RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
LINC01550-203ENST00000512901 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
LINC01550-203ENST00000512901 ZBTB3Q9H5J0 574 aa13.22□□□□□ -0.29
LINC01550-203ENST00000512901 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.29
LINC01550-203ENST00000512901 NEXNQ0ZGT2 675 aa13.21□□□□□ -0.29
LINC01550-203ENST00000512901 RC3H1Q5TC82 1133 aaKnown RBP13.21□□□□□ -0.29
LINC01550-203ENST00000512901 AK7Q96M32 723 aa13.21□□□□□ -0.29
LINC01550-203ENST00000512901 LRRC4BQ9NT99 713 aa13.21□□□□□ -0.29
LINC01550-203ENST00000512901 N4BP2Q86UW6 1770 aaPredicted RBP13.21□□□□□ -0.29
LINC01550-203ENST00000512901 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.3
LINC01550-203ENST00000512901 PPP4R2Q9NY27 417 aa13.21□□□□□ -0.3
LINC01550-203ENST00000512901 C4BP0C0L5 1744 aa13.21□□□□□ -0.3
LINC01550-203ENST00000512901 GNPATO15228 680 aa13.2□□□□□ -0.3
LINC01550-203ENST00000512901 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
LINC01550-203ENST00000512901 MYD88Q99836 296 aa13.2□□□□□ -0.3
LINC01550-203ENST00000512901 COL15A1P39059 1388 aa13.2□□□□□ -0.3
LINC01550-203ENST00000512901 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
LINC01550-203ENST00000512901 AAMPQ13685 434 aa13.2□□□□□ -0.3
LINC01550-203ENST00000512901 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
LINC01550-203ENST00000512901 METTL22Q9BUU2 404 aaPredicted RBP13.2□□□□□ -0.3
LINC01550-203ENST00000512901 TBC1D2BQ9UPU7 963 aa13.2□□□□□ -0.3
LINC01550-203ENST00000512901 MAP3K15Q6ZN16 1313 aa13.19□□□□□ -0.3
LINC01550-203ENST00000512901 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
LINC01550-203ENST00000512901 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
LINC01550-203ENST00000512901 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
LINC01550-203ENST00000512901 A0A087WZG4 1122 aa13.19□□□□□ -0.3
LINC01550-203ENST00000512901 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
LINC01550-203ENST00000512901 LINS1Q8NG48 757 aa13.19□□□□□ -0.3
LINC01550-203ENST00000512901 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
LINC01550-203ENST00000512901 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
LINC01550-203ENST00000512901 PROM2Q8N271 834 aa13.18□□□□□ -0.3
LINC01550-203ENST00000512901 ALDH1L1O75891 902 aa13.18□□□□□ -0.3
LINC01550-203ENST00000512901 BAG6P46379 1132 aa13.18□□□□□ -0.3
LINC01550-203ENST00000512901 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
LINC01550-203ENST00000512901 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
LINC01550-203ENST00000512901 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
LINC01550-203ENST00000512901 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
LINC01550-203ENST00000512901 ATP5J2-PTCD1G3V325 749 aa13.17□□□□□ -0.3
LINC01550-203ENST00000512901 PHF14O94880 888 aa13.17□□□□□ -0.3
LINC01550-203ENST00000512901 MEIS3Q99687 375 aa13.17□□□□□ -0.3
LINC01550-203ENST00000512901 ZBTB40Q9NUA8 1239 aa13.17□□□□□ -0.3
LINC01550-203ENST00000512901 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
LINC01550-203ENST00000512901 HSP90AB3PQ58FF7 597 aa13.16□□□□□ -0.3
LINC01550-203ENST00000512901 GIGYF2Q6Y7W6 1299 aaKnown RBP13.16□□□□□ -0.3
LINC01550-203ENST00000512901 C9orf78Q9NZ63 289 aaPredicted RBP13.16□□□□□ -0.3
LINC01550-203ENST00000512901 NEURL1BA8MQ27 555 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 GNAI3P08754 354 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 NUP98P52948 1817 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 EZH2Q15910 746 aaKnown RBP13.15□□□□□ -0.3
LINC01550-203ENST00000512901 B4GALNT3Q6L9W6 998 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
LINC01550-203ENST00000512901 HLFQ16534 295 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 C1orf115Q9H7X2 142 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 UBR3Q6ZT12 1888 aa13.15□□□□□ -0.3
LINC01550-203ENST00000512901 ZPR1O75312 459 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 CAMTA2O94983 1202 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 RFC4P35249 363 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 BCORQ6W2J9 1755 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 GCKRQ14397 625 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 DEFB132Q7Z7B7 95 aa13.14□□□□□ -0.31
LINC01550-203ENST00000512901 CWC25Q9NXE8 425 aaPredicted RBP13.14□□□□□ -0.31
LINC01550-203ENST00000512901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
LINC01550-203ENST00000512901 GNAI2P04899 355 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 ADRA2BP18089 450 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 GPTP24298 496 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
LINC01550-203ENST00000512901 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 NARFQ9UHQ1 456 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 GRM8O00222 908 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 SSFA2P28290 1259 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 ISCA1Q9BUE6 129 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
LINC01550-203ENST00000512901 C4AP0C0L4 1744 aa13.12□□□□□ -0.31
LINC01550-203ENST00000512901 NBPF7P0C2Y1 421 aaPredicted RBP13.12□□□□□ -0.31
LINC01550-203ENST00000512901 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
LINC01550-203ENST00000512901 SCN7AQ01118 1682 aa13.12□□□□□ -0.31
LINC01550-203ENST00000512901 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
LINC01550-203ENST00000512901 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
LINC01550-203ENST00000512901 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
LINC01550-203ENST00000512901 SRP68Q9UHB9 627 aaKnown RBP13.11□□□□□ -0.31
LINC01550-203ENST00000512901 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
LINC01550-203ENST00000512901 TRIM28Q13263 835 aaKnown RBP13.11□□□□□ -0.31
LINC01550-203ENST00000512901 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC01550-203ENST00000512901 LRRFIP2Q9Y608 721 aaKnown RBP13.11□□□□□ -0.31
LINC01550-203ENST00000512901 USP42Q9H9J4 1324 aaKnown RBP13.1□□□□□ -0.31
LINC01550-203ENST00000512901 RGL2O15211 777 aa13.1□□□□□ -0.31
LINC01550-203ENST00000512901 STK32BQ9NY57 414 aa13.1□□□□□ -0.31
LINC01550-203ENST00000512901 MSH5O43196 834 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms