97
HMGCL-209ENST00000513148 CAMTA2O94983 1202 aa21.13■□□□□ 0.97
HMGCL-209ENST00000513148 KIF6Q6ZMV9 814 aa21.13■□□□□ 0.97
HMGCL-209ENST00000513148 COPS6Q7L5N1 327 aa21.13■□□□□ 0.97
HMGCL-209ENST00000513148 ZBTB3Q9H5J0 574 aa21.13■□□□□ 0.97
HMGCL-209ENST00000513148 CHMP4AQ9BY43 222 aa21.12■□□□□ 0.97
HMGCL-209ENST00000513148 PHAXQ9H814 394 aaKnown RBP21.12■□□□□ 0.97
HMGCL-209ENST00000513148 BCL2L12Q9HB09 334 aa21.12■□□□□ 0.97
HMGCL-209ENST00000513148 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
HMGCL-209ENST00000513148 HYPKQ9NX55 129 aa21.12■□□□□ 0.97
HMGCL-209ENST00000513148 SLC4A2P04920 1241 aa21.11■□□□□ 0.97
HMGCL-209ENST00000513148 PTGER2P43116 358 aa21.11■□□□□ 0.97
HMGCL-209ENST00000513148 BICDL1Q6ZP65 573 aa21.11■□□□□ 0.97
HMGCL-209ENST00000513148 NLGN1Q8N2Q7 840 aa21.11■□□□□ 0.97
HMGCL-209ENST00000513148 MMP10P09238 476 aa21.1■□□□□ 0.97
HMGCL-209ENST00000513148 POLD1P28340 1107 aa21.1■□□□□ 0.97
HMGCL-209ENST00000513148 NUP98P52948 1817 aa21.1■□□□□ 0.97
HMGCL-209ENST00000513148 MAP3K15Q6ZN16 1313 aa21.1■□□□□ 0.97
HMGCL-209ENST00000513148 LRP5O75197 1615 aa21.09■□□□□ 0.97
HMGCL-209ENST00000513148 HLFQ16534 295 aa21.09■□□□□ 0.97
HMGCL-209ENST00000513148 SGIP1Q9BQI5 828 aa21.09■□□□□ 0.97
HMGCL-209ENST00000513148 TBC1D9BQ66K14 1250 aa21.08■□□□□ 0.97
HMGCL-209ENST00000513148 ZNF652Q9Y2D9 606 aa21.08■□□□□ 0.97
HMGCL-209ENST00000513148 G2E3Q7L622 706 aa21.07■□□□□ 0.96
HMGCL-209ENST00000513148 BCL2L13Q9BXK5 485 aa21.07■□□□□ 0.96
HMGCL-209ENST00000513148 NFIXQ14938 502 aa21.07■□□□□ 0.96
HMGCL-209ENST00000513148 PPP1R1BQ9UD71 204 aaPredicted RBP21.07■□□□□ 0.96
HMGCL-209ENST00000513148 CACNA1FO60840 1977 aa21.07■□□□□ 0.96
HMGCL-209ENST00000513148 ARFGEF2Q9Y6D5 1785 aa21.07■□□□□ 0.96
HMGCL-209ENST00000513148 ERVV-1B6SEH8 477 aa21.05■□□□□ 0.96
HMGCL-209ENST00000513148 DDR1Q08345 913 aa21.05■□□□□ 0.96
HMGCL-209ENST00000513148 ANKRD13DQ6ZTN6 518 aa21.05■□□□□ 0.96
HMGCL-209ENST00000513148 KLHL34Q8N239 644 aa21.05■□□□□ 0.96
HMGCL-209ENST00000513148 CLEC4GQ6UXB4 293 aa21.04■□□□□ 0.96
HMGCL-209ENST00000513148 SSH1Q8WYL5 1049 aa21.04■□□□□ 0.96
HMGCL-209ENST00000513148 PARP3Q9Y6F1 533 aa21.04■□□□□ 0.96
HMGCL-209ENST00000513148 TM4SF1P30408 202 aa21.04■□□□□ 0.96
HMGCL-209ENST00000513148 FLIIQ13045 1269 aa21.04■□□□□ 0.96
HMGCL-209ENST00000513148 PLBD2Q8NHP8 589 aa21.04■□□□□ 0.96
HMGCL-209ENST00000513148 NIP7Q9Y221 180 aaKnown RBP eCLIP21.04■□□□□ 0.96
HMGCL-209ENST00000513148 ANKRD36CQ5JPF3 1778 aa21.04■□□□□ 0.96
HMGCL-209ENST00000513148 GPTP24298 496 aa21.03■□□□□ 0.96
HMGCL-209ENST00000513148 GIGYF2Q6Y7W6 1299 aaKnown RBP21.03■□□□□ 0.96
HMGCL-209ENST00000513148 RIC3Q7Z5B4 369 aa21.03■□□□□ 0.96
HMGCL-209ENST00000513148 SMC4Q9NTJ3 1288 aa21.03■□□□□ 0.96
HMGCL-209ENST00000513148 AFDNP55196 1824 aaKnown RBP21.03■□□□□ 0.96
HMGCL-209ENST00000513148 POLRMTO00411 1230 aaKnown RBP21.02■□□□□ 0.96
HMGCL-209ENST00000513148 CT47B1P0C2W7 299 aaPredicted RBP21.02■□□□□ 0.96
HMGCL-209ENST00000513148 FKBP5Q13451 457 aaPredicted RBP21.02■□□□□ 0.96
HMGCL-209ENST00000513148 SETDB2Q96T68 719 aa21.02■□□□□ 0.96
HMGCL-209ENST00000513148 FAM177BA6PVY3 158 aa21.02■□□□□ 0.96
HMGCL-209ENST00000513148 DDX58O95786 925 aaKnown RBP21.02■□□□□ 0.96
HMGCL-209ENST00000513148 ZNF428Q96B54 188 aa21.02■□□□□ 0.96
HMGCL-209ENST00000513148 CARMIL3Q8ND23 1372 aa21.01■□□□□ 0.95
HMGCL-209ENST00000513148 MRPL50Q8N5N7 158 aaKnown RBP21■□□□□ 0.95
HMGCL-209ENST00000513148 ATP10DQ9P241 1426 aa21■□□□□ 0.95
HMGCL-209ENST00000513148 PI4KAP2A4QPH2 592 aa21■□□□□ 0.95
HMGCL-209ENST00000513148 PI4KAP1Q8N8J0 262 aa21■□□□□ 0.95
HMGCL-209ENST00000513148 MAP3K2Q9Y2U5 619 aa21■□□□□ 0.95
HMGCL-209ENST00000513148 NPHP1O15259 732 aa20.99■□□□□ 0.95
HMGCL-209ENST00000513148 SERPINB2P05120 415 aa20.99■□□□□ 0.95
HMGCL-209ENST00000513148 RARSP54136 660 aaKnown RBP20.99■□□□□ 0.95
HMGCL-209ENST00000513148 ALDH1L2Q3SY69 923 aa20.99■□□□□ 0.95
HMGCL-209ENST00000513148 ADCY9O60503 1353 aa20.99■□□□□ 0.95
HMGCL-209ENST00000513148 UBN2Q6ZU65 1347 aa20.99■□□□□ 0.95
HMGCL-209ENST00000513148 RGL2O15211 777 aa20.99■□□□□ 0.95
HMGCL-209ENST00000513148 ATP5J2-PTCD1G3V325 749 aa20.98■□□□□ 0.95
HMGCL-209ENST00000513148 KSR2Q6VAB6 950 aa20.98■□□□□ 0.95
HMGCL-209ENST00000513148 NRXN2Q9P2S2 1712 aa20.97■□□□□ 0.95
HMGCL-209ENST00000513148 TCIRG1Q13488 830 aa20.97■□□□□ 0.95
HMGCL-209ENST00000513148 HSP90AB3PQ58FF7 597 aa20.97■□□□□ 0.95
HMGCL-209ENST00000513148 NBPF5PQ86XG9 351 aaPredicted RBP20.97■□□□□ 0.95
HMGCL-209ENST00000513148 CCDC24Q8N4L8 307 aa20.97■□□□□ 0.95
HMGCL-209ENST00000513148 MYD88Q99836 296 aa20.97■□□□□ 0.95
HMGCL-209ENST00000513148 FHDC1Q9C0D6 1143 aaPredicted RBP20.97■□□□□ 0.95
HMGCL-209ENST00000513148 ZNF34Q8IZ26 560 aa20.97■□□□□ 0.95
HMGCL-209ENST00000513148 F6X3S4 739 aa20.96■□□□□ 0.95
HMGCL-209ENST00000513148 DEKP35659 375 aaKnown RBP20.96■□□□□ 0.95
HMGCL-209ENST00000513148 CNBD1Q8NA66 436 aa20.95■□□□□ 0.94
HMGCL-209ENST00000513148 BCAR3O75815 825 aa20.95■□□□□ 0.94
HMGCL-209ENST00000513148 METTL22Q9BUU2 404 aaPredicted RBP20.95■□□□□ 0.94
HMGCL-209ENST00000513148 SUSD4Q5VX71 490 aa20.94■□□□□ 0.94
HMGCL-209ENST00000513148 C10orf71Q711Q0 1435 aa20.94■□□□□ 0.94
HMGCL-209ENST00000513148 PRR5LQ6MZQ0 368 aa20.94■□□□□ 0.94
HMGCL-209ENST00000513148 NLRP10Q86W26 655 aa20.94■□□□□ 0.94
HMGCL-209ENST00000513148 NUTM1Q86Y26 1132 aa20.94■□□□□ 0.94
HMGCL-209ENST00000513148 DNAAF4Q8WXU2 420 aa20.94■□□□□ 0.94
HMGCL-209ENST00000513148 GTF2E1P29083 439 aaPredicted RBP20.93■□□□□ 0.94
HMGCL-209ENST00000513148 KIF13BQ9NQT8 1826 aa20.93■□□□□ 0.94
HMGCL-209ENST00000513148 NEXNQ0ZGT2 675 aa20.92■□□□□ 0.94
HMGCL-209ENST00000513148 PARP10Q53GL7 1025 aa20.92■□□□□ 0.94
HMGCL-209ENST00000513148 ISCA1Q9BUE6 129 aa20.92■□□□□ 0.94
HMGCL-209ENST00000513148 NOB1Q9ULX3 412 aaKnown RBP20.92■□□□□ 0.94
HMGCL-209ENST00000513148 SLC4A10Q6U841 1118 aa20.92■□□□□ 0.94
HMGCL-209ENST00000513148 TPTE2Q6XPS3 522 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms