RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 ADAMTS7Q9UKP4 1686 aa10.68□□□□□ -0.7
UBE2D3-222ENST00000508238 MRC1P22897 1456 aa10.68□□□□□ -0.7
UBE2D3-222ENST00000508238 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
UBE2D3-222ENST00000508238 U2SURPO15042 1029 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-222ENST00000508238 PTCD1O75127 700 aaKnown RBP10.67□□□□□ -0.7
UBE2D3-222ENST00000508238 TMEM92Q6UXU6 159 aa10.67□□□□□ -0.7
UBE2D3-222ENST00000508238 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
UBE2D3-222ENST00000508238 NLGN1Q8N2Q7 840 aa10.67□□□□□ -0.7
UBE2D3-222ENST00000508238 NLGN2Q8NFZ4 835 aa10.67□□□□□ -0.7
UBE2D3-222ENST00000508238 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
UBE2D3-222ENST00000508238 VIRMAQ69YN4 1812 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-222ENST00000508238 KIF3CO14782 793 aa10.66□□□□□ -0.7
UBE2D3-222ENST00000508238 GPR162Q16538 588 aa10.66□□□□□ -0.7
UBE2D3-222ENST00000508238 ARHGEF1Q92888 912 aaKnown RBP10.66□□□□□ -0.7
UBE2D3-222ENST00000508238 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
UBE2D3-222ENST00000508238 CICQ96RK0 1608 aaPredicted RBP10.66□□□□□ -0.7
UBE2D3-222ENST00000508238 GNAT3A8MTJ3 354 aa10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 GRIN3BO60391 1043 aa10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 FCHSD2O94868 740 aa10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 CRKLP46109 303 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 FOXK1P85037 733 aa10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 CNGB1Q14028 1251 aaPredicted RBP10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 INTS5Q6P9B9 1019 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 IL17REQ8NFR9 667 aa10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 RSPH6AQ9H0K4 717 aa10.65□□□□□ -0.7
UBE2D3-222ENST00000508238 MMP10P09238 476 aa10.64□□□□□ -0.71
UBE2D3-222ENST00000508238 GYS1P13807 737 aa10.64□□□□□ -0.71
UBE2D3-222ENST00000508238 RFC4P35249 363 aa10.64□□□□□ -0.71
UBE2D3-222ENST00000508238 CAMK2BQ13554 666 aa10.64□□□□□ -0.71
UBE2D3-222ENST00000508238 PHACTR3Q96KR7 559 aa10.64□□□□□ -0.71
UBE2D3-222ENST00000508238 SCUBE2Q9NQ36 999 aa10.64□□□□□ -0.71
UBE2D3-222ENST00000508238 CYP19A1P11511 503 aaPredicted RBP10.63□□□□□ -0.71
UBE2D3-222ENST00000508238 PRKAR2BP31323 418 aa10.63□□□□□ -0.71
UBE2D3-222ENST00000508238 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
UBE2D3-222ENST00000508238 DNAJC10Q8IXB1 793 aa10.63□□□□□ -0.71
UBE2D3-222ENST00000508238 PLPP6Q8IY26 295 aa10.63□□□□□ -0.71
UBE2D3-222ENST00000508238 CEMIPQ8WUJ3 1361 aa10.63□□□□□ -0.71
UBE2D3-222ENST00000508238 U2AF1L5P0DN76 240 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-222ENST00000508238 YBX3P16989 372 aaKnown RBP eCLIP10.62□□□□□ -0.71
UBE2D3-222ENST00000508238 U2AF1Q01081 240 aaKnown RBP eCLIP10.62□□□□□ -0.712e-12■□□□□ 11.1
UBE2D3-222ENST00000508238 CCDC87Q9NVE4 849 aa10.62□□□□□ -0.71
UBE2D3-222ENST00000508238 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
UBE2D3-222ENST00000508238 KCPQ6ZWJ8 1503 aa10.62□□□□□ -0.71
UBE2D3-222ENST00000508238 TJP1Q07157 1748 aa10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 USP42Q9H9J4 1324 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 HTATSF1O43719 755 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 TGFB2P61812 414 aa10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 TEFQ10587 303 aa10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 ZNF790Q6PG37 636 aa10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 ZNF784Q8NCA9 323 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 FAM163AQ96GL9 167 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 TEX13AQ9BXU3 409 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 KIF13BQ9NQT8 1826 aa10.61□□□□□ -0.71
UBE2D3-222ENST00000508238 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-222ENST00000508238 UBR2Q8IWV8 1755 aa10.6□□□□□ -0.71
UBE2D3-222ENST00000508238 STARD3NLO95772 234 aa10.6□□□□□ -0.71
UBE2D3-222ENST00000508238 TTC5Q8N0Z6 440 aa10.6□□□□□ -0.71
UBE2D3-222ENST00000508238 ZNF496Q96IT1 587 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-222ENST00000508238 SIPA1L3O60292 1781 aaPredicted RBP10.6□□□□□ -0.71
UBE2D3-222ENST00000508238 C4AP0C0L4 1744 aa10.59□□□□□ -0.71
UBE2D3-222ENST00000508238 TM4SF1P30408 202 aa10.59□□□□□ -0.71
UBE2D3-222ENST00000508238 RALBP1Q15311 655 aa10.59□□□□□ -0.71
UBE2D3-222ENST00000508238 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
UBE2D3-222ENST00000508238 PARP3Q9Y6F1 533 aa10.59□□□□□ -0.71
UBE2D3-222ENST00000508238 HEG1Q9ULI3 1381 aa10.58□□□□□ -0.72
UBE2D3-222ENST00000508238 ZPR1O75312 459 aa10.58□□□□□ -0.72
UBE2D3-222ENST00000508238 EIF5P55010 431 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-222ENST00000508238 EMILIN3Q9NT22 766 aa10.58□□□□□ -0.72
UBE2D3-222ENST00000508238 SRP68Q9UHB9 627 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-222ENST00000508238 ZBTB1Q9Y2K1 713 aa10.58□□□□□ -0.72
UBE2D3-222ENST00000508238 C10orf71Q711Q0 1435 aa10.58□□□□□ -0.72
UBE2D3-222ENST00000508238 BTBD11A6QL63 1104 aa10.57□□□□□ -0.72
UBE2D3-222ENST00000508238 DDR1Q08345 913 aa10.57□□□□□ -0.72
UBE2D3-222ENST00000508238 RTF1Q92541 710 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-222ENST00000508238 FMNL2Q96PY5 1086 aa10.57□□□□□ -0.72
UBE2D3-222ENST00000508238 PLEKHF1Q96S99 279 aa10.57□□□□□ -0.72
UBE2D3-222ENST00000508238 ARIH1Q9Y4X5 557 aaPredicted RBP10.57□□□□□ -0.72
UBE2D3-222ENST00000508238 PXDNLA1KZ92 1463 aa10.56□□□□□ -0.72
UBE2D3-222ENST00000508238 A0A087WZG4 1122 aa10.56□□□□□ -0.72
UBE2D3-222ENST00000508238 POLRMTO00411 1230 aaKnown RBP10.56□□□□□ -0.72
UBE2D3-222ENST00000508238 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
UBE2D3-222ENST00000508238 PNNQ9H307 717 aaKnown RBP10.56□□□□□ -0.72
UBE2D3-222ENST00000508238 COL15A1P39059 1388 aa10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 A0A0G2JLW4 131 aa10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 KCNQ3O43525 872 aa10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 KCNA3P22001 575 aa10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 CANXP27824 592 aaKnown RBP10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 IL6STP40189 918 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 TAF7Q15545 349 aaPredicted RBP10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 MCM10Q7L590 875 aa10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 BCL2L12Q9HB09 334 aa10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 KIAA1551Q9HCM1 1747 aa10.55□□□□□ -0.72
UBE2D3-222ENST00000508238 DPYSL4O14531 572 aa10.54□□□□□ -0.72
UBE2D3-222ENST00000508238 NEFMP07197 916 aa10.54□□□□□ -0.72
UBE2D3-222ENST00000508238 SNRPA1P09661 255 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-222ENST00000508238 DPEP1P16444 411 aa10.54□□□□□ -0.72
UBE2D3-222ENST00000508238 DDX10Q13206 875 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-222ENST00000508238 NFIXQ14938 502 aa10.54□□□□□ -0.72
UBE2D3-222ENST00000508238 LCE2DQ5TA82 110 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms