RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 WHAMMQ8TF30 809 aa9.96□□□□□ -0.82
GYPB-212ENST00000511198 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
GYPB-212ENST00000511198 TFIP11Q9UBB9 837 aaKnown RBP9.96□□□□□ -0.82
GYPB-212ENST00000511198 BACH1O14867 736 aa9.95□□□□□ -0.82
GYPB-212ENST00000511198 ADAMTS2O95450 1211 aa9.95□□□□□ -0.82
GYPB-212ENST00000511198 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
GYPB-212ENST00000511198 ZNF385CQ66K41 422 aaPredicted RBP9.95□□□□□ -0.82
GYPB-212ENST00000511198 RUBCNLQ9H714 662 aa9.95□□□□□ -0.82
GYPB-212ENST00000511198 MKRN1Q9UHC7 482 aaKnown RBP9.95□□□□□ -0.82
GYPB-212ENST00000511198 CFAP43Q8NDM7 1665 aa9.95□□□□□ -0.82
GYPB-212ENST00000511198 PREX1Q8TCU6 1659 aa9.95□□□□□ -0.82
GYPB-212ENST00000511198 WDR7Q9Y4E6 1490 aa9.94□□□□□ -0.82
GYPB-212ENST00000511198 EPHA4P54764 986 aa9.94□□□□□ -0.82
GYPB-212ENST00000511198 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
GYPB-212ENST00000511198 MBIPQ9NS73 344 aa9.94□□□□□ -0.82
GYPB-212ENST00000511198 SCHIP1Q9P0W5 487 aaPredicted RBP9.94□□□□□ -0.82
GYPB-212ENST00000511198 MAFBQ9Y5Q3 323 aaPredicted RBP9.94□□□□□ -0.82
GYPB-212ENST00000511198 PALM3A6NDB9 673 aaPredicted RBP9.93□□□□□ -0.82
GYPB-212ENST00000511198 ATP4AP20648 1035 aa9.93□□□□□ -0.82
GYPB-212ENST00000511198 ATP1A2P50993 1020 aa9.93□□□□□ -0.82
GYPB-212ENST00000511198 FOXK2Q01167 660 aa9.93□□□□□ -0.82
GYPB-212ENST00000511198 LBRQ14739 615 aaKnown RBP9.93□□□□□ -0.82
GYPB-212ENST00000511198 OGFOD1Q8N543 542 aa9.93□□□□□ -0.82
GYPB-212ENST00000511198 CRISPLD1Q9H336 500 aa9.93□□□□□ -0.82
GYPB-212ENST00000511198 DKK1O94907 266 aa9.92□□□□□ -0.82
GYPB-212ENST00000511198 CEBPAP49715 358 aaPredicted RBP9.92□□□□□ -0.82
GYPB-212ENST00000511198 PIP4K2BP78356 416 aa9.92□□□□□ -0.82
GYPB-212ENST00000511198 CCDC102BQ68D86 513 aa9.92□□□□□ -0.82
GYPB-212ENST00000511198 TPCN2Q8NHX9 752 aa9.92□□□□□ -0.82
GYPB-212ENST00000511198 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
GYPB-212ENST00000511198 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
GYPB-212ENST00000511198 DNAAF2Q9NVR5 837 aaKnown RBP9.92□□□□□ -0.82
GYPB-212ENST00000511198 WRNQ14191 1432 aaPredicted RBP eCLIP9.91□□□□□ -0.82
GYPB-212ENST00000511198 CSB-PGBD3P0DP91 1061 aa9.91□□□□□ -0.82
GYPB-212ENST00000511198 TNS4Q8IZW8 715 aa9.91□□□□□ -0.82
GYPB-212ENST00000511198 PGBD3Q8N328 593 aa9.91□□□□□ -0.82
GYPB-212ENST00000511198 LARGE2Q8N3Y3 721 aa9.91□□□□□ -0.82
GYPB-212ENST00000511198 AIDAQ96BJ3 306 aa9.91□□□□□ -0.82
GYPB-212ENST00000511198 CFHR5Q9BXR6 569 aa9.91□□□□□ -0.82
GYPB-212ENST00000511198 ZNF335Q9H4Z2 1342 aaPredicted RBP9.9□□□□□ -0.82
GYPB-212ENST00000511198 POTEAQ6S8J7 498 aa9.9□□□□□ -0.82
GYPB-212ENST00000511198 LYPD4Q6UWN0 246 aa9.9□□□□□ -0.82
GYPB-212ENST00000511198 SIX5Q8N196 739 aa9.9□□□□□ -0.82
GYPB-212ENST00000511198 C1orf216Q8TAB5 229 aa9.9□□□□□ -0.82
GYPB-212ENST00000511198 CABP1Q9NZU7 370 aa9.9□□□□□ -0.82
GYPB-212ENST00000511198 SIGLEC1Q9BZZ2 1709 aa9.9□□□□□ -0.83
GYPB-212ENST00000511198 IGF1RP08069 1367 aa9.89□□□□□ -0.83
GYPB-212ENST00000511198 TTC37Q6PGP7 1564 aa9.89□□□□□ -0.83
GYPB-212ENST00000511198 ARHGEF15O94989 841 aa9.89□□□□□ -0.83
GYPB-212ENST00000511198 EFHC2Q5JST6 749 aa9.89□□□□□ -0.83
GYPB-212ENST00000511198 ZDHHC1Q8WTX9 485 aa9.89□□□□□ -0.83
GYPB-212ENST00000511198 NDFIP2Q9NV92 336 aa9.89□□□□□ -0.83
GYPB-212ENST00000511198 ZNF777Q9ULD5 760 aaPredicted RBP9.89□□□□□ -0.83
GYPB-212ENST00000511198 MX2P20592 715 aa9.88□□□□□ -0.83
GYPB-212ENST00000511198 SVOPQ8N4V2 548 aa9.88□□□□□ -0.83
GYPB-212ENST00000511198 ZDHHC3Q9NYG2 299 aa9.88□□□□□ -0.83
GYPB-212ENST00000511198 PARP3Q9Y6F1 533 aa9.88□□□□□ -0.83
GYPB-212ENST00000511198 FRMPD1Q5SYB0 1578 aa9.88□□□□□ -0.83
GYPB-212ENST00000511198 M0R2N6 131 aa9.87□□□□□ -0.83
GYPB-212ENST00000511198 CELA2BP08218 269 aaPredicted RBP9.87□□□□□ -0.83
GYPB-212ENST00000511198 MLECQ14165 292 aa9.87□□□□□ -0.83
GYPB-212ENST00000511198 TEAD4Q15561 434 aa9.87□□□□□ -0.83
GYPB-212ENST00000511198 TBCELQ5QJ74 424 aa9.87□□□□□ -0.83
GYPB-212ENST00000511198 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
GYPB-212ENST00000511198 SLC9A9Q8IVB4 645 aa9.87□□□□□ -0.83
GYPB-212ENST00000511198 ZNF594Q96JF6 807 aaPredicted RBP9.87□□□□□ -0.83
GYPB-212ENST00000511198 ADAMTS8Q9UP79 889 aa9.87□□□□□ -0.83
GYPB-212ENST00000511198 BNIP3LO60238 219 aa9.86□□□□□ -0.83
GYPB-212ENST00000511198 NBPF1Q3BBV0 1214 aa9.86□□□□□ -0.83
GYPB-212ENST00000511198 CARMIL2Q6F5E8 1435 aa9.86□□□□□ -0.83
GYPB-212ENST00000511198 A0A1W2PNR3 127 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 SFI1A8K8P3 1242 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 RASA1P20936 1047 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 NOS2P35228 1153 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 TXLNAP40222 546 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 NLRP8Q86W28 1048 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 L3MBTL2Q969R5 705 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 ACDQ96AP0 544 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 ABHD17AQ96GS6 310 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 ZIC5Q96T25 663 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 ZCCHC2Q9C0B9 1178 aaKnown RBP9.85□□□□□ -0.83
GYPB-212ENST00000511198 ATXN7L1Q9ULK2 861 aaPredicted RBP9.85□□□□□ -0.83
GYPB-212ENST00000511198 PHF24Q9UPV7 400 aa9.85□□□□□ -0.83
GYPB-212ENST00000511198 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
GYPB-212ENST00000511198 UHRF1BP1Q6BDS2 1440 aa9.84□□□□□ -0.83
GYPB-212ENST00000511198 FER1L4A9Z1Z3 1794 aa9.84□□□□□ -0.83
GYPB-212ENST00000511198 LMOD1P29536 600 aaPredicted RBP9.84□□□□□ -0.83
GYPB-212ENST00000511198 CRTC2Q53ET0 693 aaPredicted RBP9.84□□□□□ -0.83
GYPB-212ENST00000511198 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
GYPB-212ENST00000511198 TSEN2Q8NCE0 465 aaKnown RBP9.84□□□□□ -0.83
GYPB-212ENST00000511198 TSPAN10Q9H1Z9 355 aaPredicted RBP9.84□□□□□ -0.83
GYPB-212ENST00000511198 HCN2Q9UL51 889 aa9.84□□□□□ -0.83
GYPB-212ENST00000511198 POGZQ7Z3K3 1410 aa9.83□□□□□ -0.84
GYPB-212ENST00000511198 TATP17735 454 aaPredicted RBP9.83□□□□□ -0.84
GYPB-212ENST00000511198 PTK7Q13308 1070 aa9.83□□□□□ -0.84
GYPB-212ENST00000511198 ARSJQ5FYB0 599 aaPredicted RBP9.83□□□□□ -0.84
GYPB-212ENST00000511198 SH3PXD2AQ5TCZ1 1133 aa9.83□□□□□ -0.84
GYPB-212ENST00000511198 FIGNL1Q6PIW4 674 aa9.83□□□□□ -0.84
GYPB-212ENST00000511198 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
GYPB-212ENST00000511198 PCDHGC4Q9Y5F7 938 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms