RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 KLK14Q9P0G3 267 aa11.22□□□□□ -0.61
RFC1-214ENST00000512726 MEN1O00255 615 aa11.21□□□□□ -0.61
RFC1-214ENST00000512726 GNA15P30679 374 aa11.21□□□□□ -0.61
RFC1-214ENST00000512726 PTGIRP43119 386 aa11.21□□□□□ -0.61
RFC1-214ENST00000512726 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.61
RFC1-214ENST00000512726 FRMD6Q96NE9 622 aa11.21□□□□□ -0.61
RFC1-214ENST00000512726 CSRNP1Q96S65 589 aa11.21□□□□□ -0.61
RFC1-214ENST00000512726 ZSCAN10Q96SZ4 725 aaPredicted RBP11.21□□□□□ -0.61
RFC1-214ENST00000512726 FAM13BQ9NYF5 915 aa11.21□□□□□ -0.61
RFC1-214ENST00000512726 RPLP1P05386 114 aaKnown RBP11.2□□□□□ -0.62
RFC1-214ENST00000512726 ZNF76P36508 570 aa11.2□□□□□ -0.62
RFC1-214ENST00000512726 FANCCQ00597 558 aa11.2□□□□□ -0.62
RFC1-214ENST00000512726 RAD51AP2Q09MP3 1159 aa11.2□□□□□ -0.62
RFC1-214ENST00000512726 NNTQ13423 1086 aa11.2□□□□□ -0.62
RFC1-214ENST00000512726 C1orf53Q5VUE5 145 aa11.2□□□□□ -0.62
RFC1-214ENST00000512726 ZNF295-AS1Q8N0V1 137 aa11.2□□□□□ -0.62
RFC1-214ENST00000512726 KDF1Q8NAX2 398 aaPredicted RBP11.2□□□□□ -0.62
RFC1-214ENST00000512726 TGIF2Q9GZN2 237 aa11.2□□□□□ -0.62
RFC1-214ENST00000512726 PARP3Q9Y6F1 533 aa11.2□□□□□ -0.62
RFC1-214ENST00000512726 ALDH1A1P00352 501 aa11.19□□□□□ -0.62
RFC1-214ENST00000512726 CBLBQ13191 982 aa11.19□□□□□ -0.62
RFC1-214ENST00000512726 TMEM214Q6NUQ4 689 aaKnown RBP11.19□□□□□ -0.62
RFC1-214ENST00000512726 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
RFC1-214ENST00000512726 FAM177A1Q8N128 213 aaPredicted RBP11.19□□□□□ -0.62
RFC1-214ENST00000512726 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
RFC1-214ENST00000512726 CCSER2Q9H7U1 834 aa11.19□□□□□ -0.62
RFC1-214ENST00000512726 WASF2Q9Y6W5 498 aa11.19□□□□□ -0.62
RFC1-214ENST00000512726 Q6ZVU0 165 aa11.18□□□□□ -0.62
RFC1-214ENST00000512726 GPR152Q8TDT2 470 aa11.18□□□□□ -0.62
RFC1-214ENST00000512726 HSP90B1P14625 803 aaKnown RBP11.17□□□□□ -0.62
RFC1-214ENST00000512726 HIF1AQ16665 826 aa11.17□□□□□ -0.62
RFC1-214ENST00000512726 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
RFC1-214ENST00000512726 NUDT16Q96DE0 195 aaKnown RBP11.17□□□□□ -0.62
RFC1-214ENST00000512726 DNAJC25Q9H1X3 360 aa11.17□□□□□ -0.62
RFC1-214ENST00000512726 AK5Q9Y6K8 562 aa11.17□□□□□ -0.62
RFC1-214ENST00000512726 EIF1AYO14602 144 aaKnown RBP11.16□□□□□ -0.62
RFC1-214ENST00000512726 SLC19A1P41440 591 aa11.16□□□□□ -0.62
RFC1-214ENST00000512726 RHBDD1Q8TEB9 315 aa11.16□□□□□ -0.62
RFC1-214ENST00000512726 SPG7Q9UQ90 795 aa11.16□□□□□ -0.62
RFC1-214ENST00000512726 CDAN1Q8IWY9 1227 aa11.15□□□□□ -0.62
RFC1-214ENST00000512726 SLC43A3Q8NBI5 491 aa11.15□□□□□ -0.62
RFC1-214ENST00000512726 CRELD1Q96HD1 420 aa11.15□□□□□ -0.62
RFC1-214ENST00000512726 CANXP27824 592 aaKnown RBP11.14□□□□□ -0.63
RFC1-214ENST00000512726 ORC1Q13415 861 aa11.14□□□□□ -0.63
RFC1-214ENST00000512726 GNL2Q13823 731 aaKnown RBP11.14□□□□□ -0.63
RFC1-214ENST00000512726 GNASQ5JWF2 1037 aa11.14□□□□□ -0.63
RFC1-214ENST00000512726 POTEGQ6S5H5 508 aa11.14□□□□□ -0.63
RFC1-214ENST00000512726 EMID1Q96A84 441 aaPredicted RBP11.14□□□□□ -0.63
RFC1-214ENST00000512726 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
RFC1-214ENST00000512726 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
RFC1-214ENST00000512726 TANGO6Q9C0B7 1094 aa11.14□□□□□ -0.63
RFC1-214ENST00000512726 CAPN10Q9HC96 672 aa11.14□□□□□ -0.63
RFC1-214ENST00000512726 ZIC2O95409 532 aaPredicted RBP11.13□□□□□ -0.63
RFC1-214ENST00000512726 RELBQ01201 579 aa11.13□□□□□ -0.63
RFC1-214ENST00000512726 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
RFC1-214ENST00000512726 TINF2Q9BSI4 451 aa11.13□□□□□ -0.63
RFC1-214ENST00000512726 CPNE3O75131 537 aaKnown RBP11.12□□□□□ -0.63
RFC1-214ENST00000512726 MICAL2O94851 1124 aa11.12□□□□□ -0.63
RFC1-214ENST00000512726 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
RFC1-214ENST00000512726 GGNBP2Q9H3C7 697 aa11.12□□□□□ -0.63
RFC1-214ENST00000512726 EIF4BP23588 611 aaKnown RBP11.11□□□□□ -0.63
RFC1-214ENST00000512726 TXLNAP40222 546 aa11.11□□□□□ -0.63
RFC1-214ENST00000512726 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
RFC1-214ENST00000512726 SLC27A3Q5K4L6 730 aa11.11□□□□□ -0.63
RFC1-214ENST00000512726 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
RFC1-214ENST00000512726 NLRP2Q9NX02 1062 aa11.11□□□□□ -0.63
RFC1-214ENST00000512726 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.11□□□□□ -0.63
RFC1-214ENST00000512726 TGFBR3LH3BV60 316 aa11.1□□□□□ -0.63
RFC1-214ENST00000512726 GPC1P35052 558 aa11.1□□□□□ -0.63
RFC1-214ENST00000512726 PLA2G4AP47712 749 aa11.1□□□□□ -0.63
RFC1-214ENST00000512726 KLF16Q9BXK1 252 aaPredicted RBP11.1□□□□□ -0.63
RFC1-214ENST00000512726 BCS1LQ9Y276 419 aa11.1□□□□□ -0.63
RFC1-214ENST00000512726 WDR4P57081 412 aaKnown RBP11.09□□□□□ -0.63
RFC1-214ENST00000512726 SNIP1Q8TAD8 396 aaKnown RBP11.09□□□□□ -0.63
RFC1-214ENST00000512726 GRIP2Q9C0E4 1043 aa11.09□□□□□ -0.63
RFC1-214ENST00000512726 ACBD3Q9H3P7 528 aa11.09□□□□□ -0.63
RFC1-214ENST00000512726 PRKAG2Q9UGJ0 569 aa11.09□□□□□ -0.63
RFC1-214ENST00000512726 GIPC1O14908 333 aa11.08□□□□□ -0.64
RFC1-214ENST00000512726 CTSHP09668 335 aa11.08□□□□□ -0.64
RFC1-214ENST00000512726 SPRYD7Q5W111 196 aa11.08□□□□□ -0.64
RFC1-214ENST00000512726 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
RFC1-214ENST00000512726 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
RFC1-214ENST00000512726 ZFAND3Q9H8U3 227 aa11.08□□□□□ -0.64
RFC1-214ENST00000512726 FNDC3AQ9Y2H6 1198 aaKnown RBP11.08□□□□□ -0.64
RFC1-214ENST00000512726 GPC6Q9Y625 555 aaPredicted RBP11.08□□□□□ -0.64
RFC1-214ENST00000512726 A6NHS1 94 aa11.07□□□□□ -0.64
RFC1-214ENST00000512726 OPLAHO14841 1288 aa11.07□□□□□ -0.64
RFC1-214ENST00000512726 SMARCA5O60264 1052 aaPredicted RBP11.07□□□□□ -0.64
RFC1-214ENST00000512726 ATP2B1P20020 1258 aa11.07□□□□□ -0.64
RFC1-214ENST00000512726 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.07□□□□□ -0.64
RFC1-214ENST00000512726 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
RFC1-214ENST00000512726 IER5Q5VY09 327 aa11.07□□□□□ -0.64
RFC1-214ENST00000512726 ZDHHC3Q9NYG2 299 aa11.07□□□□□ -0.64
RFC1-214ENST00000512726 TATP17735 454 aaPredicted RBP11.06□□□□□ -0.64
RFC1-214ENST00000512726 FOXC1Q12948 553 aa11.06□□□□□ -0.64
RFC1-214ENST00000512726 ZNF697Q5TEC3 545 aa11.06□□□□□ -0.64
RFC1-214ENST00000512726 ZNF654Q8IZM8 581 aa11.06□□□□□ -0.64
RFC1-214ENST00000512726 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
RFC1-214ENST00000512726 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
RFC1-214ENST00000512726 XKR5Q6UX68 686 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms