RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
TRIO-220ENST00000512979 ZNF454Q8N9F8 522 aa12.96□□□□□ -0.33
TRIO-220ENST00000512979 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.33
TRIO-220ENST00000512979 FHDC1Q9C0D6 1143 aaPredicted RBP12.96□□□□□ -0.33
TRIO-220ENST00000512979 TFCP2L1Q9NZI6 479 aa12.96□□□□□ -0.33
TRIO-220ENST00000512979 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.33
TRIO-220ENST00000512979 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
TRIO-220ENST00000512979 CYP27B1O15528 508 aa12.95□□□□□ -0.34
TRIO-220ENST00000512979 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
TRIO-220ENST00000512979 YY1P25490 414 aa12.95□□□□□ -0.34
TRIO-220ENST00000512979 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
TRIO-220ENST00000512979 TTC13Q8NBP0 860 aa12.95□□□□□ -0.34
TRIO-220ENST00000512979 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRIO-220ENST00000512979 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
TRIO-220ENST00000512979 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
TRIO-220ENST00000512979 POM121Q96HA1 1249 aa12.94□□□□□ -0.34
TRIO-220ENST00000512979 EYA1Q99502 592 aa12.94□□□□□ -0.34
TRIO-220ENST00000512979 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
TRIO-220ENST00000512979 PANK3Q9H999 370 aa12.94□□□□□ -0.34
TRIO-220ENST00000512979 RBM27Q9P2N5 1060 aaKnown RBP12.94□□□□□ -0.34
TRIO-220ENST00000512979 CLK2P49760 499 aaKnown RBP12.93□□□□□ -0.34
TRIO-220ENST00000512979 MPRIPQ6WCQ1 1025 aa12.93□□□□□ -0.34
TRIO-220ENST00000512979 SLC16A10Q8TF71 515 aa12.93□□□□□ -0.34
TRIO-220ENST00000512979 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
TRIO-220ENST00000512979 LY75O60449 1722 aa12.92□□□□□ -0.34
TRIO-220ENST00000512979 POLD1P28340 1107 aa12.92□□□□□ -0.34
TRIO-220ENST00000512979 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
TRIO-220ENST00000512979 ADAM33Q9BZ11 813 aa12.92□□□□□ -0.34
TRIO-220ENST00000512979 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
TRIO-220ENST00000512979 SPG7Q9UQ90 795 aa12.92□□□□□ -0.34
TRIO-220ENST00000512979 PALLDQ8WX93 1383 aa12.92□□□□□ -0.34
TRIO-220ENST00000512979 RAD21O60216 631 aa12.91□□□□□ -0.34
TRIO-220ENST00000512979 EIF4A2Q14240 407 aaKnown RBP12.91□□□□□ -0.34
TRIO-220ENST00000512979 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
TRIO-220ENST00000512979 PRSS12P56730 875 aa12.9□□□□□ -0.34
TRIO-220ENST00000512979 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.34
TRIO-220ENST00000512979 QSER1Q2KHR3 1735 aa12.89□□□□□ -0.35
TRIO-220ENST00000512979 NUDT7P0C024 238 aa12.89□□□□□ -0.35
TRIO-220ENST00000512979 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
TRIO-220ENST00000512979 RBM46Q8TBY0 533 aaKnown RBP12.89□□□□□ -0.35
TRIO-220ENST00000512979 PIGBQ92521 554 aa12.89□□□□□ -0.35
TRIO-220ENST00000512979 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
TRIO-220ENST00000512979 CDCA7LQ96GN5 454 aa12.89□□□□□ -0.35
TRIO-220ENST00000512979 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
TRIO-220ENST00000512979 TUBGCP6Q96RT7 1819 aa12.88□□□□□ -0.35
TRIO-220ENST00000512979 SPDYE5A6NIY4 337 aa12.88□□□□□ -0.35
TRIO-220ENST00000512979 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
TRIO-220ENST00000512979 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
TRIO-220ENST00000512979 IFNL2Q8IZJ0 200 aa12.88□□□□□ -0.35
TRIO-220ENST00000512979 KHSRPQ92945 711 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRIO-220ENST00000512979 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
TRIO-220ENST00000512979 PHKG2P15735 406 aa12.87□□□□□ -0.35
TRIO-220ENST00000512979 RFC5P40937 340 aa12.87□□□□□ -0.35
TRIO-220ENST00000512979 DIXDC1Q155Q3 683 aa12.87□□□□□ -0.35
TRIO-220ENST00000512979 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
TRIO-220ENST00000512979 KNSTRNQ9Y448 316 aa12.87□□□□□ -0.35
TRIO-220ENST00000512979 IGSF1Q8N6C5 1336 aa12.87□□□□□ -0.35
TRIO-220ENST00000512979 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
TRIO-220ENST00000512979 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
TRIO-220ENST00000512979 FLAD1Q8NFF5 587 aa12.85□□□□□ -0.35
TRIO-220ENST00000512979 SNRKQ9NRH2 765 aa12.85□□□□□ -0.35
TRIO-220ENST00000512979 LIMD1Q9UGP4 676 aa12.85□□□□□ -0.35
TRIO-220ENST00000512979 C5P01031 1676 aa12.85□□□□□ -0.35
TRIO-220ENST00000512979 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 ITGB4P16144 1822 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 SIK1P57059 783 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 GPR162Q16538 588 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 ASAP1Q9ULH1 1129 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 KIF7Q2M1P5 1343 aa12.84□□□□□ -0.35
TRIO-220ENST00000512979 COL24A1Q17RW2 1714 aa12.83□□□□□ -0.36
TRIO-220ENST00000512979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
TRIO-220ENST00000512979 PLEKHO1Q53GL0 409 aaPredicted RBP12.83□□□□□ -0.36
TRIO-220ENST00000512979 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
TRIO-220ENST00000512979 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
TRIO-220ENST00000512979 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
TRIO-220ENST00000512979 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
TRIO-220ENST00000512979 PDIA4P13667 645 aaKnown RBP12.82□□□□□ -0.36
TRIO-220ENST00000512979 AMIGO3Q86WK7 504 aa12.82□□□□□ -0.36
TRIO-220ENST00000512979 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
TRIO-220ENST00000512979 LINC00116Q8NCU8 138 aa12.82□□□□□ -0.36
TRIO-220ENST00000512979 SPIRE2Q8WWL2 714 aa12.82□□□□□ -0.36
TRIO-220ENST00000512979 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
TRIO-220ENST00000512979 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
TRIO-220ENST00000512979 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
TRIO-220ENST00000512979 ITPK1Q13572 414 aa12.81□□□□□ -0.36
TRIO-220ENST00000512979 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
TRIO-220ENST00000512979 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
TRIO-220ENST00000512979 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
TRIO-220ENST00000512979 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
TRIO-220ENST00000512979 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
TRIO-220ENST00000512979 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
TRIO-220ENST00000512979 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
TRIO-220ENST00000512979 SSFA2P28290 1259 aa12.8□□□□□ -0.36
TRIO-220ENST00000512979 TMEM259Q4ZIN3 620 aa12.8□□□□□ -0.36
TRIO-220ENST00000512979 SULT6B1Q6IMI4 303 aa12.8□□□□□ -0.36
TRIO-220ENST00000512979 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
TRIO-220ENST00000512979 DCAF5Q96JK2 942 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms