RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 PIM2Q9P1W9 311 aa19.01■□□□□ 0.63
COL12A1-210ENST00000511023 ERBB4Q15303 1308 aa19■□□□□ 0.63
COL12A1-210ENST00000511023 SENP3-EIF4A1A0A087X0R7 540 aa19■□□□□ 0.63
COL12A1-210ENST00000511023 RGL2O15211 777 aa19■□□□□ 0.63
COL12A1-210ENST00000511023 ZNF853P0CG23 659 aa19■□□□□ 0.63
COL12A1-210ENST00000511023 ZNF652Q9Y2D9 606 aa19■□□□□ 0.63
COL12A1-210ENST00000511023 ANXA1P04083 346 aa18.99■□□□□ 0.63
COL12A1-210ENST00000511023 DALRD3Q5D0E6 543 aaKnown RBP18.99■□□□□ 0.63
COL12A1-210ENST00000511023 MBIPQ9NS73 344 aa18.99■□□□□ 0.63
COL12A1-210ENST00000511023 ARFGEF1Q9Y6D6 1849 aa18.99■□□□□ 0.63
COL12A1-210ENST00000511023 MAP3K15Q6ZN16 1313 aa18.99■□□□□ 0.63
COL12A1-210ENST00000511023 DLEC1Q9Y238 1755 aa18.98■□□□□ 0.63
COL12A1-210ENST00000511023 C2CD5Q86YS7 1000 aa18.98■□□□□ 0.63
COL12A1-210ENST00000511023 CNBD1Q8NA66 436 aa18.98■□□□□ 0.63
COL12A1-210ENST00000511023 NECTIN2Q92692 538 aa18.98■□□□□ 0.63
COL12A1-210ENST00000511023 BRIP1Q9BX63 1249 aa18.98■□□□□ 0.63
COL12A1-210ENST00000511023 NIP7Q9Y221 180 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL12A1-210ENST00000511023 COL11A2P13942 1736 aaPredicted RBP18.97■□□□□ 0.63
COL12A1-210ENST00000511023 ERVV-1B6SEH8 477 aa18.97■□□□□ 0.63
COL12A1-210ENST00000511023 NUP98P52948 1817 aa18.97■□□□□ 0.63
COL12A1-210ENST00000511023 ADCY9O60503 1353 aa18.96■□□□□ 0.63
COL12A1-210ENST00000511023 ARHGAP27Q6ZUM4 889 aa18.96■□□□□ 0.63
COL12A1-210ENST00000511023 NBPF5PQ86XG9 351 aaPredicted RBP18.96■□□□□ 0.63
COL12A1-210ENST00000511023 ZBTB3Q9H5J0 574 aa18.96■□□□□ 0.63
COL12A1-210ENST00000511023 IFT57Q9NWB7 429 aa18.96■□□□□ 0.63
COL12A1-210ENST00000511023 H0YIN7 160 aa18.95■□□□□ 0.62
COL12A1-210ENST00000511023 KIF6Q6ZMV9 814 aa18.95■□□□□ 0.62
COL12A1-210ENST00000511023 ATP10DQ9P241 1426 aa18.94■□□□□ 0.62
COL12A1-210ENST00000511023 PDE6BP35913 854 aa18.94■□□□□ 0.62
COL12A1-210ENST00000511023 GNAI1P63096 354 aa18.94■□□□□ 0.62
COL12A1-210ENST00000511023 FAM177BA6PVY3 158 aa18.93■□□□□ 0.62
COL12A1-210ENST00000511023 HOXB7P09629 217 aa18.93■□□□□ 0.62
COL12A1-210ENST00000511023 ST5P78524 1137 aa18.93■□□□□ 0.62
COL12A1-210ENST00000511023 CALD1Q05682 793 aaKnown RBP18.93■□□□□ 0.62
COL12A1-210ENST00000511023 DUSP27Q5VZP5 1158 aa18.93■□□□□ 0.62
COL12A1-210ENST00000511023 DDX21Q9NR30 783 aaKnown RBP eCLIP18.93■□□□□ 0.62
COL12A1-210ENST00000511023 UBN2Q6ZU65 1347 aa18.93■□□□□ 0.62
COL12A1-210ENST00000511023 NPHP1O15259 732 aa18.92■□□□□ 0.62
COL12A1-210ENST00000511023 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
COL12A1-210ENST00000511023 HDGFL1Q5TGJ6 251 aa18.92■□□□□ 0.62
COL12A1-210ENST00000511023 GIGYF2Q6Y7W6 1299 aaKnown RBP18.92■□□□□ 0.62
COL12A1-210ENST00000511023 COPS6Q7L5N1 327 aa18.92■□□□□ 0.62
COL12A1-210ENST00000511023 TTLL6Q8N841 843 aa18.92■□□□□ 0.62
COL12A1-210ENST00000511023 XAGE3Q8WTP9 111 aa18.92■□□□□ 0.62
COL12A1-210ENST00000511023 CHPF2Q9P2E5 772 aa18.92■□□□□ 0.62
COL12A1-210ENST00000511023 GPTP24298 496 aa18.91■□□□□ 0.62
COL12A1-210ENST00000511023 TPTE2Q6XPS3 522 aa18.91■□□□□ 0.62
COL12A1-210ENST00000511023 WWC1Q8IX03 1113 aa18.91■□□□□ 0.62
COL12A1-210ENST00000511023 ZNF34Q8IZ26 560 aa18.91■□□□□ 0.62
COL12A1-210ENST00000511023 PDZRN3Q9UPQ7 1066 aa18.91■□□□□ 0.62
COL12A1-210ENST00000511023 SRGNP10124 158 aa18.9■□□□□ 0.62
COL12A1-210ENST00000511023 C8orf58Q8NAV2 365 aa18.9■□□□□ 0.62
COL12A1-210ENST00000511023 ZNF622Q969S3 477 aaKnown RBP eCLIP18.9■□□□□ 0.62
COL12A1-210ENST00000511023 KLRG2A4D1S0 409 aaPredicted RBP18.89■□□□□ 0.61
COL12A1-210ENST00000511023 ELL2O00472 640 aaPredicted RBP18.89■□□□□ 0.61
COL12A1-210ENST00000511023 AIMP1Q12904 312 aaKnown RBP18.89■□□□□ 0.61
COL12A1-210ENST00000511023 SUSD4Q5VX71 490 aa18.89■□□□□ 0.61
COL12A1-210ENST00000511023 NUTM1Q86Y26 1132 aa18.89■□□□□ 0.61
COL12A1-210ENST00000511023 ABCC12Q96J65 1359 aa18.89■□□□□ 0.61
COL12A1-210ENST00000511023 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
COL12A1-210ENST00000511023 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
COL12A1-210ENST00000511023 STYK1Q6J9G0 422 aa18.88■□□□□ 0.61
COL12A1-210ENST00000511023 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
COL12A1-210ENST00000511023 NTSR2O95665 410 aa18.87■□□□□ 0.61
COL12A1-210ENST00000511023 PRELPP51888 382 aa18.87■□□□□ 0.61
COL12A1-210ENST00000511023 RASSF7Q02833 373 aa18.87■□□□□ 0.61
COL12A1-210ENST00000511023 ERFEQ4G0M1 354 aa18.87■□□□□ 0.61
COL12A1-210ENST00000511023 C9orf131Q5VYM1 1079 aa18.87■□□□□ 0.61
COL12A1-210ENST00000511023 SLX4Q8IY92 1834 aa18.87■□□□□ 0.61
COL12A1-210ENST00000511023 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
COL12A1-210ENST00000511023 MASTLQ96GX5 879 aa18.87■□□□□ 0.61
COL12A1-210ENST00000511023 IBTKQ9P2D0 1353 aaPredicted RBP18.87■□□□□ 0.61
COL12A1-210ENST00000511023 DBF4Q9UBU7 674 aaPredicted RBP18.87■□□□□ 0.61
COL12A1-210ENST00000511023 TSPYL6Q8N831 410 aa18.86■□□□□ 0.61
COL12A1-210ENST00000511023 NYXQ9GZU5 481 aa18.86■□□□□ 0.61
COL12A1-210ENST00000511023 SALL2Q9Y467 1007 aaPredicted RBP18.86■□□□□ 0.61
COL12A1-210ENST00000511023 SBF1O95248 1867 aa18.86■□□□□ 0.61
COL12A1-210ENST00000511023 NFKBIEO00221 500 aa18.85■□□□□ 0.61
COL12A1-210ENST00000511023 C21orf2O43822 256 aa18.85■□□□□ 0.61
COL12A1-210ENST00000511023 GTF2E1P29083 439 aaPredicted RBP18.85■□□□□ 0.61
COL12A1-210ENST00000511023 ZNF526Q8TF50 670 aaPredicted RBP18.85■□□□□ 0.61
COL12A1-210ENST00000511023 ZNF219Q9P2Y4 722 aaPredicted RBP18.85■□□□□ 0.61
COL12A1-210ENST00000511023 ANKRD36CQ5JPF3 1778 aa18.85■□□□□ 0.61
COL12A1-210ENST00000511023 ARFGEF2Q9Y6D5 1785 aa18.85■□□□□ 0.61
COL12A1-210ENST00000511023 CACNA1SQ13698 1873 aa18.84■□□□□ 0.61
COL12A1-210ENST00000511023 IL16Q14005 1332 aa18.84■□□□□ 0.61
COL12A1-210ENST00000511023 NPR1P16066 1061 aa18.84■□□□□ 0.61
COL12A1-210ENST00000511023 PRPF40BQ6NWY9 871 aaKnown RBP18.84■□□□□ 0.61
COL12A1-210ENST00000511023 CNKSR1Q969H4 720 aa18.84■□□□□ 0.61
COL12A1-210ENST00000511023 HYPKQ9NX55 129 aa18.84■□□□□ 0.61
COL12A1-210ENST00000511023 RIC1Q4ADV7 1423 aa18.83■□□□□ 0.61
COL12A1-210ENST00000511023 TCIRG1Q13488 830 aa18.83■□□□□ 0.6
COL12A1-210ENST00000511023 CRY2Q49AN0 593 aa18.83■□□□□ 0.6
COL12A1-210ENST00000511023 PARP10Q53GL7 1025 aa18.83■□□□□ 0.6
COL12A1-210ENST00000511023 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
COL12A1-210ENST00000511023 NLRP10Q86W26 655 aa18.83■□□□□ 0.6
COL12A1-210ENST00000511023 ANKRD13DQ6ZTN6 518 aa18.82■□□□□ 0.6
COL12A1-210ENST00000511023 PPP1R42Q7Z4L9 355 aa18.82■□□□□ 0.6
COL12A1-210ENST00000511023 PLBD2Q8NHP8 589 aa18.82■□□□□ 0.6
COL12A1-210ENST00000511023 C7orf43Q8WVR3 580 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms