RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 FLIIQ13045 1269 aa13.1□□□□□ -0.31
HTT-204ENST00000508321 HSP90AB3PQ58FF7 597 aa13.1□□□□□ -0.31
HTT-204ENST00000508321 IBTKQ9P2D0 1353 aaPredicted RBP13.09□□□□□ -0.31
HTT-204ENST00000508321 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
HTT-204ENST00000508321 CAMTA2O94983 1202 aa13.09□□□□□ -0.31
HTT-204ENST00000508321 PIP4K2AP48426 406 aaPredicted RBP13.09□□□□□ -0.31
HTT-204ENST00000508321 RARSP54136 660 aaKnown RBP13.09□□□□□ -0.31
HTT-204ENST00000508321 COPS6Q7L5N1 327 aa13.09□□□□□ -0.31
HTT-204ENST00000508321 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
HTT-204ENST00000508321 XAGE3Q8WTP9 111 aa13.09□□□□□ -0.31
HTT-204ENST00000508321 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
HTT-204ENST00000508321 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
HTT-204ENST00000508321 NRXN2Q9P2S2 1712 aa13.09□□□□□ -0.31
HTT-204ENST00000508321 MSH5O43196 834 aa13.08□□□□□ -0.32
HTT-204ENST00000508321 ANXA1P04083 346 aa13.08□□□□□ -0.32
HTT-204ENST00000508321 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
HTT-204ENST00000508321 GYS1P13807 737 aa13.07□□□□□ -0.32
HTT-204ENST00000508321 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
HTT-204ENST00000508321 USPL1Q5W0Q7 1092 aa13.07□□□□□ -0.32
HTT-204ENST00000508321 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
HTT-204ENST00000508321 MRPL50Q8N5N7 158 aaKnown RBP13.07□□□□□ -0.32
HTT-204ENST00000508321 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
HTT-204ENST00000508321 TBC1D2BQ9UPU7 963 aa13.07□□□□□ -0.32
HTT-204ENST00000508321 LAMB2P55268 1798 aa13.07□□□□□ -0.32
HTT-204ENST00000508321 ADCY9O60503 1353 aa13.07□□□□□ -0.32
HTT-204ENST00000508321 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
HTT-204ENST00000508321 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
HTT-204ENST00000508321 KSR2Q6VAB6 950 aa13.06□□□□□ -0.32
HTT-204ENST00000508321 GIGYF2Q6Y7W6 1299 aaKnown RBP13.06□□□□□ -0.32
HTT-204ENST00000508321 TTLL7Q6ZT98 887 aa13.06□□□□□ -0.32
HTT-204ENST00000508321 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
HTT-204ENST00000508321 RCAN3Q9UKA8 241 aa13.06□□□□□ -0.32
HTT-204ENST00000508321 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
HTT-204ENST00000508321 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
HTT-204ENST00000508321 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
HTT-204ENST00000508321 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
HTT-204ENST00000508321 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
HTT-204ENST00000508321 ARXQ96QS3 562 aa13.05□□□□□ -0.32
HTT-204ENST00000508321 API5Q9BZZ5 524 aaKnown RBP13.05□□□□□ -0.32
HTT-204ENST00000508321 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
HTT-204ENST00000508321 SRP68Q9UHB9 627 aaKnown RBP13.05□□□□□ -0.32
HTT-204ENST00000508321 TCERG1O14776 1098 aaKnown RBP13.04□□□□□ -0.32
HTT-204ENST00000508321 POLD1P28340 1107 aa13.04□□□□□ -0.32
HTT-204ENST00000508321 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
HTT-204ENST00000508321 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
HTT-204ENST00000508321 BCL2L12Q9HB09 334 aa13.04□□□□□ -0.32
HTT-204ENST00000508321 PI4KAP2A4QPH2 592 aa13.03□□□□□ -0.32
HTT-204ENST00000508321 FKBP8Q14318 412 aa13.03□□□□□ -0.32
HTT-204ENST00000508321 G2E3Q7L622 706 aa13.03□□□□□ -0.32
HTT-204ENST00000508321 PI4KAP1Q8N8J0 262 aa13.03□□□□□ -0.32
HTT-204ENST00000508321 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.03□□□□□ -0.32
HTT-204ENST00000508321 DNAAF4Q8WXU2 420 aa13.03□□□□□ -0.32
HTT-204ENST00000508321 SPON1Q9HCB6 807 aa13.03□□□□□ -0.32
HTT-204ENST00000508321 RIC1Q4ADV7 1423 aa13.03□□□□□ -0.32
HTT-204ENST00000508321 MS4A1P11836 297 aa13.02□□□□□ -0.33
HTT-204ENST00000508321 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.33
HTT-204ENST00000508321 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
HTT-204ENST00000508321 ZKSCAN2Q63HK3 967 aa13.02□□□□□ -0.33
HTT-204ENST00000508321 SMIM5Q71RC9 77 aa13.02□□□□□ -0.33
HTT-204ENST00000508321 SETDB2Q96T68 719 aa13.02□□□□□ -0.33
HTT-204ENST00000508321 METTL22Q9BUU2 404 aaPredicted RBP13.02□□□□□ -0.33
HTT-204ENST00000508321 PDGFDQ9GZP0 370 aaPredicted RBP13.02□□□□□ -0.33
HTT-204ENST00000508321 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
HTT-204ENST00000508321 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
HTT-204ENST00000508321 BCAR3O75815 825 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 ZBTB7AO95365 584 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 MMP10P09238 476 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 NFIXQ14938 502 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 HLFQ16534 295 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 TBC1D9BQ66K14 1250 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 ZNF34Q8IZ26 560 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 LINS1Q8NG48 757 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 ISCA1Q9BUE6 129 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 NIP7Q9Y221 180 aaKnown RBP eCLIP13.01□□□□□ -0.33
HTT-204ENST00000508321 ABCC4O15439 1325 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 C10orf71Q711Q0 1435 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 MYH3P11055 1940 aa13.01□□□□□ -0.33
HTT-204ENST00000508321 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
HTT-204ENST00000508321 POLRMTO00411 1230 aaKnown RBP13□□□□□ -0.33
HTT-204ENST00000508321 TM4SF1P30408 202 aa13□□□□□ -0.33
HTT-204ENST00000508321 MSL1Q68DK7 614 aa13□□□□□ -0.33
HTT-204ENST00000508321 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
HTT-204ENST00000508321 CCDC191Q8NCU4 936 aa13□□□□□ -0.33
HTT-204ENST00000508321 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
HTT-204ENST00000508321 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
HTT-204ENST00000508321 PARP3Q9Y6F1 533 aa13□□□□□ -0.33
HTT-204ENST00000508321 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
HTT-204ENST00000508321 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
HTT-204ENST00000508321 ALDH1L1O75891 902 aa12.99□□□□□ -0.33
HTT-204ENST00000508321 TRIM27P14373 513 aa12.99□□□□□ -0.33
HTT-204ENST00000508321 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
HTT-204ENST00000508321 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
HTT-204ENST00000508321 DDR1Q08345 913 aa12.99□□□□□ -0.33
HTT-204ENST00000508321 MYD88Q99836 296 aa12.99□□□□□ -0.33
HTT-204ENST00000508321 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
HTT-204ENST00000508321 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
HTT-204ENST00000508321 NBPF5PQ86XG9 351 aaPredicted RBP12.98□□□□□ -0.33
HTT-204ENST00000508321 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
HTT-204ENST00000508321 CNBD1Q8NA66 436 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms