RNA–Protein interactions for RNA: ENST00000509977.1

RETREG1-205, Transcript of reticulophagy regulator 1, humanhuman

TSL 5

Gene RETREG1, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-205ENST00000509977 DIAPH1O60610 1272 aaKnown RBP9.67□□□□□ -0.86
RETREG1-205ENST00000509977 PDE4AP27815 886 aa9.67□□□□□ -0.86
RETREG1-205ENST00000509977 POLD1P28340 1107 aa9.67□□□□□ -0.86
RETREG1-205ENST00000509977 AKAP4Q5JQC9 854 aa9.67□□□□□ -0.86
RETREG1-205ENST00000509977 RC3H1Q5TC82 1133 aaKnown RBP9.67□□□□□ -0.86
RETREG1-205ENST00000509977 POTEBQ6S5H4 581 aa9.67□□□□□ -0.86
RETREG1-205ENST00000509977 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
RETREG1-205ENST00000509977 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.66□□□□□ -0.86
RETREG1-205ENST00000509977 AK7Q96M32 723 aa9.66□□□□□ -0.86
RETREG1-205ENST00000509977 PCDHGA4Q9Y5G9 962 aa9.66□□□□□ -0.86
RETREG1-205ENST00000509977 ATP6V1AP38606 617 aa9.65□□□□□ -0.86
RETREG1-205ENST00000509977 CABP4P57796 275 aa9.65□□□□□ -0.86
RETREG1-205ENST00000509977 MTHFSDQ2M296 383 aaKnown RBP9.65□□□□□ -0.86
RETREG1-205ENST00000509977 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
RETREG1-205ENST00000509977 SLC52A2Q9HAB3 445 aa9.65□□□□□ -0.86
RETREG1-205ENST00000509977 RNMTO43148 476 aaKnown RBP9.64□□□□□ -0.87
RETREG1-205ENST00000509977 HMOX1P09601 288 aa9.64□□□□□ -0.87
RETREG1-205ENST00000509977 PPP1R15BQ5SWA1 713 aa9.64□□□□□ -0.87
RETREG1-205ENST00000509977 PAXIP1Q6ZW49 1069 aaPredicted RBP9.64□□□□□ -0.87
RETREG1-205ENST00000509977 NFATC2IPQ8NCF5 419 aa9.64□□□□□ -0.87
RETREG1-205ENST00000509977 NLGN2Q8NFZ4 835 aa9.64□□□□□ -0.87
RETREG1-205ENST00000509977 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
RETREG1-205ENST00000509977 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
RETREG1-205ENST00000509977 LGR6Q9HBX8 967 aa9.64□□□□□ -0.87
RETREG1-205ENST00000509977 CD2APQ9Y5K6 639 aa9.64□□□□□ -0.87
RETREG1-205ENST00000509977 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
RETREG1-205ENST00000509977 GNPATO15228 680 aa9.63□□□□□ -0.87
RETREG1-205ENST00000509977 RPS6KA4O75676 772 aa9.63□□□□□ -0.87
RETREG1-205ENST00000509977 NUDT7P0C024 238 aa9.63□□□□□ -0.87
RETREG1-205ENST00000509977 YY1P25490 414 aa9.63□□□□□ -0.87
RETREG1-205ENST00000509977 VARS2Q5ST30 1063 aaKnown RBP9.63□□□□□ -0.87
RETREG1-205ENST00000509977 MSL1Q68DK7 614 aa9.63□□□□□ -0.87
RETREG1-205ENST00000509977 SMIM5Q71RC9 77 aa9.63□□□□□ -0.87
RETREG1-205ENST00000509977 BRCA1P38398 1863 aaKnown RBP9.63□□□□□ -0.87
RETREG1-205ENST00000509977 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
RETREG1-205ENST00000509977 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
RETREG1-205ENST00000509977 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
RETREG1-205ENST00000509977 PHF14O94880 888 aa9.61□□□□□ -0.87
RETREG1-205ENST00000509977 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
RETREG1-205ENST00000509977 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
RETREG1-205ENST00000509977 DDX27Q96GQ7 796 aaKnown RBP9.61□□□□□ -0.87
RETREG1-205ENST00000509977 RTCBQ9Y3I0 505 aaKnown RBP9.61□□□□□ -0.87
RETREG1-205ENST00000509977 C10orf71Q711Q0 1435 aa9.61□□□□□ -0.87
RETREG1-205ENST00000509977 GYS1P13807 737 aa9.6□□□□□ -0.87
RETREG1-205ENST00000509977 YBX3P16989 372 aaKnown RBP eCLIP9.6□□□□□ -0.87
RETREG1-205ENST00000509977 CRKLP46109 303 aaKnown RBP9.6□□□□□ -0.87
RETREG1-205ENST00000509977 INTS5Q6P9B9 1019 aaKnown RBP9.6□□□□□ -0.87
RETREG1-205ENST00000509977 IL17REQ8NFR9 667 aa9.6□□□□□ -0.87
RETREG1-205ENST00000509977 GAS2L2Q8NHY3 880 aa9.6□□□□□ -0.87
RETREG1-205ENST00000509977 ARHGEF1Q92888 912 aaKnown RBP9.6□□□□□ -0.87
RETREG1-205ENST00000509977 PXDNLA1KZ92 1463 aa9.59□□□□□ -0.87
RETREG1-205ENST00000509977 SCN7AQ01118 1682 aa9.59□□□□□ -0.87
RETREG1-205ENST00000509977 DLG5Q8TDM6 1919 aa9.59□□□□□ -0.87
RETREG1-205ENST00000509977 ZNF316A6NFI3 1004 aaPredicted RBP9.59□□□□□ -0.87
RETREG1-205ENST00000509977 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
RETREG1-205ENST00000509977 CYP19A1P11511 503 aaPredicted RBP9.59□□□□□ -0.87
RETREG1-205ENST00000509977 TRAPPC3LQ5T215 181 aa9.59□□□□□ -0.87
RETREG1-205ENST00000509977 PHACTR3Q96KR7 559 aa9.59□□□□□ -0.87
RETREG1-205ENST00000509977 CFAP53Q96M91 514 aa9.59□□□□□ -0.87
RETREG1-205ENST00000509977 SOS1Q07889 1333 aaPredicted RBP9.58□□□□□ -0.88
RETREG1-205ENST00000509977 USP42Q9H9J4 1324 aaKnown RBP9.58□□□□□ -0.88
RETREG1-205ENST00000509977 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
RETREG1-205ENST00000509977 GNAT3A8MTJ3 354 aa9.58□□□□□ -0.88
RETREG1-205ENST00000509977 U2SURPO15042 1029 aaKnown RBP9.58□□□□□ -0.88
RETREG1-205ENST00000509977 FCHSD2O94868 740 aa9.58□□□□□ -0.88
RETREG1-205ENST00000509977 MMP10P09238 476 aa9.58□□□□□ -0.88
RETREG1-205ENST00000509977 MFSD10Q14728 455 aa9.58□□□□□ -0.88
RETREG1-205ENST00000509977 DNAJC10Q8IXB1 793 aa9.58□□□□□ -0.88
RETREG1-205ENST00000509977 NLGN1Q8N2Q7 840 aa9.58□□□□□ -0.88
RETREG1-205ENST00000509977 AFDNP55196 1824 aaKnown RBP9.57□□□□□ -0.88
RETREG1-205ENST00000509977 ARFGEF1Q9Y6D6 1849 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 TBC1D12O60347 775 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 PRKAR2BP31323 418 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 MMRN1Q13201 1228 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 SLC39A6Q13433 755 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 GPR162Q16538 588 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 ZNF784Q8NCA9 323 aaPredicted RBP9.57□□□□□ -0.88
RETREG1-205ENST00000509977 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 ADCY9O60503 1353 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 BCORQ6W2J9 1755 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 DLEC1Q9Y238 1755 aa9.57□□□□□ -0.88
RETREG1-205ENST00000509977 KDM3BQ7LBC6 1761 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 HEG1Q9ULI3 1381 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 GRIN3BO60391 1043 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 RFC4P35249 363 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 ZNF790Q6PG37 636 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 LHX6Q9UPM6 363 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 NUDCQ9Y266 331 aa9.56□□□□□ -0.88
RETREG1-205ENST00000509977 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
RETREG1-205ENST00000509977 COL15A1P39059 1388 aa9.55□□□□□ -0.88
RETREG1-205ENST00000509977 HTATSF1O43719 755 aaKnown RBP9.55□□□□□ -0.88
RETREG1-205ENST00000509977 TM4SF1P30408 202 aa9.55□□□□□ -0.88
RETREG1-205ENST00000509977 TGFB2P61812 414 aa9.55□□□□□ -0.88
RETREG1-205ENST00000509977 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
RETREG1-205ENST00000509977 ZNF496Q96IT1 587 aaPredicted RBP9.55□□□□□ -0.88
RETREG1-205ENST00000509977 PLEKHF1Q96S99 279 aa9.55□□□□□ -0.88
RETREG1-205ENST00000509977 ZBTB1Q9Y2K1 713 aa9.55□□□□□ -0.88
RETREG1-205ENST00000509977 U2AF1L5P0DN76 240 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms