RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CD33P20138 364 aa6.28□□□□□ -1.4
CHD1-207ENST00000511628 HIF1AQ16665 826 aa6.28□□□□□ -1.4
CHD1-207ENST00000511628 ACDQ96AP0 544 aa6.28□□□□□ -1.4
CHD1-207ENST00000511628 KLRG1Q96E93 195 aa6.28□□□□□ -1.4
CHD1-207ENST00000511628 RRAGCQ9HB90 399 aa6.28□□□□□ -1.4
CHD1-207ENST00000511628 GDF2Q9UK05 429 aaPredicted RBP6.28□□□□□ -1.4
CHD1-207ENST00000511628 SERPINA10Q9UK55 444 aa6.28□□□□□ -1.4
CHD1-207ENST00000511628 GPC6Q9Y625 555 aaPredicted RBP6.28□□□□□ -1.4
CHD1-207ENST00000511628 ARID3CA6NKF2 412 aa6.27□□□□□ -1.41
CHD1-207ENST00000511628 CTBSQ01459 385 aa6.27□□□□□ -1.41
CHD1-207ENST00000511628 SH3PXD2AQ5TCZ1 1133 aa6.27□□□□□ -1.41
CHD1-207ENST00000511628 C1orf53Q5VUE5 145 aa6.27□□□□□ -1.41
CHD1-207ENST00000511628 ZNF295-AS1Q8N0V1 137 aa6.27□□□□□ -1.41
CHD1-207ENST00000511628 GOLGA6L1Q8N7Z2 621 aa6.27□□□□□ -1.41
CHD1-207ENST00000511628 SCARF2Q96GP6 870 aaPredicted RBP6.27□□□□□ -1.41
CHD1-207ENST00000511628 CEP63Q96MT8 703 aa6.27□□□□□ -1.41
CHD1-207ENST00000511628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHD1-207ENST00000511628 NOVA2Q9UNW9 492 aaKnown RBP6.27□□□□□ -1.41
CHD1-207ENST00000511628 TNP2Q05952 138 aa6.26□□□□□ -1.41
CHD1-207ENST00000511628 NEUROD1Q13562 356 aa6.26□□□□□ -1.41
CHD1-207ENST00000511628 ALDH16A1Q8IZ83 802 aa6.26□□□□□ -1.41
CHD1-207ENST00000511628 GALNT6Q8NCL4 622 aa6.26□□□□□ -1.41
CHD1-207ENST00000511628 MARK1Q9P0L2 795 aa6.26□□□□□ -1.41
CHD1-207ENST00000511628 DNMT3AQ9Y6K1 912 aaPredicted RBP6.26□□□□□ -1.41
CHD1-207ENST00000511628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.25□□□□□ -1.41
CHD1-207ENST00000511628 FAM157BP0CG42 384 aa6.25□□□□□ -1.41
CHD1-207ENST00000511628 IGFBP4P22692 258 aa6.25□□□□□ -1.41
CHD1-207ENST00000511628 HIRAP54198 1017 aaPredicted RBP6.25□□□□□ -1.41
CHD1-207ENST00000511628 UBAP2LQ14157 1087 aaKnown RBP6.25□□□□□ -1.41
CHD1-207ENST00000511628 SAMD5Q5TGI4 173 aa6.25□□□□□ -1.41
CHD1-207ENST00000511628 NDFIP2Q9NV92 336 aa6.25□□□□□ -1.41
CHD1-207ENST00000511628 GGA1Q9UJY5 639 aa6.25□□□□□ -1.41
CHD1-207ENST00000511628 NEURL1BA8MQ27 555 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 PHF20L1A8MW92 1017 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 OIP5O43482 229 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 C21orf2O43822 256 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 DKK1O94907 266 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 ARHGEF15O94989 841 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 ADH6P28332 368 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 IRS1P35568 1242 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 LAMC2Q13753 1193 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 STAG2Q8N3U4 1231 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 BEND7Q8N7W2 519 aaPredicted RBP6.24□□□□□ -1.41
CHD1-207ENST00000511628 EDARADDQ8WWZ3 215 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 HSH2DQ96JZ2 352 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 C2orf49Q9BVC5 232 aaPredicted RBP6.24□□□□□ -1.41
CHD1-207ENST00000511628 C1orf115Q9H7X2 142 aa6.24□□□□□ -1.41
CHD1-207ENST00000511628 C2CD2LO14523 706 aa6.23□□□□□ -1.41
CHD1-207ENST00000511628 ARAFP10398 606 aa6.23□□□□□ -1.41
CHD1-207ENST00000511628 SUSD3Q96L08 255 aa6.23□□□□□ -1.41
CHD1-207ENST00000511628 BRD7Q9NPI1 651 aa6.23□□□□□ -1.41
CHD1-207ENST00000511628 LRRC4BQ9NT99 713 aa6.23□□□□□ -1.41
CHD1-207ENST00000511628 FOXO3O43524 673 aa6.22□□□□□ -1.41
CHD1-207ENST00000511628 PCBP4P57723 403 aaKnown RBP6.22□□□□□ -1.41
CHD1-207ENST00000511628 RTN1Q16799 776 aa6.22□□□□□ -1.41
CHD1-207ENST00000511628 FAM182BQ5T319 152 aa6.22□□□□□ -1.41
CHD1-207ENST00000511628 SLCO4C1Q6ZQN7 724 aa6.22□□□□□ -1.41
CHD1-207ENST00000511628 TMEM151AQ8N4L1 468 aa6.22□□□□□ -1.41
CHD1-207ENST00000511628 PIK3R2O00459 728 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 PRMT3O60678 531 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 GDF11O95390 407 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 ALAS2P22557 587 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 SWI5Q1ZZU3 235 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 ZNF280CQ8ND82 737 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 PBXIP1Q96AQ6 731 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 PRIMPOLQ96LW4 560 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 PNMA5Q96PV4 448 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 ARXQ96QS3 562 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 KCNH4Q9UQ05 1017 aa6.21□□□□□ -1.42
CHD1-207ENST00000511628 ACIN1Q9UKV3 1341 aaKnown RBP6.21□□□□□ -1.42
CHD1-207ENST00000511628 EPB42P16452 691 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 RASSF7Q02833 373 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 TBC1D8BQ0IIM8 1120 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 SPEM2Q0P670 501 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 KCNMA1Q12791 1236 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 SFSWAPQ12872 951 aaKnown RBP6.2□□□□□ -1.42
CHD1-207ENST00000511628 ZNF468Q5VIY5 522 aaPredicted RBP6.2□□□□□ -1.42
CHD1-207ENST00000511628 KANK3Q6NY19 840 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 BTLAQ7Z6A9 289 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 CCDC82Q8N4S0 544 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 AVENQ9NQS1 362 aaPredicted RBP6.2□□□□□ -1.42
CHD1-207ENST00000511628 STRN4Q9NRL3 753 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 MKL2Q9ULH7 1088 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 CNTNAP5Q8WYK1 1306 aa6.2□□□□□ -1.42
CHD1-207ENST00000511628 SHISA8B8ZZ34 492 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 EFSO43281 561 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 ATG7O95352 703 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 WEE1P30291 646 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 DGKZQ13574 1117 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 ELOAQ14241 798 aaKnown RBP6.19□□□□□ -1.42
CHD1-207ENST00000511628 SYT9Q86SS6 491 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 STK32AQ8WU08 396 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 IGFLR1Q9H665 355 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 KLK14Q9P0G3 267 aa6.19□□□□□ -1.42
CHD1-207ENST00000511628 EPXP11678 715 aa6.18□□□□□ -1.42
CHD1-207ENST00000511628 TYRO3Q06418 890 aa6.18□□□□□ -1.42
CHD1-207ENST00000511628 POTEAQ6S8J7 498 aa6.18□□□□□ -1.42
CHD1-207ENST00000511628 RAB44Q7Z6P3 723 aaPredicted RBP6.18□□□□□ -1.42
CHD1-207ENST00000511628 BHMTQ93088 406 aa6.18□□□□□ -1.42
CHD1-207ENST00000511628 BTBD6Q96KE9 485 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms