RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 MCCD1P59942 119 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-206ENST00000509429 NIFKQ9BYG3 293 aaKnown RBP8.23□□□□□ -1.09
NIPBL-206ENST00000509429 NBPF1Q3BBV0 1214 aa8.22□□□□□ -1.09
NIPBL-206ENST00000509429 AP1G2O75843 785 aa8.21□□□□□ -1.1
NIPBL-206ENST00000509429 TGFB1P01137 390 aa8.21□□□□□ -1.1
NIPBL-206ENST00000509429 TATP17735 454 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-206ENST00000509429 TRIM66O15016 1216 aa8.2□□□□□ -1.1
NIPBL-206ENST00000509429 PTCD1O75127 700 aaKnown RBP8.2□□□□□ -1.1
NIPBL-206ENST00000509429 SPINK2P20155 84 aa8.2□□□□□ -1.1
NIPBL-206ENST00000509429 FBXO45P0C2W1 286 aa8.19□□□□□ -1.1
NIPBL-206ENST00000509429 NEUROD1Q13562 356 aa8.19□□□□□ -1.1
NIPBL-206ENST00000509429 FBXO31Q5XUX0 539 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-206ENST00000509429 ILDR2Q71H61 639 aa8.19□□□□□ -1.1
NIPBL-206ENST00000509429 SLC30A3Q99726 388 aa8.19□□□□□ -1.1
NIPBL-206ENST00000509429 ETNK1Q9HBU6 452 aa8.19□□□□□ -1.1
NIPBL-206ENST00000509429 ZDHHC3Q9NYG2 299 aa8.19□□□□□ -1.1
NIPBL-206ENST00000509429 GSC2O15499 205 aa8.18□□□□□ -1.1
NIPBL-206ENST00000509429 WNT11O96014 354 aa8.18□□□□□ -1.1
NIPBL-206ENST00000509429 INTS5Q6P9B9 1019 aaKnown RBP8.17□□□□□ -1.1
NIPBL-206ENST00000509429 SPOCD1Q6ZMY3 1216 aa8.17□□□□□ -1.1
NIPBL-206ENST00000509429 DMRTC2Q8IXT2 367 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-206ENST00000509429 DZIP1LQ8IYY4 767 aaKnown RBP8.17□□□□□ -1.1
NIPBL-206ENST00000509429 ZNF592Q92610 1267 aa8.17□□□□□ -1.1
NIPBL-206ENST00000509429 JPH1Q9HDC5 661 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-206ENST00000509429 IGLV1-40P01703 118 aa8.15□□□□□ -1.1
NIPBL-206ENST00000509429 GRIK1P39086 918 aa8.15□□□□□ -1.1
NIPBL-206ENST00000509429 FBXO11Q86XK2 927 aa8.15□□□□□ -1.1
NIPBL-206ENST00000509429 DTX1Q86Y01 620 aa8.15□□□□□ -1.1
NIPBL-206ENST00000509429 AFF1P51825 1210 aaKnown RBP8.14□□□□□ -1.11
NIPBL-206ENST00000509429 IGF2-ASQ6U949 168 aa8.14□□□□□ -1.11
NIPBL-206ENST00000509429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.14□□□□□ -1.11
NIPBL-206ENST00000509429 DTWD1Q8N5C7 304 aa8.14□□□□□ -1.11
NIPBL-206ENST00000509429 CDCA7Q9BWT1 371 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-206ENST00000509429 STAU1O95793 577 aaKnown RBP8.13□□□□□ -1.11
NIPBL-206ENST00000509429 USP17L8P0C7I0 530 aa8.13□□□□□ -1.11
NIPBL-206ENST00000509429 SPEM2Q0P670 501 aa8.13□□□□□ -1.11
NIPBL-206ENST00000509429 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
NIPBL-206ENST00000509429 ASIC4Q96FT7 647 aa8.13□□□□□ -1.11
NIPBL-206ENST00000509429 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
NIPBL-206ENST00000509429 NUDT8Q8WV74 236 aa8.12□□□□□ -1.11
NIPBL-206ENST00000509429 RAB44Q7Z6P3 723 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-206ENST00000509429 ZNF295-AS1Q8N0V1 137 aa8.1□□□□□ -1.11
NIPBL-206ENST00000509429 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
NIPBL-206ENST00000509429 ZDHHC13Q8IUH4 622 aa8.09□□□□□ -1.11
NIPBL-206ENST00000509429 RAXQ9Y2V3 346 aa8.09□□□□□ -1.11
NIPBL-206ENST00000509429 DBX1A6NMT0 343 aa8.08□□□□□ -1.12
NIPBL-206ENST00000509429 AKTIPQ9H8T0 292 aa8.08□□□□□ -1.12
NIPBL-206ENST00000509429 MSL1Q68DK7 614 aa8.07□□□□□ -1.12
NIPBL-206ENST00000509429 CCDC85AQ96PX6 553 aaPredicted RBP8.07□□□□□ -1.12
NIPBL-206ENST00000509429 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
NIPBL-206ENST00000509429 SLC6A14Q9UN76 642 aa8.07□□□□□ -1.12
NIPBL-206ENST00000509429 INHAP05111 366 aa8.06□□□□□ -1.12
NIPBL-206ENST00000509429 SMTNP53814 917 aa8.06□□□□□ -1.12
NIPBL-206ENST00000509429 ABI1Q8IZP0 508 aa8.06□□□□□ -1.12
NIPBL-206ENST00000509429 ZNF330Q9Y3S2 320 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-206ENST00000509429 USP4Q13107 963 aa8.05□□□□□ -1.12
NIPBL-206ENST00000509429 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
NIPBL-206ENST00000509429 LRRC69Q6ZNQ3 347 aa8.05□□□□□ -1.12
NIPBL-206ENST00000509429 AK7Q96M32 723 aa8.05□□□□□ -1.12
NIPBL-206ENST00000509429 NR1H3Q13133 447 aa8.04□□□□□ -1.12
NIPBL-206ENST00000509429 PSAPL1Q6NUJ1 521 aa8.04□□□□□ -1.12
NIPBL-206ENST00000509429 UBE2OQ9C0C9 1292 aaKnown RBP8.04□□□□□ -1.12
NIPBL-206ENST00000509429 STOML1Q9UBI4 398 aa8.04□□□□□ -1.12
NIPBL-206ENST00000509429 RGS9O75916 674 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-206ENST00000509429 SCNN1DP51172 638 aa8.03□□□□□ -1.12
NIPBL-206ENST00000509429 TBC1D8BQ0IIM8 1120 aa8.03□□□□□ -1.12
NIPBL-206ENST00000509429 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-206ENST00000509429 PROCA1Q8NCQ7 364 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-206ENST00000509429 CDK2AP1O14519 115 aa8.02□□□□□ -1.13
NIPBL-206ENST00000509429 ZC3H15Q8WU90 426 aaKnown RBP8.02□□□□□ -1.13
NIPBL-206ENST00000509429 NEUROD4Q9HD90 331 aa8.02□□□□□ -1.13
NIPBL-206ENST00000509429 CABP1Q9NZU7 370 aa8.02□□□□□ -1.13
NIPBL-206ENST00000509429 IQSEC3Q9UPP2 1182 aaPredicted RBP8.02□□□□□ -1.13
NIPBL-206ENST00000509429 ALX3O95076 343 aa8.01□□□□□ -1.13
NIPBL-206ENST00000509429 GDF10P55107 478 aa8.01□□□□□ -1.13
NIPBL-206ENST00000509429 PDE4DQ08499 809 aa8.01□□□□□ -1.13
NIPBL-206ENST00000509429 ERICH6Q7L0X2 663 aa8.01□□□□□ -1.13
NIPBL-206ENST00000509429 TMEM130Q8N3G9 435 aa8.01□□□□□ -1.13
NIPBL-206ENST00000509429 PRR19A6NJB7 356 aa8□□□□□ -1.13
NIPBL-206ENST00000509429 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
NIPBL-206ENST00000509429 NCANO14594 1321 aa8□□□□□ -1.13
NIPBL-206ENST00000509429 JUNBP17275 347 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-206ENST00000509429 TXLNAP40222 546 aa7.99□□□□□ -1.13
NIPBL-206ENST00000509429 NFIAQ12857 509 aa7.99□□□□□ -1.13
NIPBL-206ENST00000509429 CBLL1Q75N03 491 aa7.99□□□□□ -1.13
NIPBL-206ENST00000509429 BHMTQ93088 406 aa7.99□□□□□ -1.13
NIPBL-206ENST00000509429 IGFLR1Q9H665 355 aa7.99□□□□□ -1.13
NIPBL-206ENST00000509429 PRRG2O14669 202 aa7.98□□□□□ -1.13
NIPBL-206ENST00000509429 ZNF865P0CJ78 1059 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-206ENST00000509429 ZNF124Q15973 351 aa7.98□□□□□ -1.13
NIPBL-206ENST00000509429 CEP126Q9P2H0 1117 aa7.98□□□□□ -1.13
NIPBL-206ENST00000509429 F8W735 103 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-206ENST00000509429 DLL1O00548 723 aa7.97□□□□□ -1.13
NIPBL-206ENST00000509429 SOCS7O14512 581 aa7.97□□□□□ -1.13
NIPBL-206ENST00000509429 ITGB5P18084 799 aa7.97□□□□□ -1.13
NIPBL-206ENST00000509429 KCNQ4P56696 695 aa7.97□□□□□ -1.13
NIPBL-206ENST00000509429 MTFR1Q15390 333 aa7.97□□□□□ -1.13
NIPBL-206ENST00000509429 ZNF648Q5T619 568 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-206ENST00000509429 MRPL18Q9H0U6 180 aaKnown RBP7.97□□□□□ -1.13
NIPBL-206ENST00000509429 NAGPAQ9UK23 515 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms