RNA–Protein interactions for RNA: ENST00000508855.5

CCNH-206, Transcript of cyclin H, human

TSL 1 (best) BASIC

Gene CCNH, Length 2,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-206	ENST00000508855	TRAK1	Q9UPV9	953 aa		5	□□□□□ -1.61
CCNH-206	ENST00000508855	YEATS2	Q9ULM3	1422 aa		5	□□□□□ -1.61
CCNH-206	ENST00000508855	SPATA31D1	Q6ZQQ2	1576 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	PIK3R4	Q99570	1358 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	DIAPH1	O60610	1272 aa	Known RBP	4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	ATP6V1A	P38606	617 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	RGS3	P49796	1198 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	ATF7IP	Q6VMQ6	1270 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	SCUBE3	Q8IX30	993 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	SMC5	Q8IY18	1101 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	NECTIN2	Q92692	538 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	SNX21	Q969T3	373 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	CHMP5	Q9NZZ3	219 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	LAS1L	Q9Y4W2	734 aa	Known RBP	4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	FAM135B	Q49AJ0	1406 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	NLRP1	Q9C000	1473 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855		A0A1W2PP64	1363 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	FDX1	P10109	184 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	GNAI1	P63096	354 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	MORN1	Q5T089	497 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	FAM43A	Q8N2R8	423 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	GOLGA2P5	Q9HBQ8	144 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	COG6	Q9Y2V7	657 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	ALK	Q9UM73	1620 aa		4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	EDC4	Q6P2E9	1401 aa	Known RBP	4.99	□□□□□ -1.61
CCNH-206	ENST00000508855	TMPO	P42166	694 aa	Known RBP	4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	HSCB	Q8IWL3	235 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	TSC1	Q92574	1164 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	PLEKHF1	Q96S99	279 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	SLC12A5	Q9H2X9	1139 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	SMC4	Q9NTJ3	1288 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	PTCH1	Q13635	1447 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	SOS1	Q07889	1333 aa	Predicted RBP	4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	C6orf229	H3BNL8	230 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	IGHD	P01880	384 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	TJAP1	Q5JTD0	557 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	GGT6	Q6P531	493 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	FRAT1	Q92837	279 aa	Predicted RBP	4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	POM121	Q96HA1	1249 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	CHMP4A	Q9BY43	222 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	API5	Q9BZZ5	524 aa	Known RBP	4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	PRDM9	Q9NQV7	894 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	IFT57	Q9NWB7	429 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	POGK	Q9P215	609 aa		4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	CPSF1	Q10570	1443 aa	Known RBP	4.98	□□□□□ -1.61
CCNH-206	ENST00000508855	MON2	Q7Z3U7	1717 aa		4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	TECPR2	O15040	1411 aa		4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	RBM25	P49756	843 aa	Known RBP	4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	CLK2	P49760	499 aa	Known RBP	4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	SRPK2	P78362	688 aa	Known RBP	4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	USP19	O94966	1318 aa		4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	LRRC7	Q96NW7	1537 aa		4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	ITSN1	Q15811	1721 aa		4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	BMP2KL	Q5H9B9	411 aa		4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	PANK1	Q8TE04	598 aa		4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	GBP4	Q96PP9	640 aa		4.97	□□□□□ -1.61
CCNH-206	ENST00000508855	CPS1	P31327	1500 aa		4.96	□□□□□ -1.61
CCNH-206	ENST00000508855	SETD1A	O15047	1707 aa	Known RBP	4.96	□□□□□ -1.61
CCNH-206	ENST00000508855	AKAP12	Q02952	1782 aa		4.96	□□□□□ -1.61
CCNH-206	ENST00000508855	CD163L1	Q9NR16	1453 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	GOLGA6L22	H0YM25	854 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	ADAM23	O75077	832 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	NUCB1	Q02818	461 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	C22orf23	Q9BZE7	217 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	NRK	Q7Z2Y5	1582 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	MYO5B	Q9ULV0	1848 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	NCOA3	Q9Y6Q9	1424 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	NUTM2E	B1AL46	878 aa	Predicted RBP	4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	EPB41L2	O43491	1005 aa	Known RBP	4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	RIPK4	P57078	832 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	IDI1	Q13907	227 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	SKIV2L	Q15477	1246 aa	Known RBP	4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	NFE2L2	Q16236	605 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	SH3D19	Q5HYK7	790 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	CASC1	Q6TDU7	716 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	ZBTB40	Q9NUA8	1239 aa		4.96	□□□□□ -1.62
CCNH-206	ENST00000508855	PPEF1	O14829	653 aa	Predicted RBP	4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	FYB1	O15117	783 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	SPTLC1	O15269	473 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	ZPR1	O75312	459 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	TRIM27	P14373	513 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	MRE11	P49959	708 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	RASSF7	Q02833	373 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	ITPRIP	Q8IWB1	547 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855		Q8N3U1	123 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	ANTXR1	Q9H6X2	564 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	RIMBP3C	A6NJZ7	1639 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	RIMBP3B	A6NNM3	1639 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	RIMBP3	Q9UFD9	1639 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	KIAA0232	Q92628	1395 aa		4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	IBTK	Q9P2D0	1353 aa	Predicted RBP	4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	CFAP65	Q6ZU64	1925 aa	Known RBP	4.95	□□□□□ -1.62
CCNH-206	ENST00000508855	GOLGA6L3	A6NEY3	463 aa		4.94	□□□□□ -1.62

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