RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 USP42Q9H9J4 1324 aaKnown RBP18.93■□□□□ 0.62
RNF4-213ENST00000509388 ERVV-1B6SEH8 477 aa18.92■□□□□ 0.62
RNF4-213ENST00000509388 MYH14Q7Z406 1995 aaKnown RBP18.92■□□□□ 0.62
RNF4-213ENST00000509388 CAMTA2O94983 1202 aa18.91■□□□□ 0.62
RNF4-213ENST00000509388 NLGN1Q8N2Q7 840 aa18.91■□□□□ 0.62
RNF4-213ENST00000509388 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
RNF4-213ENST00000509388 IPO8O15397 1037 aaKnown RBP18.9■□□□□ 0.62
RNF4-213ENST00000509388 BCAR3O75815 825 aa18.9■□□□□ 0.62
RNF4-213ENST00000509388 KSR2Q6VAB6 950 aa18.9■□□□□ 0.62
RNF4-213ENST00000509388 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
RNF4-213ENST00000509388 PDGFDQ9GZP0 370 aaPredicted RBP18.9■□□□□ 0.62
RNF4-213ENST00000509388 PI4KAP2A4QPH2 592 aa18.89■□□□□ 0.61
RNF4-213ENST00000509388 ZBTB7AO95365 584 aa18.89■□□□□ 0.61
RNF4-213ENST00000509388 GYS1P13807 737 aa18.89■□□□□ 0.61
RNF4-213ENST00000509388 HSP90AB3PQ58FF7 597 aa18.89■□□□□ 0.61
RNF4-213ENST00000509388 CLEC4GQ6UXB4 293 aa18.89■□□□□ 0.61
RNF4-213ENST00000509388 PI4KAP1Q8N8J0 262 aa18.89■□□□□ 0.61
RNF4-213ENST00000509388 NOB1Q9ULX3 412 aaKnown RBP18.89■□□□□ 0.61
RNF4-213ENST00000509388 PTPRCP08575 1304 aa18.89■□□□□ 0.61
RNF4-213ENST00000509388 KIF16BQ96L93 1317 aa18.89■□□□□ 0.61
RNF4-213ENST00000509388 RGL2O15211 777 aa18.88■□□□□ 0.61
RNF4-213ENST00000509388 BRPF1P55201 1214 aaPredicted RBP18.88■□□□□ 0.61
RNF4-213ENST00000509388 HLFQ16534 295 aa18.88■□□□□ 0.61
RNF4-213ENST00000509388 MSL1Q68DK7 614 aa18.88■□□□□ 0.61
RNF4-213ENST00000509388 GIGYF2Q6Y7W6 1299 aaKnown RBP18.88■□□□□ 0.61
RNF4-213ENST00000509388 MTFR1LQ9H019 292 aa18.88■□□□□ 0.61
RNF4-213ENST00000509388 MAP3K2Q9Y2U5 619 aa18.88■□□□□ 0.61
RNF4-213ENST00000509388 UBR3Q6ZT12 1888 aa18.88■□□□□ 0.61
RNF4-213ENST00000509388 NEXNQ0ZGT2 675 aa18.87■□□□□ 0.61
RNF4-213ENST00000509388 FKBP8Q14318 412 aa18.87■□□□□ 0.61
RNF4-213ENST00000509388 BICDL1Q6ZP65 573 aa18.87■□□□□ 0.61
RNF4-213ENST00000509388 API5Q9BZZ5 524 aaKnown RBP18.87■□□□□ 0.61
RNF4-213ENST00000509388 POLD1P28340 1107 aa18.86■□□□□ 0.61
RNF4-213ENST00000509388 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
RNF4-213ENST00000509388 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
RNF4-213ENST00000509388 ATF5Q9Y2D1 282 aaPredicted RBP18.86■□□□□ 0.61
RNF4-213ENST00000509388 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
RNF4-213ENST00000509388 ZKSCAN2Q63HK3 967 aa18.85■□□□□ 0.61
RNF4-213ENST00000509388 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
RNF4-213ENST00000509388 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.85■□□□□ 0.61
RNF4-213ENST00000509388 DNAAF4Q8WXU2 420 aa18.85■□□□□ 0.61
RNF4-213ENST00000509388 MYD88Q99836 296 aa18.85■□□□□ 0.61
RNF4-213ENST00000509388 NIP7Q9Y221 180 aaKnown RBP eCLIP18.85■□□□□ 0.61
RNF4-213ENST00000509388 TBC1D9BQ66K14 1250 aa18.84■□□□□ 0.61
RNF4-213ENST00000509388 ARHGAP45Q92619 1136 aa18.84■□□□□ 0.61
RNF4-213ENST00000509388 METTL22Q9BUU2 404 aaPredicted RBP18.84■□□□□ 0.61
RNF4-213ENST00000509388 PARP3Q9Y6F1 533 aa18.84■□□□□ 0.61
RNF4-213ENST00000509388 F6X3S4 739 aa18.83■□□□□ 0.6
RNF4-213ENST00000509388 NPHP1O15259 732 aa18.83■□□□□ 0.6
RNF4-213ENST00000509388 MMP10P09238 476 aa18.83■□□□□ 0.6
RNF4-213ENST00000509388 GPTP24298 496 aa18.83■□□□□ 0.6
RNF4-213ENST00000509388 NFIXQ14938 502 aa18.83■□□□□ 0.6
RNF4-213ENST00000509388 SPON1Q9HCB6 807 aa18.83■□□□□ 0.6
RNF4-213ENST00000509388 ATP5J2-PTCD1G3V325 749 aa18.82■□□□□ 0.6
RNF4-213ENST00000509388 CENPBP07199 599 aaPredicted RBP18.82■□□□□ 0.6
RNF4-213ENST00000509388 ATF7IPQ6VMQ6 1270 aa18.82■□□□□ 0.6
RNF4-213ENST00000509388 QSER1Q2KHR3 1735 aa18.82■□□□□ 0.6
RNF4-213ENST00000509388 ADCY9O60503 1353 aa18.81■□□□□ 0.6
RNF4-213ENST00000509388 GTF2E1P29083 439 aaPredicted RBP18.81■□□□□ 0.6
RNF4-213ENST00000509388 PARP10Q53GL7 1025 aa18.81■□□□□ 0.6
RNF4-213ENST00000509388 ZNF34Q8IZ26 560 aa18.81■□□□□ 0.6
RNF4-213ENST00000509388 TUBGCP6Q96RT7 1819 aa18.81■□□□□ 0.6
RNF4-213ENST00000509388 FAM177BA6PVY3 158 aa18.8■□□□□ 0.6
RNF4-213ENST00000509388 MS4A1P11836 297 aa18.8■□□□□ 0.6
RNF4-213ENST00000509388 TM4SF1P30408 202 aa18.8■□□□□ 0.6
RNF4-213ENST00000509388 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
RNF4-213ENST00000509388 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
RNF4-213ENST00000509388 SERPINB2P05120 415 aa18.79■□□□□ 0.6
RNF4-213ENST00000509388 TPTE2Q6XPS3 522 aa18.79■□□□□ 0.6
RNF4-213ENST00000509388 NBPF5PQ86XG9 351 aaPredicted RBP18.79■□□□□ 0.6
RNF4-213ENST00000509388 LINS1Q8NG48 757 aa18.79■□□□□ 0.6
RNF4-213ENST00000509388 ISCA1Q9BUE6 129 aa18.79■□□□□ 0.6
RNF4-213ENST00000509388 SRCIN1Q9C0H9 1055 aa18.79■□□□□ 0.6
RNF4-213ENST00000509388 CARMIL3Q8ND23 1372 aa18.79■□□□□ 0.6
RNF4-213ENST00000509388 C4AP0C0L4 1744 aa18.78■□□□□ 0.6
RNF4-213ENST00000509388 ATP10DQ9P241 1426 aa18.78■□□□□ 0.6
RNF4-213ENST00000509388 TRIM27P14373 513 aa18.78■□□□□ 0.6
RNF4-213ENST00000509388 TRIM28Q13263 835 aaKnown RBP18.78■□□□□ 0.6
RNF4-213ENST00000509388 NLRP10Q86W26 655 aa18.78■□□□□ 0.6
RNF4-213ENST00000509388 CCDC191Q8NCU4 936 aa18.78■□□□□ 0.6
RNF4-213ENST00000509388 CLUAP1Q96AJ1 413 aa18.78■□□□□ 0.6
RNF4-213ENST00000509388 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
RNF4-213ENST00000509388 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
RNF4-213ENST00000509388 CWC25Q9NXE8 425 aaPredicted RBP18.78■□□□□ 0.6
RNF4-213ENST00000509388 POLRMTO00411 1230 aaKnown RBP18.77■□□□□ 0.6
RNF4-213ENST00000509388 CCT4P50991 539 aaKnown RBP18.77■□□□□ 0.6
RNF4-213ENST00000509388 DDR1Q08345 913 aa18.77■□□□□ 0.6
RNF4-213ENST00000509388 CWF19L2Q2TBE0 894 aaKnown RBP18.77■□□□□ 0.6
RNF4-213ENST00000509388 BEND3Q5T5X7 828 aa18.77■□□□□ 0.6
RNF4-213ENST00000509388 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
RNF4-213ENST00000509388 CACNA1FO60840 1977 aa18.76■□□□□ 0.59
RNF4-213ENST00000509388 PLIN1O60240 522 aa18.76■□□□□ 0.59
RNF4-213ENST00000509388 SUSD4Q5VX71 490 aa18.76■□□□□ 0.59
RNF4-213ENST00000509388 DZIP1LQ8IYY4 767 aaKnown RBP18.76■□□□□ 0.59
RNF4-213ENST00000509388 CNBD1Q8NA66 436 aa18.76■□□□□ 0.59
RNF4-213ENST00000509388 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
RNF4-213ENST00000509388 CASZ1Q86V15 1759 aa18.76■□□□□ 0.59
RNF4-213ENST00000509388 UBN2Q6ZU65 1347 aa18.75■□□□□ 0.59
RNF4-213ENST00000509388 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
RNF4-213ENST00000509388 ALDH1L1O75891 902 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms