RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 BICDL1Q6ZP65 573 aa12.49□□□□□ -0.41
UBE2D3-223ENST00000508249 ZNF622Q969S3 477 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE2D3-223ENST00000508249 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
UBE2D3-223ENST00000508249 SRGNP10124 158 aa12.48□□□□□ -0.41
UBE2D3-223ENST00000508249 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
UBE2D3-223ENST00000508249 RNMTO43148 476 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-223ENST00000508249 IL13P35225 146 aa12.47□□□□□ -0.41
UBE2D3-223ENST00000508249 FMR1Q06787 632 aaKnown RBP eCLIP12.47□□□□□ -0.41
UBE2D3-223ENST00000508249 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
UBE2D3-223ENST00000508249 MAP1SQ66K74 1059 aaPredicted RBP12.47□□□□□ -0.41
UBE2D3-223ENST00000508249 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
UBE2D3-223ENST00000508249 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
UBE2D3-223ENST00000508249 RNF123Q5XPI4 1314 aa12.46□□□□□ -0.41
UBE2D3-223ENST00000508249 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-223ENST00000508249 PDE6BP35913 854 aa12.46□□□□□ -0.41
UBE2D3-223ENST00000508249 DEFB115Q30KQ5 88 aa12.46□□□□□ -0.41
UBE2D3-223ENST00000508249 STYK1Q6J9G0 422 aa12.46□□□□□ -0.41
UBE2D3-223ENST00000508249 OLFM4Q6UX06 510 aa12.46□□□□□ -0.41
UBE2D3-223ENST00000508249 PDZRN3Q9UPQ7 1066 aa12.46□□□□□ -0.41
UBE2D3-223ENST00000508249 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
UBE2D3-223ENST00000508249 EPHX2P34913 555 aa12.45□□□□□ -0.42
UBE2D3-223ENST00000508249 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-223ENST00000508249 CCDC85CA6NKD9 419 aa12.44□□□□□ -0.42
UBE2D3-223ENST00000508249 MAP2K1Q02750 393 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-223ENST00000508249 CNTROBQ8N137 903 aa12.44□□□□□ -0.42
UBE2D3-223ENST00000508249 HACL1Q9UJ83 578 aa12.44□□□□□ -0.42
UBE2D3-223ENST00000508249 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 FZD9O00144 591 aa12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 MORC1Q86VD1 984 aa12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 CNKSR1Q969H4 720 aa12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 DDX21Q9NR30 783 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 ZNF277Q9NRM2 450 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 TSKSQ9UJT2 592 aa12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
UBE2D3-223ENST00000508249 COL3A1P02461 1466 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 KLRG2A4D1S0 409 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 PER1O15534 1290 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 FKBP4Q02790 459 aaKnown RBP eCLIP12.42□□□□□ -0.422e-9■■□□□ 12.2
UBE2D3-223ENST00000508249 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 CYP4F22Q6NT55 531 aa12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 SLC51AQ86UW1 340 aa12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 MASTLQ96GX5 879 aa12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 ZNF496Q96IT1 587 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 CAPNS2Q96L46 248 aa12.42□□□□□ -0.42
UBE2D3-223ENST00000508249 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
UBE2D3-223ENST00000508249 MTHFSDQ2M296 383 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-223ENST00000508249 SOGA3Q5TF21 947 aa12.41□□□□□ -0.42
UBE2D3-223ENST00000508249 CST9Q5W186 159 aa12.41□□□□□ -0.42
UBE2D3-223ENST00000508249 MCOLN1Q9GZU1 580 aa12.41□□□□□ -0.42
UBE2D3-223ENST00000508249 MKI67P46013 3256 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-223ENST00000508249 A0A087WZG4 1122 aa12.4□□□□□ -0.42
UBE2D3-223ENST00000508249 IL6STP40189 918 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-223ENST00000508249 SCNN1DP51172 638 aa12.4□□□□□ -0.42
UBE2D3-223ENST00000508249 ABT1Q9ULW3 272 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-223ENST00000508249 TRAF5O00463 557 aa12.39□□□□□ -0.43
UBE2D3-223ENST00000508249 AOC2O75106 756 aa12.39□□□□□ -0.43
UBE2D3-223ENST00000508249 PNMA8AQ86V59 439 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-223ENST00000508249 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
UBE2D3-223ENST00000508249 NUP98P52948 1817 aa12.39□□□□□ -0.43
UBE2D3-223ENST00000508249 HTTP42858 3142 aa12.38□□□□□ -0.43
UBE2D3-223ENST00000508249 STARD3NLO95772 234 aa12.38□□□□□ -0.43
UBE2D3-223ENST00000508249 A1BGP04217 495 aa12.38□□□□□ -0.43
UBE2D3-223ENST00000508249 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-223ENST00000508249 GPC2Q8N158 579 aa12.38□□□□□ -0.43
UBE2D3-223ENST00000508249 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
UBE2D3-223ENST00000508249 HMOX1P09601 288 aa12.37□□□□□ -0.43
UBE2D3-223ENST00000508249 NPR1P16066 1061 aa12.37□□□□□ -0.43
UBE2D3-223ENST00000508249 ST5P78524 1137 aa12.37□□□□□ -0.43
UBE2D3-223ENST00000508249 ZNF790Q6PG37 636 aa12.37□□□□□ -0.43
UBE2D3-223ENST00000508249 GPR101Q96P66 508 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-223ENST00000508249 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
UBE2D3-223ENST00000508249 CEMIPQ8WUJ3 1361 aa12.37□□□□□ -0.43
UBE2D3-223ENST00000508249 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
UBE2D3-223ENST00000508249 EPS15P42566 896 aa12.36□□□□□ -0.43
UBE2D3-223ENST00000508249 PIP4K2AP48426 406 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-223ENST00000508249 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
UBE2D3-223ENST00000508249 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-223ENST00000508249 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
UBE2D3-223ENST00000508249 LAMB2P55268 1798 aa12.35□□□□□ -0.43
UBE2D3-223ENST00000508249 KCNQ3O43525 872 aa12.35□□□□□ -0.43
UBE2D3-223ENST00000508249 PSMD1Q99460 953 aa12.35□□□□□ -0.43
UBE2D3-223ENST00000508249 BRCA2P51587 3418 aa12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 PRAMEF22A3QJZ6 481 aa12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 MAP2K2P36507 400 aa12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 ECE1P42892 770 aa12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 CC2D1BQ5T0F9 858 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 SAPCD2Q86UD0 394 aa12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 DZIP3Q86Y13 1208 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 ZIC5Q96T25 663 aa12.34□□□□□ -0.43
UBE2D3-223ENST00000508249 GRM1Q13255 1194 aa12.33□□□□□ -0.44
UBE2D3-223ENST00000508249 CRY2Q49AN0 593 aa12.33□□□□□ -0.44
UBE2D3-223ENST00000508249 NBPF5PQ86XG9 351 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-223ENST00000508249 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
UBE2D3-223ENST00000508249 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
UBE2D3-223ENST00000508249 CENPFP49454 3210 aa12.32□□□□□ -0.44
UBE2D3-223ENST00000508249 DUOX1Q9NRD9 1551 aa12.32□□□□□ -0.44
UBE2D3-223ENST00000508249 BRPF1P55201 1214 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms