RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
CDK7-209ENST00000512985 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
CDK7-209ENST00000512985 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
CDK7-209ENST00000512985 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
CDK7-209ENST00000512985 NFIXQ14938 502 aa16.4■□□□□ 0.22
CDK7-209ENST00000512985 PDIA6Q15084 440 aa16.4■□□□□ 0.22
CDK7-209ENST00000512985 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
CDK7-209ENST00000512985 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
CDK7-209ENST00000512985 SLFN5Q08AF3 891 aa16.39■□□□□ 0.21
CDK7-209ENST00000512985 AIMP1Q12904 312 aaKnown RBP16.39■□□□□ 0.21
CDK7-209ENST00000512985 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
CDK7-209ENST00000512985 TSPYL6Q8N831 410 aa16.39■□□□□ 0.21
CDK7-209ENST00000512985 ZNF428Q96B54 188 aa16.39■□□□□ 0.21
CDK7-209ENST00000512985 BCL2L12Q9HB09 334 aa16.39■□□□□ 0.21
CDK7-209ENST00000512985 POLRMTO00411 1230 aaKnown RBP16.38■□□□□ 0.21
CDK7-209ENST00000512985 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
CDK7-209ENST00000512985 TBC1D9BQ66K14 1250 aa16.38■□□□□ 0.21
CDK7-209ENST00000512985 GIGYF2Q6Y7W6 1299 aaKnown RBP16.38■□□□□ 0.21
CDK7-209ENST00000512985 XAGE3Q8WTP9 111 aa16.38■□□□□ 0.21
CDK7-209ENST00000512985 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
CDK7-209ENST00000512985 ZBTB3Q9H5J0 574 aa16.38■□□□□ 0.21
CDK7-209ENST00000512985 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDK7-209ENST00000512985 SRCAPQ6ZRS2 3230 aa16.37■□□□□ 0.21
CDK7-209ENST00000512985 ANXA1P04083 346 aa16.37■□□□□ 0.21
CDK7-209ENST00000512985 SERPINB2P05120 415 aa16.37■□□□□ 0.21
CDK7-209ENST00000512985 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
CDK7-209ENST00000512985 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
CDK7-209ENST00000512985 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
CDK7-209ENST00000512985 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
CDK7-209ENST00000512985 NYXQ9GZU5 481 aa16.37■□□□□ 0.21
CDK7-209ENST00000512985 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
CDK7-209ENST00000512985 VAMP4O75379 141 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 TGFB2P61812 414 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 ST5P78524 1137 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 DDR1Q08345 913 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 PARP10Q53GL7 1025 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 LRP10Q7Z4F1 713 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 NBPF5PQ86XG9 351 aaPredicted RBP16.36■□□□□ 0.21
CDK7-209ENST00000512985 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
CDK7-209ENST00000512985 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
CDK7-209ENST00000512985 GTF2E1P29083 439 aaPredicted RBP16.35■□□□□ 0.21
CDK7-209ENST00000512985 PPP1R42Q7Z4L9 355 aa16.35■□□□□ 0.21
CDK7-209ENST00000512985 RIC3Q7Z5B4 369 aa16.35■□□□□ 0.21
CDK7-209ENST00000512985 CNBD1Q8NA66 436 aa16.35■□□□□ 0.21
CDK7-209ENST00000512985 ZBED9Q6R2W3 1325 aa16.35■□□□□ 0.21
CDK7-209ENST00000512985 HLFQ16534 295 aa16.34■□□□□ 0.21
CDK7-209ENST00000512985 C10orf71Q711Q0 1435 aa16.34■□□□□ 0.21
CDK7-209ENST00000512985 PDE6BP35913 854 aa16.33■□□□□ 0.2
CDK7-209ENST00000512985 NEXNQ0ZGT2 675 aa16.32■□□□□ 0.2
CDK7-209ENST00000512985 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
CDK7-209ENST00000512985 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
CDK7-209ENST00000512985 TRMT2AQ8IZ69 625 aaKnown RBP16.32■□□□□ 0.2
CDK7-209ENST00000512985 CDCA7LQ96GN5 454 aa16.32■□□□□ 0.2
CDK7-209ENST00000512985 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
CDK7-209ENST00000512985 ZNF34Q8IZ26 560 aa16.31■□□□□ 0.2
CDK7-209ENST00000512985 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
CDK7-209ENST00000512985 PHAXQ9H814 394 aaKnown RBP16.31■□□□□ 0.2
CDK7-209ENST00000512985 NUP98P52948 1817 aa16.31■□□□□ 0.2
CDK7-209ENST00000512985 CACNA1FO60840 1977 aa16.3■□□□□ 0.2
CDK7-209ENST00000512985 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
CDK7-209ENST00000512985 GPTP24298 496 aa16.3■□□□□ 0.2
CDK7-209ENST00000512985 FLIIQ13045 1269 aa16.3■□□□□ 0.2
CDK7-209ENST00000512985 FKBP5Q13451 457 aaPredicted RBP16.3■□□□□ 0.2
CDK7-209ENST00000512985 ALDH1L2Q3SY69 923 aa16.3■□□□□ 0.2
CDK7-209ENST00000512985 KSR2Q6VAB6 950 aa16.3■□□□□ 0.2
CDK7-209ENST00000512985 NRXN2Q9P2S2 1712 aa16.3■□□□□ 0.2
CDK7-209ENST00000512985 KIF13BQ9NQT8 1826 aa16.29■□□□□ 0.2
CDK7-209ENST00000512985 H0YIN7 160 aa16.29■□□□□ 0.2
CDK7-209ENST00000512985 PRR5LQ6MZQ0 368 aa16.29■□□□□ 0.2
CDK7-209ENST00000512985 UTP14AQ9BVJ6 771 aaKnown RBP16.29■□□□□ 0.2
CDK7-209ENST00000512985 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
CDK7-209ENST00000512985 TCERG1O14776 1098 aaKnown RBP16.28■□□□□ 0.2
CDK7-209ENST00000512985 GPR162Q16538 588 aa16.28■□□□□ 0.2
CDK7-209ENST00000512985 NLGN2Q8NFZ4 835 aa16.28■□□□□ 0.2
CDK7-209ENST00000512985 AFDNP55196 1824 aaKnown RBP16.28■□□□□ 0.2
CDK7-209ENST00000512985 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.2
CDK7-209ENST00000512985 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
CDK7-209ENST00000512985 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.2
CDK7-209ENST00000512985 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.2
CDK7-209ENST00000512985 PIM2Q9P1W9 311 aa16.27■□□□□ 0.2
CDK7-209ENST00000512985 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
CDK7-209ENST00000512985 MAP3K2Q9Y2U5 619 aa16.27■□□□□ 0.2
CDK7-209ENST00000512985 ANKRD36CQ5JPF3 1778 aa16.27■□□□□ 0.2
CDK7-209ENST00000512985 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 GRIN3BO60391 1043 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 SUSD4Q5VX71 490 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 NLRP10Q86W26 655 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
CDK7-209ENST00000512985 CCDC191Q8NCU4 936 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 PXDNLA1KZ92 1463 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 ARFGEF2Q9Y6D5 1785 aa16.26■□□□□ 0.19
CDK7-209ENST00000512985 PTPRCP08575 1304 aa16.25■□□□□ 0.19
CDK7-209ENST00000512985 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
CDK7-209ENST00000512985 A0A0G2JLW4 131 aa16.25■□□□□ 0.19
CDK7-209ENST00000512985 DPEP1P16444 411 aa16.25■□□□□ 0.19
CDK7-209ENST00000512985 DNAAF4Q8WXU2 420 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms