RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 TAOK3Q9H2K8 898 aa19.94■□□□□ 0.78
COL1A1-212ENST00000510710 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-212ENST00000510710 SRGNP10124 158 aa19.93■□□□□ 0.78
COL1A1-212ENST00000510710 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL1A1-212ENST00000510710 COL13A1Q5TAT6 717 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-212ENST00000510710 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
COL1A1-212ENST00000510710 MASTLQ96GX5 879 aa19.93■□□□□ 0.78
COL1A1-212ENST00000510710 COL11A2P13942 1736 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-212ENST00000510710 FER1L6Q2WGJ9 1857 aa19.92■□□□□ 0.78
COL1A1-212ENST00000510710 SNRPA1P09661 255 aaKnown RBP19.92■□□□□ 0.78
COL1A1-212ENST00000510710 PRPF40BQ6NWY9 871 aaKnown RBP19.92■□□□□ 0.78
COL1A1-212ENST00000510710 NBPF5PQ86XG9 351 aaPredicted RBP19.92■□□□□ 0.78
COL1A1-212ENST00000510710 LTBP3Q9NS15 1303 aa19.92■□□□□ 0.78
COL1A1-212ENST00000510710 PRAMEF22A3QJZ6 481 aa19.91■□□□□ 0.78
COL1A1-212ENST00000510710 CLEC4GQ6UXB4 293 aa19.91■□□□□ 0.78
COL1A1-212ENST00000510710 MCM10Q7L590 875 aa19.91■□□□□ 0.78
COL1A1-212ENST00000510710 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
COL1A1-212ENST00000510710 DICER1Q9UPY3 1922 aaKnown RBP19.91■□□□□ 0.78
COL1A1-212ENST00000510710 SLX4Q8IY92 1834 aa19.9■□□□□ 0.78
COL1A1-212ENST00000510710 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
COL1A1-212ENST00000510710 DDNO94850 711 aaPredicted RBP19.89■□□□□ 0.77
COL1A1-212ENST00000510710 BCORQ6W2J9 1755 aa19.89■□□□□ 0.77
COL1A1-212ENST00000510710 CACNA1SQ13698 1873 aa19.88■□□□□ 0.77
COL1A1-212ENST00000510710 TPTE2Q6XPS3 522 aa19.88■□□□□ 0.77
COL1A1-212ENST00000510710 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
COL1A1-212ENST00000510710 DCTN1Q14203 1278 aa19.87■□□□□ 0.77
COL1A1-212ENST00000510710 CHADLQ6NUI6 762 aa19.87■□□□□ 0.77
COL1A1-212ENST00000510710 NIP7Q9Y221 180 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL1A1-212ENST00000510710 HTATSF1O43719 755 aaKnown RBP19.86■□□□□ 0.77
COL1A1-212ENST00000510710 NPR1P16066 1061 aa19.86■□□□□ 0.77
COL1A1-212ENST00000510710 TNS4Q8IZW8 715 aa19.86■□□□□ 0.77
COL1A1-212ENST00000510710 FAM177BA6PVY3 158 aa19.85■□□□□ 0.77
COL1A1-212ENST00000510710 HSPA1AP0DMV8 641 aaKnown RBP19.85■□□□□ 0.77
COL1A1-212ENST00000510710 HSPA1BP0DMV9 641 aaKnown RBP19.85■□□□□ 0.77
COL1A1-212ENST00000510710 CCDC93Q567U6 631 aa19.85■□□□□ 0.77
COL1A1-212ENST00000510710 NBPF26B4DH59 902 aa19.84■□□□□ 0.77
COL1A1-212ENST00000510710 TAF7Q15545 349 aaPredicted RBP19.84■□□□□ 0.77
COL1A1-212ENST00000510710 NBPF10Q6P3W6 841 aaKnown RBP19.84■□□□□ 0.77
COL1A1-212ENST00000510710 NBPF15Q8N660 670 aa19.84■□□□□ 0.77
COL1A1-212ENST00000510710 C7orf43Q8WVR3 580 aa19.84■□□□□ 0.77
COL1A1-212ENST00000510710 ARFGEF2Q9Y6D5 1785 aa19.84■□□□□ 0.77
COL1A1-212ENST00000510710 KLRG2A4D1S0 409 aaPredicted RBP19.83■□□□□ 0.77
COL1A1-212ENST00000510710 IQCA1LA6NCM1 817 aa19.83■□□□□ 0.77
COL1A1-212ENST00000510710 CAPN15O75808 1086 aa19.83■□□□□ 0.77
COL1A1-212ENST00000510710 POTEIP0CG38 1075 aa19.83■□□□□ 0.77
COL1A1-212ENST00000510710 POTEJP0CG39 1038 aa19.83■□□□□ 0.77
COL1A1-212ENST00000510710 GTF2E1P29083 439 aaPredicted RBP19.83■□□□□ 0.77
COL1A1-212ENST00000510710 CREBZFQ9NS37 354 aa19.83■□□□□ 0.77
COL1A1-212ENST00000510710 MIS18AQ9NYP9 233 aa19.83■□□□□ 0.77
COL1A1-212ENST00000510710 RGL2O15211 777 aa19.82■□□□□ 0.76
COL1A1-212ENST00000510710 FKBP4Q02790 459 aaKnown RBP eCLIP19.82■□□□□ 0.76
COL1A1-212ENST00000510710 NEFMP07197 916 aa19.81■□□□□ 0.76
COL1A1-212ENST00000510710 ALDH1B1P30837 517 aa19.81■□□□□ 0.76
COL1A1-212ENST00000510710 HLFQ16534 295 aa19.81■□□□□ 0.76
COL1A1-212ENST00000510710 RTKN2Q8IZC4 609 aa19.81■□□□□ 0.76
COL1A1-212ENST00000510710 ZNF277Q9NRM2 450 aaPredicted RBP19.81■□□□□ 0.76
COL1A1-212ENST00000510710 LDHDQ86WU2 507 aa19.8■□□□□ 0.76
COL1A1-212ENST00000510710 NGEFQ8N5V2 710 aa19.8■□□□□ 0.76
COL1A1-212ENST00000510710 L3MBTL3Q96JM7 780 aaPredicted RBP19.8■□□□□ 0.76
COL1A1-212ENST00000510710 MKRN1Q9UHC7 482 aaKnown RBP19.8■□□□□ 0.76
COL1A1-212ENST00000510710 OLFM4Q6UX06 510 aa19.79■□□□□ 0.76
COL1A1-212ENST00000510710 TAF1DQ9H5J8 278 aaPredicted RBP19.79■□□□□ 0.76
COL1A1-212ENST00000510710 EAPPQ56P03 285 aaPredicted RBP19.78■□□□□ 0.76
COL1A1-212ENST00000510710 PNISRQ8TF01 805 aaKnown RBP19.78■□□□□ 0.76
COL1A1-212ENST00000510710 SCN4AP35499 1836 aa19.77■□□□□ 0.76
COL1A1-212ENST00000510710 SYNE4Q8N205 404 aa19.77■□□□□ 0.76
COL1A1-212ENST00000510710 NYXQ9GZU5 481 aa19.77■□□□□ 0.76
COL1A1-212ENST00000510710 ZNF541Q9H0D2 1346 aa19.76■□□□□ 0.75
COL1A1-212ENST00000510710 IARSP41252 1262 aaKnown RBP19.76■□□□□ 0.75
COL1A1-212ENST00000510710 HACL1Q9UJ83 578 aa19.76■□□□□ 0.75
COL1A1-212ENST00000510710 CLEC11AQ9Y240 323 aa19.76■□□□□ 0.75
COL1A1-212ENST00000510710 RRP7AQ9Y3A4 280 aaKnown RBP19.76■□□□□ 0.75
COL1A1-212ENST00000510710 ERVV-1B6SEH8 477 aa19.75■□□□□ 0.75
COL1A1-212ENST00000510710 KIF6Q6ZMV9 814 aa19.75■□□□□ 0.75
COL1A1-212ENST00000510710 NUTM1Q86Y26 1132 aa19.75■□□□□ 0.75
COL1A1-212ENST00000510710 PASKQ96RG2 1323 aa19.75■□□□□ 0.75
COL1A1-212ENST00000510710 PCNTO95613 3336 aa19.74■□□□□ 0.75
COL1A1-212ENST00000510710 FZD9O00144 591 aa19.73■□□□□ 0.75
COL1A1-212ENST00000510710 EPHX2P34913 555 aa19.73■□□□□ 0.75
COL1A1-212ENST00000510710 JDP2Q8WYK2 163 aa19.73■□□□□ 0.75
COL1A1-212ENST00000510710 MAP3K15Q6ZN16 1313 aa19.73■□□□□ 0.75
COL1A1-212ENST00000510710 LAMB4A4D0S4 1761 aa19.72■□□□□ 0.75
COL1A1-212ENST00000510710 CNTNAP1P78357 1384 aa19.72■□□□□ 0.75
COL1A1-212ENST00000510710 TMEM88BA6NKF7 163 aa19.72■□□□□ 0.75
COL1A1-212ENST00000510710 ITGBL1O95965 494 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-212ENST00000510710 MYL6BP14649 208 aa19.72■□□□□ 0.75
COL1A1-212ENST00000510710 EIF4A1P60842 406 aaKnown RBP19.72■□□□□ 0.75
COL1A1-212ENST00000510710 CRY2Q49AN0 593 aa19.72■□□□□ 0.75
COL1A1-212ENST00000510710 TTLL7Q6ZT98 887 aa19.72■□□□□ 0.75
COL1A1-212ENST00000510710 PNMA8AQ86V59 439 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-212ENST00000510710 RPGRQ92834 1020 aaKnown RBP19.72■□□□□ 0.75
COL1A1-212ENST00000510710 PSMD1Q99460 953 aa19.72■□□□□ 0.75
COL1A1-212ENST00000510710 GPTP24298 496 aa19.71■□□□□ 0.75
COL1A1-212ENST00000510710 CC2D2BQ6DHV5 1058 aa19.71■□□□□ 0.75
COL1A1-212ENST00000510710 RNF123Q5XPI4 1314 aa19.71■□□□□ 0.75
COL1A1-212ENST00000510710 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
COL1A1-212ENST00000510710 ABCC12Q96J65 1359 aa19.7■□□□□ 0.74
COL1A1-212ENST00000510710 NUP98P52948 1817 aa19.7■□□□□ 0.74
COL1A1-212ENST00000510710 EIF6P56537 245 aaKnown RBP19.7■□□□□ 0.74
COL1A1-212ENST00000510710 NFE2L2Q16236 605 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms