RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 NISCHQ9Y2I1 1504 aa8.47□□□□□ -1.05
PDLIM5-211ENST00000508531 PALM3A6NDB9 673 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 SFI1A8K8P3 1242 aa8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 EFSO43281 561 aa8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 GRIN2CQ14957 1233 aa8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 CHSY3Q70JA7 882 aa8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 LARGE2Q8N3Y3 721 aa8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 RHPN1Q8TCX5 695 aa8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 NEUROD4Q9HD90 331 aa8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 AVENQ9NQS1 362 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-211ENST00000508531 KRBA1A5PL33 1030 aa8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 PSMA6P60900 246 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 LAMC2Q13753 1193 aa8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 ZNF468Q5VIY5 522 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 SIX5Q8N196 739 aa8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 C7orf43Q8WVR3 580 aa8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 TFIP11Q9UBB9 837 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 HCN4Q9Y3Q4 1203 aa8.45□□□□□ -1.06
PDLIM5-211ENST00000508531 LOC100996750A0A140TA64 210 aa8.44□□□□□ -1.06
PDLIM5-211ENST00000508531 M0R2N6 131 aa8.44□□□□□ -1.06
PDLIM5-211ENST00000508531 GNB5O14775 395 aa8.44□□□□□ -1.06
PDLIM5-211ENST00000508531 DGKGP49619 791 aa8.44□□□□□ -1.06
PDLIM5-211ENST00000508531 KRTAP4-6Q9BYQ5 205 aa8.44□□□□□ -1.06
PDLIM5-211ENST00000508531 CHMP3Q9Y3E7 222 aa8.44□□□□□ -1.06
PDLIM5-211ENST00000508531 DKK1O94907 266 aa8.43□□□□□ -1.06
PDLIM5-211ENST00000508531 PROCP04070 461 aa8.43□□□□□ -1.06
PDLIM5-211ENST00000508531 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
PDLIM5-211ENST00000508531 RBM19Q9Y4C8 960 aaKnown RBP8.43□□□□□ -1.06
PDLIM5-211ENST00000508531 MAFBQ9Y5Q3 323 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-211ENST00000508531 GPC6Q9Y625 555 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-211ENST00000508531 RASA1P20936 1047 aa8.42□□□□□ -1.06
PDLIM5-211ENST00000508531 SFSWAPQ12872 951 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-211ENST00000508531 SYT9Q86SS6 491 aa8.42□□□□□ -1.06
PDLIM5-211ENST00000508531 ALYREFQ86V81 257 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-211ENST00000508531 HSH2DQ96JZ2 352 aa8.42□□□□□ -1.06
PDLIM5-211ENST00000508531 PIK3R2O00459 728 aa8.41□□□□□ -1.06
PDLIM5-211ENST00000508531 PPP1R12BO60237 982 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-211ENST00000508531 C1orf53Q5VUE5 145 aa8.41□□□□□ -1.06
PDLIM5-211ENST00000508531 C21orf2O43822 256 aa8.4□□□□□ -1.06
PDLIM5-211ENST00000508531 HIRAP54198 1017 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-211ENST00000508531 POTEAQ6S8J7 498 aa8.4□□□□□ -1.06
PDLIM5-211ENST00000508531 CALR3Q96L12 384 aaKnown RBP8.4□□□□□ -1.06
PDLIM5-211ENST00000508531 SLC30A3Q99726 388 aa8.4□□□□□ -1.06
PDLIM5-211ENST00000508531 ZNF280CQ8ND82 737 aa8.39□□□□□ -1.07
PDLIM5-211ENST00000508531 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
PDLIM5-211ENST00000508531 ATAD2Q6PL18 1390 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 ELOA3CA0A087WX78 387 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 ELOA3DA6NLF2 546 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 LGR5O75473 907 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 SEC13P55735 322 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 ELOA3BQ3SY89 546 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 ELOA3Q8NG57 546 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 SCG3Q8WXD2 468 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 NGLY1Q96IV0 654 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 SUSD3Q96L08 255 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 PPP1R12CQ9BZL4 782 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 BRD7Q9NPI1 651 aa8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 NOP53Q9NZM5 478 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-211ENST00000508531 ALAS2P22557 587 aa8.37□□□□□ -1.07
PDLIM5-211ENST00000508531 CRTC2Q53ET0 693 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-211ENST00000508531 RAB44Q7Z6P3 723 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-211ENST00000508531 ALDH16A1Q8IZ83 802 aa8.37□□□□□ -1.07
PDLIM5-211ENST00000508531 ANKIB1Q9P2G1 1089 aa8.37□□□□□ -1.07
PDLIM5-211ENST00000508531 A6NJR5 290 aa8.36□□□□□ -1.07
PDLIM5-211ENST00000508531 SIN3BO75182 1162 aa8.36□□□□□ -1.07
PDLIM5-211ENST00000508531 TYRO3Q06418 890 aa8.36□□□□□ -1.07
PDLIM5-211ENST00000508531 SPEM2Q0P670 501 aa8.36□□□□□ -1.07
PDLIM5-211ENST00000508531 TRIM11Q96F44 468 aa8.36□□□□□ -1.07
PDLIM5-211ENST00000508531 HINFPQ9BQA5 517 aa8.36□□□□□ -1.07
PDLIM5-211ENST00000508531 C2orf49Q9BVC5 232 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-211ENST00000508531 C1QTNF9BB2RNN3 333 aa8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 ADAM23O75077 832 aa8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 BAG6P46379 1132 aa8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 DPYDQ12882 1025 aa8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 PTK7Q13308 1070 aa8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 KANK4Q5T7N3 995 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 STAG2Q8N3U4 1231 aa8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 MDFIQ99750 246 aa8.35□□□□□ -1.07
PDLIM5-211ENST00000508531 ABCC9O60706 1549 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L10C9JJH3 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L12C9JPN9 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L21D6R901 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 LMOD1P29536 600 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 PLVAPQ9BX97 442 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 KCNH4Q9UQ05 1017 aa8.34□□□□□ -1.07
PDLIM5-211ENST00000508531 ADARB2-AS1A8MUL3 147 aa8.33□□□□□ -1.08
PDLIM5-211ENST00000508531 CHRNA4P43681 627 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms