RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 C16orf71Q8IYS4 520 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 IL17RAQ96F46 866 aa11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 MLH3Q9UHC1 1453 aa11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 F13A1P00488 732 aa11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 ORC3Q9UBD5 711 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 ABCC4O15439 1325 aa11.82□□□□□ -0.52
PDGFRA-207ENST00000509092 SKILP12757 684 aa11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 NUP62CLQ9H1M0 184 aa11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 SUFUQ9UMX1 484 aa11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 CASTP20810 708 aaKnown RBP11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 SMC1AQ14683 1233 aaKnown RBP11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 ANO6Q4KMQ2 910 aa11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 LEKR1Q6ZMV7 388 aa11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 CEP89Q96ST8 783 aa11.81□□□□□ -0.52
PDGFRA-207ENST00000509092 STX6O43752 255 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 CPP00450 1065 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 LMAN1P49257 510 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 OTUD7AQ8TE49 926 aaPredicted RBP11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 FAM135BQ49AJ0 1406 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 EIF3CLB5ME19 914 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 RPS6KA5O75582 802 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 TPM1P09493 284 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 HSP90B1P14625 803 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 CCZ1BP86790 482 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 CCZ1P86791 482 aaPredicted RBP11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 SNW1Q13573 536 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 HSP90AB3PQ58FF7 597 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 KIF24Q5T7B8 1368 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 MMS22LQ6ZRQ5 1243 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 EIF3CQ99613 913 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 TRMT1Q9NXH9 659 aaKnown RBP11.8□□□□□ -0.52
PDGFRA-207ENST00000509092 SSH2Q76I76 1423 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 TBC1D8O95759 1140 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 TUBB4AP04350 444 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 ATP6V1AP38606 617 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 UBXN4Q92575 508 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 ADAM21Q9UKJ8 722 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 PALD1Q9ULE6 856 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 PTPRTO14522 1441 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 TDO2P48775 406 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 CORO7P57737 925 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 SARM1Q6SZW1 724 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 MRFAP1L1Q96HT8 127 aa11.79□□□□□ -0.52
PDGFRA-207ENST00000509092 CCDC69A6NI79 296 aa11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 SASH3O75995 380 aa11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 SEC31AO94979 1220 aaKnown RBP11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 SYT1P21579 422 aa11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 E2F4Q16254 413 aa11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 ZSCAN16Q9H4T2 348 aaPredicted RBP11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 ARID5BQ14865 1188 aa11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 CCDC158Q5M9N0 1113 aa11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 ANKRD20A12PQ8NF67 263 aa11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 ESYT1Q9BSJ8 1104 aa11.78□□□□□ -0.52
PDGFRA-207ENST00000509092 CCDC196A0A1B0GTZ2 297 aa11.77□□□□□ -0.52
PDGFRA-207ENST00000509092 MAP2K2P36507 400 aa11.77□□□□□ -0.52
PDGFRA-207ENST00000509092 NBPF20Q3BBV1 942 aa11.77□□□□□ -0.52
PDGFRA-207ENST00000509092 RBM43Q6ZSC3 357 aaKnown RBP11.77□□□□□ -0.52
PDGFRA-207ENST00000509092 RPAINQ86UA6 219 aa11.77□□□□□ -0.52
PDGFRA-207ENST00000509092 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.52
PDGFRA-207ENST00000509092 TNMDQ9H2S6 317 aa11.77□□□□□ -0.52
PDGFRA-207ENST00000509092 DIP2CQ9Y2E4 1556 aa11.77□□□□□ -0.53
PDGFRA-207ENST00000509092 TTC21BQ7Z4L5 1316 aa11.77□□□□□ -0.53
PDGFRA-207ENST00000509092 CAVIN2O95810 425 aa11.77□□□□□ -0.53
PDGFRA-207ENST00000509092 DNM1Q05193 864 aaKnown RBP11.77□□□□□ -0.53
PDGFRA-207ENST00000509092 CC2D1AQ6P1N0 951 aaPredicted RBP11.77□□□□□ -0.53
PDGFRA-207ENST00000509092 SBNO2Q9Y2G9 1366 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 ARHGEF40Q8TER5 1519 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 ZNF165P49910 485 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 SRRTQ9BXP5 876 aaKnown RBP11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 CCDC189A1A4V9 331 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 TADA3O75528 432 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 EFCAB13Q8IY85 973 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 ANKRD44Q8N8A2 993 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 UPF3BQ9BZI7 483 aaKnown RBP11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 OSBPL3Q9H4L5 887 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 RAI14Q9P0K7 980 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 MKRN1Q9UHC7 482 aaKnown RBP11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 ATP10DQ9P241 1426 aa11.76□□□□□ -0.53
PDGFRA-207ENST00000509092 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 EFCAB8A8MWE9 144 aa11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 HAP1P54257 671 aaPredicted RBP11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 TRDNQ13061 729 aa11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 ZRSR1Q15695 479 aaKnown RBP11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 CAMK4Q16566 473 aa11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 CCDC34Q96HJ3 373 aa11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 LIG1P18858 919 aa11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 DNAJC21Q5F1R6 531 aaKnown RBP11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 CKAP2LQ8IYA6 745 aa11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 PPP1R13BQ96KQ4 1090 aa11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 DDX19AQ9NUU7 478 aaKnown RBP11.75□□□□□ -0.53
PDGFRA-207ENST00000509092 SMC3Q9UQE7 1217 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms