RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 NEXNQ0ZGT2 675 aa22.05■■□□□ 1.12
RNF4-209ENST00000507784 SF3B2Q13435 895 aaKnown RBP22.05■■□□□ 1.12
RNF4-209ENST00000507784 MYD88Q99836 296 aa22.05■■□□□ 1.12
RNF4-209ENST00000507784 LRRC4BQ9NT99 713 aa22.05■■□□□ 1.12
RNF4-209ENST00000507784 ARFGEF2Q9Y6D5 1785 aa22.04■■□□□ 1.12
RNF4-209ENST00000507784 PXDNLA1KZ92 1463 aa22.04■■□□□ 1.12
RNF4-209ENST00000507784 EIF5P55010 431 aaKnown RBP22.04■■□□□ 1.12
RNF4-209ENST00000507784 RC3H1Q5TC82 1133 aaKnown RBP22.04■■□□□ 1.12
RNF4-209ENST00000507784 DZIP3Q86Y13 1208 aaKnown RBP22.04■■□□□ 1.12
RNF4-209ENST00000507784 BEND3Q5T5X7 828 aa22.03■■□□□ 1.12
RNF4-209ENST00000507784 AK7Q96M32 723 aa22.03■■□□□ 1.12
RNF4-209ENST00000507784 METTL22Q9BUU2 404 aaPredicted RBP22.03■■□□□ 1.12
RNF4-209ENST00000507784 TBC1D2BQ9UPU7 963 aa22.03■■□□□ 1.12
RNF4-209ENST00000507784 ZBTB7BO15156 539 aaPredicted RBP22.02■■□□□ 1.12
RNF4-209ENST00000507784 GNPATO15228 680 aa22.02■■□□□ 1.12
RNF4-209ENST00000507784 C4BP0C0L5 1744 aa22.02■■□□□ 1.12
RNF4-209ENST00000507784 N4BP2Q86UW6 1770 aaPredicted RBP22.02■■□□□ 1.11
RNF4-209ENST00000507784 NUP188Q5SRE5 1749 aa22.01■■□□□ 1.11
RNF4-209ENST00000507784 A0A087WZG4 1122 aa22.01■■□□□ 1.11
RNF4-209ENST00000507784 RPS6KA4O75676 772 aa22.01■■□□□ 1.11
RNF4-209ENST00000507784 HMGB2P26583 209 aaKnown RBP22.01■■□□□ 1.11
RNF4-209ENST00000507784 CCDC136Q96JN2 1154 aa22.01■■□□□ 1.11
RNF4-209ENST00000507784 MAP3K15Q6ZN16 1313 aa22.01■■□□□ 1.11
RNF4-209ENST00000507784 ALDH1L1O75891 902 aa22■■□□□ 1.11
RNF4-209ENST00000507784 AAMPQ13685 434 aa22■■□□□ 1.11
RNF4-209ENST00000507784 CWF19L2Q2TBE0 894 aaKnown RBP22■■□□□ 1.11
RNF4-209ENST00000507784 B4GALNT3Q6L9W6 998 aa22■■□□□ 1.11
RNF4-209ENST00000507784 PROM2Q8N271 834 aa22■■□□□ 1.11
RNF4-209ENST00000507784 LINS1Q8NG48 757 aa22■■□□□ 1.11
RNF4-209ENST00000507784 RTCBQ9Y3I0 505 aaKnown RBP22■■□□□ 1.11
RNF4-209ENST00000507784 AFDNP55196 1824 aaKnown RBP22■■□□□ 1.11
RNF4-209ENST00000507784 ATP10DQ9P241 1426 aa21.99■■□□□ 1.11
RNF4-209ENST00000507784 ATP5J2-PTCD1G3V325 749 aa21.99■■□□□ 1.11
RNF4-209ENST00000507784 SMIM5Q71RC9 77 aa21.99■■□□□ 1.11
RNF4-209ENST00000507784 COL15A1P39059 1388 aa21.99■■□□□ 1.11
RNF4-209ENST00000507784 EN1Q05925 392 aaPredicted RBP21.98■■□□□ 1.11
RNF4-209ENST00000507784 MEIS3Q99687 375 aa21.98■■□□□ 1.11
RNF4-209ENST00000507784 C1orf115Q9H7X2 142 aa21.98■■□□□ 1.11
RNF4-209ENST00000507784 ZBTB40Q9NUA8 1239 aa21.98■■□□□ 1.11
RNF4-209ENST00000507784 PHF14O94880 888 aa21.97■■□□□ 1.11
RNF4-209ENST00000507784 BAG6P46379 1132 aa21.97■■□□□ 1.11
RNF4-209ENST00000507784 HLFQ16534 295 aa21.97■■□□□ 1.11
RNF4-209ENST00000507784 C9orf78Q9NZ63 289 aaPredicted RBP21.97■■□□□ 1.11
RNF4-209ENST00000507784 NEURL1BA8MQ27 555 aa21.96■■□□□ 1.11
RNF4-209ENST00000507784 ERVV-1B6SEH8 477 aa21.96■■□□□ 1.11
RNF4-209ENST00000507784 IGKV5-2P06315 115 aa21.96■■□□□ 1.11
RNF4-209ENST00000507784 GNAI3P08754 354 aa21.96■■□□□ 1.11
RNF4-209ENST00000507784 TCIRG1Q13488 830 aa21.96■■□□□ 1.11
RNF4-209ENST00000507784 EZH2Q15910 746 aaKnown RBP21.96■■□□□ 1.11
RNF4-209ENST00000507784 GIGYF2Q6Y7W6 1299 aaKnown RBP21.96■■□□□ 1.11
RNF4-209ENST00000507784 NUP98P52948 1817 aa21.96■■□□□ 1.11
RNF4-209ENST00000507784 HSP90AB3PQ58FF7 597 aa21.95■■□□□ 1.1
RNF4-209ENST00000507784 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.1
RNF4-209ENST00000507784 RGPD3A6NKT7 1758 aaPredicted RBP21.94■■□□□ 1.1
RNF4-209ENST00000507784 RGPD4Q7Z3J3 1758 aa21.94■■□□□ 1.1
RNF4-209ENST00000507784 UBTFL1P0CB47 393 aaPredicted RBP21.94■■□□□ 1.1
RNF4-209ENST00000507784 USP44Q9H0E7 712 aa21.94■■□□□ 1.1
RNF4-209ENST00000507784 CAMTA2O94983 1202 aa21.93■■□□□ 1.1
RNF4-209ENST00000507784 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
RNF4-209ENST00000507784 CAMKK2Q96RR4 588 aa21.93■■□□□ 1.1
RNF4-209ENST00000507784 PCDHB15Q9Y5E8 787 aa21.93■■□□□ 1.1
RNF4-209ENST00000507784 ZPR1O75312 459 aa21.92■■□□□ 1.1
RNF4-209ENST00000507784 GNAI2P04899 355 aa21.92■■□□□ 1.1
RNF4-209ENST00000507784 GPTP24298 496 aa21.92■■□□□ 1.1
RNF4-209ENST00000507784 RFC4P35249 363 aa21.92■■□□□ 1.1
RNF4-209ENST00000507784 GCKRQ14397 625 aa21.92■■□□□ 1.1
RNF4-209ENST00000507784 DEFB132Q7Z7B7 95 aa21.92■■□□□ 1.1
RNF4-209ENST00000507784 ISCA1Q9BUE6 129 aa21.92■■□□□ 1.1
RNF4-209ENST00000507784 CWC25Q9NXE8 425 aaPredicted RBP21.92■■□□□ 1.1
RNF4-209ENST00000507784 ANKRD36CQ5JPF3 1778 aa21.92■■□□□ 1.1
RNF4-209ENST00000507784 GRM8O00222 908 aa21.91■■□□□ 1.1
RNF4-209ENST00000507784 USPL1Q5W0Q7 1092 aa21.91■■□□□ 1.1
RNF4-209ENST00000507784 JARID2Q92833 1246 aaPredicted RBP21.91■■□□□ 1.1
RNF4-209ENST00000507784 NARFQ9UHQ1 456 aa21.91■■□□□ 1.1
RNF4-209ENST00000507784 ZNF652Q9Y2D9 606 aa21.91■■□□□ 1.1
RNF4-209ENST00000507784 UBR3Q6ZT12 1888 aa21.91■■□□□ 1.1
RNF4-209ENST00000507784 NBPF7P0C2Y1 421 aaPredicted RBP21.9■■□□□ 1.1
RNF4-209ENST00000507784 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
RNF4-209ENST00000507784 CCDC125Q86Z20 511 aa21.9■■□□□ 1.1
RNF4-209ENST00000507784 CCDC191Q8NCU4 936 aa21.9■■□□□ 1.1
RNF4-209ENST00000507784 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
RNF4-209ENST00000507784 SRP68Q9UHB9 627 aaKnown RBP21.9■■□□□ 1.1
RNF4-209ENST00000507784 BCORQ6W2J9 1755 aa21.89■■□□□ 1.1
RNF4-209ENST00000507784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.89■■□□□ 1.09
RNF4-209ENST00000507784 ZNF827Q17R98 1081 aa21.89■■□□□ 1.09
RNF4-209ENST00000507784 HDAC5Q9UQL6 1122 aa21.89■■□□□ 1.09
RNF4-209ENST00000507784 LRRFIP2Q9Y608 721 aaKnown RBP21.89■■□□□ 1.09
RNF4-209ENST00000507784 ADRA2BP18089 450 aa21.88■■□□□ 1.09
RNF4-209ENST00000507784 SSFA2P28290 1259 aa21.88■■□□□ 1.09
RNF4-209ENST00000507784 AKT1S1Q96B36 256 aa21.88■■□□□ 1.09
RNF4-209ENST00000507784 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
RNF4-209ENST00000507784 MSH5O43196 834 aa21.87■■□□□ 1.09
RNF4-209ENST00000507784 RTL5Q5HYW3 569 aaPredicted RBP21.87■■□□□ 1.09
RNF4-209ENST00000507784 ZNF34Q8IZ26 560 aa21.87■■□□□ 1.09
RNF4-209ENST00000507784 C4AP0C0L4 1744 aa21.86■■□□□ 1.09
RNF4-209ENST00000507784 FAM177BA6PVY3 158 aa21.86■■□□□ 1.09
RNF4-209ENST00000507784 IGHDP01880 384 aa21.86■■□□□ 1.09
RNF4-209ENST00000507784 TRIM28Q13263 835 aaKnown RBP21.86■■□□□ 1.09
RNF4-209ENST00000507784 CLEC4GQ6UXB4 293 aa21.86■■□□□ 1.09
RNF4-209ENST00000507784 BICDL1Q6ZP65 573 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms