RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 NEK1Q96PY6 1258 aa14.45□□□□□ -0.1
COL11A1-210ENST00000512756 GRIN2AQ12879 1464 aa14.45□□□□□ -0.1
COL11A1-210ENST00000512756 POTEB2H3BUK9 544 aa14.45□□□□□ -0.1
COL11A1-210ENST00000512756 ANAPC15P60006 121 aa14.45□□□□□ -0.1
COL11A1-210ENST00000512756 TMEM266Q2M3C6 531 aa14.45□□□□□ -0.1
COL11A1-210ENST00000512756 AMOTL2Q9Y2J4 779 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 KANK3Q6NY19 840 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 MAP3K2Q9Y2U5 619 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 ANKRD62A6NC57 917 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 TNIP1Q15025 636 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 BICDL1Q6ZP65 573 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 CATIPQ7Z7H3 387 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 TEX13AQ9BXU3 409 aaPredicted RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 CCDC194A0A1B0GVG4 234 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 NUTM2BA6NNL0 878 aaPredicted RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 NUTM2EB1AL46 878 aaPredicted RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 GBP2P32456 591 aaPredicted RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 IARSP41252 1262 aaKnown RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 PAFAH1B1P43034 410 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 NUTM2AQ8IVF1 878 aaPredicted RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 RANBP6O60518 1105 aaKnown RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 PAF1Q8N7H5 531 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 TFIP11Q9UBB9 837 aaKnown RBP14.44□□□□□ -0.1
COL11A1-210ENST00000512756 USP16Q9Y5T5 823 aa14.44□□□□□ -0.1
COL11A1-210ENST00000512756 SHTN1A0MZ66 631 aa14.43□□□□□ -0.1
COL11A1-210ENST00000512756 CCT2P78371 535 aaKnown RBP14.43□□□□□ -0.1
COL11A1-210ENST00000512756 ZNF444Q8N0Y2 327 aaPredicted RBP14.43□□□□□ -0.1
COL11A1-210ENST00000512756 DZIP1Q86YF9 867 aaKnown RBP14.43□□□□□ -0.1
COL11A1-210ENST00000512756 GDPD2Q9HCC8 539 aa14.43□□□□□ -0.1
COL11A1-210ENST00000512756 LRSAM1Q6UWE0 723 aa14.43□□□□□ -0.1
COL11A1-210ENST00000512756 TMX3Q96JJ7 454 aa14.43□□□□□ -0.1
COL11A1-210ENST00000512756 PRIMPOLQ96LW4 560 aa14.43□□□□□ -0.1
COL11A1-210ENST00000512756 RHPN1Q8TCX5 695 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 SNX21Q969T3 373 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 NUP88Q99567 741 aaPredicted RBP14.42□□□□□ -0.1
COL11A1-210ENST00000512756 NUP160Q12769 1436 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 ZSCAN22P10073 491 aaPredicted RBP14.42□□□□□ -0.1
COL11A1-210ENST00000512756 NLRP5P59047 1200 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 ORC3Q9UBD5 711 aaPredicted RBP14.42□□□□□ -0.1
COL11A1-210ENST00000512756 ASXL1Q8IXJ9 1541 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 PI4KAP2A4QPH2 592 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 PI4KAP1Q8N8J0 262 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 CCDC150Q8NCX0 1101 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 C16orf45Q96MC5 204 aaPredicted RBP14.42□□□□□ -0.1
COL11A1-210ENST00000512756 ERICH4A6NGS2 130 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 GOLIM4O00461 696 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 SLF2Q8IX21 1173 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 NCOA7Q8NI08 942 aa14.42□□□□□ -0.1
COL11A1-210ENST00000512756 SDSP20132 328 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 ANKRD44Q8N8A2 993 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 CCDC12Q8WUD4 166 aaPredicted RBP14.41□□□□□ -0.1
COL11A1-210ENST00000512756 CWC25Q9NXE8 425 aaPredicted RBP14.41□□□□□ -0.1
COL11A1-210ENST00000512756 CCDC102BQ68D86 513 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 TMC6Q7Z403 805 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 IFNL2Q8IZJ0 200 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 AMPD3Q01432 767 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 ZPR1O75312 459 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 LUZP1Q86V48 1076 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 PAXBP1Q9Y5B6 917 aa14.41□□□□□ -0.1
COL11A1-210ENST00000512756 MPHOSPH10O00566 681 aaKnown RBP14.4□□□□□ -0.1
COL11A1-210ENST00000512756 KIF5BP33176 963 aa14.4□□□□□ -0.1
COL11A1-210ENST00000512756 PCDHB15Q9Y5E8 787 aa14.4□□□□□ -0.1
COL11A1-210ENST00000512756 DYNC1I1O14576 645 aa14.4□□□□□ -0.1
COL11A1-210ENST00000512756 CCDC82Q8N4S0 544 aa14.4□□□□□ -0.1
COL11A1-210ENST00000512756 CRACR2BQ8N4Y2 399 aaPredicted RBP14.4□□□□□ -0.1
COL11A1-210ENST00000512756 TRMT1Q9NXH9 659 aaKnown RBP14.4□□□□□ -0.1
COL11A1-210ENST00000512756 TMEM67Q5HYA8 995 aa14.4□□□□□ -0.1
COL11A1-210ENST00000512756 PDE1AP54750 535 aa14.4□□□□□ -0.11
COL11A1-210ENST00000512756 TCP11L1Q9NUJ3 509 aa14.4□□□□□ -0.11
COL11A1-210ENST00000512756 CBX1P83916 185 aa14.39□□□□□ -0.11
COL11A1-210ENST00000512756 SNW1Q13573 536 aaKnown RBP14.39□□□□□ -0.11
COL11A1-210ENST00000512756 METAP2P50579 478 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL11A1-210ENST00000512756 LDHAL6AQ6ZMR3 332 aa14.39□□□□□ -0.11
COL11A1-210ENST00000512756 FAM114A1Q8IWE2 563 aa14.39□□□□□ -0.11
COL11A1-210ENST00000512756 LARP6Q9BRS8 491 aaKnown RBP14.39□□□□□ -0.11
COL11A1-210ENST00000512756 FAM83GA6ND36 823 aa14.39□□□□□ -0.11
COL11A1-210ENST00000512756 PARD3Q8TEW0 1356 aa14.39□□□□□ -0.11
COL11A1-210ENST00000512756 FOXO3O43524 673 aa14.39□□□□□ -0.11
COL11A1-210ENST00000512756 ZFYP08048 801 aaPredicted RBP14.39□□□□□ -0.11
COL11A1-210ENST00000512756 MATR3P43243 847 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL11A1-210ENST00000512756 NAA15Q9BXJ9 866 aaKnown RBP14.39□□□□□ -0.11
COL11A1-210ENST00000512756 INCENPQ9NQS7 918 aa14.39□□□□□ -0.11
COL11A1-210ENST00000512756 FBXO31Q5XUX0 539 aaPredicted RBP14.38□□□□□ -0.11
COL11A1-210ENST00000512756 ALS2CR12Q96Q35 445 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 POLR3AO14802 1390 aaPredicted RBP14.38□□□□□ -0.11
COL11A1-210ENST00000512756 CCDC171Q6TFL3 1326 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 CPLX3Q8WVH0 158 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 ESYT1Q9BSJ8 1104 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 CALCOCO1Q9P1Z2 691 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 RBM27Q9P2N5 1060 aaKnown RBP14.38□□□□□ -0.11
COL11A1-210ENST00000512756 BIN1O00499 593 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 LDHCP07864 332 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 SNRPA1P09661 255 aaKnown RBP14.38□□□□□ -0.11
COL11A1-210ENST00000512756 UQCRFS1P1P0C7P4 283 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 SSR1P43307 286 aaKnown RBP14.38□□□□□ -0.11
COL11A1-210ENST00000512756 SF3B2Q13435 895 aaKnown RBP14.38□□□□□ -0.11
COL11A1-210ENST00000512756 UBE3BQ7Z3V4 1068 aa14.38□□□□□ -0.11
COL11A1-210ENST00000512756 CALML4Q96GE6 196 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms