RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 XAGE3Q8WTP9 111 aa22.44■■□□□ 1.18
DDR1-270ENST00000513043 ZBTB3Q9H5J0 574 aa22.44■■□□□ 1.18
DDR1-270ENST00000513043 NFIXQ14938 502 aa22.43■■□□□ 1.18
DDR1-270ENST00000513043 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
DDR1-270ENST00000513043 VAMP4O75379 141 aa22.42■■□□□ 1.18
DDR1-270ENST00000513043 DDR1Q08345 913 aa22.42■■□□□ 1.18
DDR1-270ENST00000513043 HLFQ16534 295 aa22.42■■□□□ 1.18
DDR1-270ENST00000513043 TBC1D9BQ66K14 1250 aa22.42■■□□□ 1.18
DDR1-270ENST00000513043 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
DDR1-270ENST00000513043 BCORQ6W2J9 1755 aa22.41■■□□□ 1.18
DDR1-270ENST00000513043 MAP3K15Q6ZN16 1313 aa22.41■■□□□ 1.18
DDR1-270ENST00000513043 HYPKQ9NX55 129 aa22.41■■□□□ 1.18
DDR1-270ENST00000513043 TM4SF1P30408 202 aa22.4■■□□□ 1.18
DDR1-270ENST00000513043 STK31Q9BXU1 1019 aa22.4■■□□□ 1.18
DDR1-270ENST00000513043 FHDC1Q9C0D6 1143 aaPredicted RBP22.4■■□□□ 1.18
DDR1-270ENST00000513043 ZNF652Q9Y2D9 606 aa22.4■■□□□ 1.18
DDR1-270ENST00000513043 CHMP4AQ9BY43 222 aa22.39■■□□□ 1.17
DDR1-270ENST00000513043 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.17
DDR1-270ENST00000513043 POLRMTO00411 1230 aaKnown RBP22.38■■□□□ 1.17
DDR1-270ENST00000513043 TRMT2AQ8IZ69 625 aaKnown RBP22.38■■□□□ 1.17
DDR1-270ENST00000513043 ERVV-1B6SEH8 477 aa22.37■■□□□ 1.17
DDR1-270ENST00000513043 CLEC4GQ6UXB4 293 aa22.37■■□□□ 1.17
DDR1-270ENST00000513043 ZBED9Q6R2W3 1325 aa22.36■■□□□ 1.17
DDR1-270ENST00000513043 SLC4A2P04920 1241 aa22.36■■□□□ 1.17
DDR1-270ENST00000513043 SETDB2Q96T68 719 aa22.36■■□□□ 1.17
DDR1-270ENST00000513043 NIP7Q9Y221 180 aaKnown RBP eCLIP22.36■■□□□ 1.17
DDR1-270ENST00000513043 FAM177BA6PVY3 158 aa22.35■■□□□ 1.17
DDR1-270ENST00000513043 SERPINB2P05120 415 aa22.35■■□□□ 1.17
DDR1-270ENST00000513043 GPTP24298 496 aa22.35■■□□□ 1.17
DDR1-270ENST00000513043 G2E3Q7L622 706 aa22.35■■□□□ 1.17
DDR1-270ENST00000513043 GIGYF2Q6Y7W6 1299 aaKnown RBP22.34■■□□□ 1.17
DDR1-270ENST00000513043 ANKRD13DQ6ZTN6 518 aa22.34■■□□□ 1.17
DDR1-270ENST00000513043 SYT17Q9BSW7 474 aa22.34■■□□□ 1.17
DDR1-270ENST00000513043 CARMIL3Q8ND23 1372 aa22.33■■□□□ 1.17
DDR1-270ENST00000513043 RGL2O15211 777 aa22.32■■□□□ 1.16
DDR1-270ENST00000513043 CCDC24Q8N4L8 307 aa22.32■■□□□ 1.16
DDR1-270ENST00000513043 NLGN2Q8NFZ4 835 aa22.32■■□□□ 1.16
DDR1-270ENST00000513043 PLBD2Q8NHP8 589 aa22.32■■□□□ 1.16
DDR1-270ENST00000513043 NUP98P52948 1817 aa22.31■■□□□ 1.16
DDR1-270ENST00000513043 NPHP1O15259 732 aa22.31■■□□□ 1.16
DDR1-270ENST00000513043 RIC3Q7Z5B4 369 aa22.31■■□□□ 1.16
DDR1-270ENST00000513043 ZNF428Q96B54 188 aa22.31■■□□□ 1.16
DDR1-270ENST00000513043 YTHDC1Q96MU7 727 aaKnown RBP22.31■■□□□ 1.16
DDR1-270ENST00000513043 NBPF5PQ86XG9 351 aaPredicted RBP22.3■■□□□ 1.16
DDR1-270ENST00000513043 CD2APQ9Y5K6 639 aa22.3■■□□□ 1.16
DDR1-270ENST00000513043 C10orf71Q711Q0 1435 aa22.3■■□□□ 1.16
DDR1-270ENST00000513043 ATP10DQ9P241 1426 aa22.3■■□□□ 1.16
DDR1-270ENST00000513043 UBN2Q6ZU65 1347 aa22.3■■□□□ 1.16
DDR1-270ENST00000513043 AFDNP55196 1824 aaKnown RBP22.29■■□□□ 1.16
DDR1-270ENST00000513043 DDX58O95786 925 aaKnown RBP22.29■■□□□ 1.16
DDR1-270ENST00000513043 ZNF34Q8IZ26 560 aa22.29■■□□□ 1.16
DDR1-270ENST00000513043 BCL2L13Q9BXK5 485 aa22.29■■□□□ 1.16
DDR1-270ENST00000513043 FLIIQ13045 1269 aa22.28■■□□□ 1.16
DDR1-270ENST00000513043 TCIRG1Q13488 830 aa22.28■■□□□ 1.16
DDR1-270ENST00000513043 PRR5LQ6MZQ0 368 aa22.28■■□□□ 1.16
DDR1-270ENST00000513043 CNBD1Q8NA66 436 aa22.28■■□□□ 1.16
DDR1-270ENST00000513043 ATP5J2-PTCD1G3V325 749 aa22.27■■□□□ 1.16
DDR1-270ENST00000513043 HSP90AB3PQ58FF7 597 aa22.27■■□□□ 1.16
DDR1-270ENST00000513043 SSH1Q8WYL5 1049 aa22.27■■□□□ 1.16
DDR1-270ENST00000513043 MAP3K2Q9Y2U5 619 aa22.27■■□□□ 1.16
DDR1-270ENST00000513043 NRXN2Q9P2S2 1712 aa22.26■■□□□ 1.15
DDR1-270ENST00000513043 ARFGEF2Q9Y6D5 1785 aa22.26■■□□□ 1.15
DDR1-270ENST00000513043 PI4KAP2A4QPH2 592 aa22.26■■□□□ 1.15
DDR1-270ENST00000513043 FKBP5Q13451 457 aaPredicted RBP22.26■■□□□ 1.15
DDR1-270ENST00000513043 SUSD4Q5VX71 490 aa22.26■■□□□ 1.15
DDR1-270ENST00000513043 PI4KAP1Q8N8J0 262 aa22.26■■□□□ 1.15
DDR1-270ENST00000513043 MYD88Q99836 296 aa22.26■■□□□ 1.15
DDR1-270ENST00000513043 WWC3Q9ULE0 1092 aa22.26■■□□□ 1.15
DDR1-270ENST00000513043 KSR2Q6VAB6 950 aa22.25■■□□□ 1.15
DDR1-270ENST00000513043 NUTM1Q86Y26 1132 aa22.25■■□□□ 1.15
DDR1-270ENST00000513043 ADCY9O60503 1353 aa22.25■■□□□ 1.15
DDR1-270ENST00000513043 GTF2E1P29083 439 aaPredicted RBP22.24■■□□□ 1.15
DDR1-270ENST00000513043 ST5P78524 1137 aa22.24■■□□□ 1.15
DDR1-270ENST00000513043 TPTE2Q6XPS3 522 aa22.24■■□□□ 1.15
DDR1-270ENST00000513043 NLRP10Q86W26 655 aa22.24■■□□□ 1.15
DDR1-270ENST00000513043 MRPL50Q8N5N7 158 aaKnown RBP22.24■■□□□ 1.15
DDR1-270ENST00000513043 SMC4Q9NTJ3 1288 aa22.24■■□□□ 1.15
DDR1-270ENST00000513043 ANKRD36CQ5JPF3 1778 aa22.23■■□□□ 1.15
DDR1-270ENST00000513043 A0A0G2JLW4 131 aa22.23■■□□□ 1.15
DDR1-270ENST00000513043 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
DDR1-270ENST00000513043 PARP10Q53GL7 1025 aa22.23■■□□□ 1.15
DDR1-270ENST00000513043 DPEP1P16444 411 aa22.22■■□□□ 1.15
DDR1-270ENST00000513043 CHRNA5P30532 468 aa22.22■■□□□ 1.15
DDR1-270ENST00000513043 PPP1R42Q7Z4L9 355 aa22.22■■□□□ 1.15
DDR1-270ENST00000513043 PELP1Q8IZL8 1130 aaKnown RBP22.22■■□□□ 1.15
DDR1-270ENST00000513043 ISCA1Q9BUE6 129 aa22.22■■□□□ 1.15
DDR1-270ENST00000513043 METTL22Q9BUU2 404 aaPredicted RBP22.22■■□□□ 1.15
DDR1-270ENST00000513043 NYXQ9GZU5 481 aa22.22■■□□□ 1.15
DDR1-270ENST00000513043 KIF13BQ9NQT8 1826 aa22.22■■□□□ 1.15
DDR1-270ENST00000513043 PXDNLA1KZ92 1463 aa22.22■■□□□ 1.15
DDR1-270ENST00000513043 F6X3S4 739 aa22.21■■□□□ 1.15
DDR1-270ENST00000513043 NTSR2O95665 410 aa22.21■■□□□ 1.15
DDR1-270ENST00000513043 TGFB2P61812 414 aa22.21■■□□□ 1.15
DDR1-270ENST00000513043 ALDH1L2Q3SY69 923 aa22.21■■□□□ 1.15
DDR1-270ENST00000513043 ERFEQ4G0M1 354 aa22.21■■□□□ 1.15
DDR1-270ENST00000513043 UTP14AQ9BVJ6 771 aaKnown RBP22.21■■□□□ 1.15
DDR1-270ENST00000513043 N4BP2Q86UW6 1770 aaPredicted RBP22.2■■□□□ 1.14
DDR1-270ENST00000513043 CACNA1FO60840 1977 aa22.2■■□□□ 1.14
DDR1-270ENST00000513043 TRMT112Q9UI30 125 aaKnown RBP22.2■■□□□ 1.14
DDR1-270ENST00000513043 ABCC12Q96J65 1359 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms