RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 BCORQ6W2J9 1755 aa15.96■□□□□ 0.15
CLDND1-223ENST00000511081 PRR5LQ6MZQ0 368 aa15.96■□□□□ 0.15
CLDND1-223ENST00000511081 ARHGAP27Q6ZUM4 889 aa15.96■□□□□ 0.15
CLDND1-223ENST00000511081 CARMIL3Q8ND23 1372 aa15.96■□□□□ 0.15
CLDND1-223ENST00000511081 CHL1O00533 1208 aa15.95■□□□□ 0.14
CLDND1-223ENST00000511081 CCDC146Q8IYE0 955 aa15.95■□□□□ 0.14
CLDND1-223ENST00000511081 TSPYL4Q9UJ04 414 aa15.95■□□□□ 0.14
CLDND1-223ENST00000511081 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
CLDND1-223ENST00000511081 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
CLDND1-223ENST00000511081 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
CLDND1-223ENST00000511081 H0YIN7 160 aa15.94■□□□□ 0.14
CLDND1-223ENST00000511081 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
CLDND1-223ENST00000511081 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
CLDND1-223ENST00000511081 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
CLDND1-223ENST00000511081 ANKRD31Q8N7Z5 1873 aa15.93■□□□□ 0.14
CLDND1-223ENST00000511081 DLEC1Q9Y238 1755 aa15.93■□□□□ 0.14
CLDND1-223ENST00000511081 ZNF316A6NFI3 1004 aaPredicted RBP15.93■□□□□ 0.14
CLDND1-223ENST00000511081 PDE6BP35913 854 aa15.93■□□□□ 0.14
CLDND1-223ENST00000511081 LRP10Q7Z4F1 713 aa15.93■□□□□ 0.14
CLDND1-223ENST00000511081 C2CD5Q86YS7 1000 aa15.93■□□□□ 0.14
CLDND1-223ENST00000511081 TTLL6Q8N841 843 aa15.93■□□□□ 0.14
CLDND1-223ENST00000511081 RRP7AQ9Y3A4 280 aaKnown RBP15.93■□□□□ 0.14
CLDND1-223ENST00000511081 KLRG2A4D1S0 409 aaPredicted RBP15.92■□□□□ 0.14
CLDND1-223ENST00000511081 PDIA6Q15084 440 aa15.92■□□□□ 0.14
CLDND1-223ENST00000511081 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
CLDND1-223ENST00000511081 HLFQ16534 295 aa15.92■□□□□ 0.14
CLDND1-223ENST00000511081 C1QTNF8P60827 252 aa15.91■□□□□ 0.14
CLDND1-223ENST00000511081 CNBD1Q8NA66 436 aa15.91■□□□□ 0.14
CLDND1-223ENST00000511081 TPTE2Q6XPS3 522 aa15.9■□□□□ 0.14
CLDND1-223ENST00000511081 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
CLDND1-223ENST00000511081 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
CLDND1-223ENST00000511081 SBF1O95248 1867 aa15.9■□□□□ 0.14
CLDND1-223ENST00000511081 MAP3K15Q6ZN16 1313 aa15.9■□□□□ 0.14
CLDND1-223ENST00000511081 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
CLDND1-223ENST00000511081 SRGNP10124 158 aa15.89■□□□□ 0.13
CLDND1-223ENST00000511081 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
CLDND1-223ENST00000511081 GPBP1L1Q9HC44 474 aaPredicted RBP15.89■□□□□ 0.13
CLDND1-223ENST00000511081 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLDND1-223ENST00000511081 APAF1O14727 1248 aa15.88■□□□□ 0.13
CLDND1-223ENST00000511081 MYL6BP14649 208 aa15.88■□□□□ 0.13
CLDND1-223ENST00000511081 ST5P78524 1137 aa15.88■□□□□ 0.13
CLDND1-223ENST00000511081 CCDC184Q52MB2 194 aa15.88■□□□□ 0.13
CLDND1-223ENST00000511081 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
CLDND1-223ENST00000511081 STYK1Q6J9G0 422 aa15.88■□□□□ 0.13
CLDND1-223ENST00000511081 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
CLDND1-223ENST00000511081 NUP98P52948 1817 aa15.88■□□□□ 0.13
CLDND1-223ENST00000511081 CEP350Q5VT06 3117 aa15.87■□□□□ 0.13
CLDND1-223ENST00000511081 GIGYF2Q6Y7W6 1299 aaKnown RBP15.87■□□□□ 0.13
CLDND1-223ENST00000511081 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
CLDND1-223ENST00000511081 HOXB7P09629 217 aa15.86■□□□□ 0.13
CLDND1-223ENST00000511081 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
CLDND1-223ENST00000511081 ZNF34Q8IZ26 560 aa15.86■□□□□ 0.13
CLDND1-223ENST00000511081 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLDND1-223ENST00000511081 MASTLQ96GX5 879 aa15.86■□□□□ 0.13
CLDND1-223ENST00000511081 NFKBIEO00221 500 aa15.85■□□□□ 0.13
CLDND1-223ENST00000511081 PRELPP51888 382 aa15.85■□□□□ 0.13
CLDND1-223ENST00000511081 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
CLDND1-223ENST00000511081 PROSER3Q2NL68 480 aa15.85■□□□□ 0.13
CLDND1-223ENST00000511081 KIF6Q6ZMV9 814 aa15.85■□□□□ 0.13
CLDND1-223ENST00000511081 C7orf43Q8WVR3 580 aa15.85■□□□□ 0.13
CLDND1-223ENST00000511081 CNKSR1Q969H4 720 aa15.85■□□□□ 0.13
CLDND1-223ENST00000511081 DDX21Q9NR30 783 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLDND1-223ENST00000511081 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
CLDND1-223ENST00000511081 KIF3CO14782 793 aa15.84■□□□□ 0.13
CLDND1-223ENST00000511081 NYXQ9GZU5 481 aa15.84■□□□□ 0.13
CLDND1-223ENST00000511081 SLX4Q8IY92 1834 aa15.83■□□□□ 0.12
CLDND1-223ENST00000511081 NPHP1O15259 732 aa15.83■□□□□ 0.12
CLDND1-223ENST00000511081 NPR1P16066 1061 aa15.83■□□□□ 0.12
CLDND1-223ENST00000511081 LMNB1P20700 586 aa15.83■□□□□ 0.12
CLDND1-223ENST00000511081 ZNF526Q8TF50 670 aaPredicted RBP15.83■□□□□ 0.12
CLDND1-223ENST00000511081 ZBTB3Q9H5J0 574 aa15.83■□□□□ 0.12
CLDND1-223ENST00000511081 RNF181Q9P0P0 153 aa15.83■□□□□ 0.12
CLDND1-223ENST00000511081 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
CLDND1-223ENST00000511081 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.12
CLDND1-223ENST00000511081 IBTKQ9P2D0 1353 aaPredicted RBP15.83■□□□□ 0.12
CLDND1-223ENST00000511081 C21orf2O43822 256 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 ANXA1P04083 346 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 CRY2Q49AN0 593 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 COPS6Q7L5N1 327 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 MBIPQ9NS73 344 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 UBN2Q6ZU65 1347 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 LTBP3Q9NS15 1303 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 FER1L6Q2WGJ9 1857 aa15.82■□□□□ 0.12
CLDND1-223ENST00000511081 GNAI1P63096 354 aa15.81■□□□□ 0.12
CLDND1-223ENST00000511081 RASSF7Q02833 373 aa15.81■□□□□ 0.12
CLDND1-223ENST00000511081 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
CLDND1-223ENST00000511081 CCDC27Q2M243 656 aa15.81■□□□□ 0.12
CLDND1-223ENST00000511081 RIC1Q4ADV7 1423 aa15.81■□□□□ 0.12
CLDND1-223ENST00000511081 PARP10Q53GL7 1025 aa15.81■□□□□ 0.12
CLDND1-223ENST00000511081 SLC10A5Q5PT55 438 aa15.81■□□□□ 0.12
CLDND1-223ENST00000511081 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
CLDND1-223ENST00000511081 ARFGEF2Q9Y6D5 1785 aa15.81■□□□□ 0.12
CLDND1-223ENST00000511081 CCDC88AQ3V6T2 1871 aa15.8■□□□□ 0.12
CLDND1-223ENST00000511081 FAM177BA6PVY3 158 aa15.8■□□□□ 0.12
CLDND1-223ENST00000511081 NTSR2O95665 410 aa15.8■□□□□ 0.12
CLDND1-223ENST00000511081 GPTP24298 496 aa15.8■□□□□ 0.12
CLDND1-223ENST00000511081 DUSP27Q5VZP5 1158 aa15.8■□□□□ 0.12
CLDND1-223ENST00000511081 XAGE3Q8WTP9 111 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms