RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PLBD2Q8NHP8 589 aa25.6■■□□□ 1.69
USP53-203ENST00000507597 FKBP5Q13451 457 aaPredicted RBP25.59■■□□□ 1.69
USP53-203ENST00000507597 USPL1Q5W0Q7 1092 aa25.59■■□□□ 1.69
USP53-203ENST00000507597 PHAXQ9H814 394 aaKnown RBP25.59■■□□□ 1.69
USP53-203ENST00000507597 PTPRCP08575 1304 aa25.59■■□□□ 1.69
USP53-203ENST00000507597 CACNA1FO60840 1977 aa25.58■■□□□ 1.69
USP53-203ENST00000507597 PSDA5PKW4 1024 aaPredicted RBP25.58■■□□□ 1.69
USP53-203ENST00000507597 RCAN3Q9UKA8 241 aa25.58■■□□□ 1.69
USP53-203ENST00000507597 CAMTA2O94983 1202 aa25.57■■□□□ 1.68
USP53-203ENST00000507597 TTLL7Q6ZT98 887 aa25.57■■□□□ 1.68
USP53-203ENST00000507597 MTFR1LQ9H019 292 aa25.57■■□□□ 1.68
USP53-203ENST00000507597 NEXNQ0ZGT2 675 aa25.56■■□□□ 1.68
USP53-203ENST00000507597 KSR2Q6VAB6 950 aa25.56■■□□□ 1.68
USP53-203ENST00000507597 GIGYF2Q6Y7W6 1299 aaKnown RBP25.56■■□□□ 1.68
USP53-203ENST00000507597 AMIGO3Q86WK7 504 aa25.56■■□□□ 1.68
USP53-203ENST00000507597 SMIM5Q71RC9 77 aa25.55■■□□□ 1.68
USP53-203ENST00000507597 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.55■■□□□ 1.68
USP53-203ENST00000507597 BCL2L13Q9BXK5 485 aa25.55■■□□□ 1.68
USP53-203ENST00000507597 ZBTB3Q9H5J0 574 aa25.55■■□□□ 1.68
USP53-203ENST00000507597 SRP68Q9UHB9 627 aaKnown RBP25.55■■□□□ 1.68
USP53-203ENST00000507597 GYS1P13807 737 aa25.54■■□□□ 1.68
USP53-203ENST00000507597 ARHGAP45Q92619 1136 aa25.54■■□□□ 1.68
USP53-203ENST00000507597 API5Q9BZZ5 524 aaKnown RBP25.54■■□□□ 1.68
USP53-203ENST00000507597 POLD1P28340 1107 aa25.53■■□□□ 1.68
USP53-203ENST00000507597 PI4KAP2A4QPH2 592 aa25.52■■□□□ 1.68
USP53-203ENST00000507597 G2E3Q7L622 706 aa25.52■■□□□ 1.68
USP53-203ENST00000507597 PI4KAP1Q8N8J0 262 aa25.52■■□□□ 1.68
USP53-203ENST00000507597 SETDB2Q96T68 719 aa25.52■■□□□ 1.68
USP53-203ENST00000507597 MS4A1P11836 297 aa25.51■■□□□ 1.67
USP53-203ENST00000507597 NOB1Q9ULX3 412 aaKnown RBP25.51■■□□□ 1.67
USP53-203ENST00000507597 TCIRG1Q13488 830 aa25.5■■□□□ 1.67
USP53-203ENST00000507597 PARP10Q53GL7 1025 aa25.5■■□□□ 1.67
USP53-203ENST00000507597 DNAAF4Q8WXU2 420 aa25.5■■□□□ 1.67
USP53-203ENST00000507597 TUBGCP6Q96RT7 1819 aa25.5■■□□□ 1.67
USP53-203ENST00000507597 SPON1Q9HCB6 807 aa25.5■■□□□ 1.67
USP53-203ENST00000507597 MAP3K2Q9Y2U5 619 aa25.5■■□□□ 1.67
USP53-203ENST00000507597 BCAR3O75815 825 aa25.49■■□□□ 1.67
USP53-203ENST00000507597 FKBP8Q14318 412 aa25.49■■□□□ 1.67
USP53-203ENST00000507597 FRAT1Q92837 279 aaPredicted RBP25.49■■□□□ 1.67
USP53-203ENST00000507597 METTL22Q9BUU2 404 aaPredicted RBP25.49■■□□□ 1.67
USP53-203ENST00000507597 PARP3Q9Y6F1 533 aa25.49■■□□□ 1.67
USP53-203ENST00000507597 ZBTB7AO95365 584 aa25.48■■□□□ 1.67
USP53-203ENST00000507597 HLFQ16534 295 aa25.48■■□□□ 1.67
USP53-203ENST00000507597 ZKSCAN2Q63HK3 967 aa25.48■■□□□ 1.67
USP53-203ENST00000507597 NIP7Q9Y221 180 aaKnown RBP eCLIP25.48■■□□□ 1.67
USP53-203ENST00000507597 NPHP1O15259 732 aa25.47■■□□□ 1.67
USP53-203ENST00000507597 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
USP53-203ENST00000507597 PPP1R42Q7Z4L9 355 aa25.47■■□□□ 1.67
USP53-203ENST00000507597 BCL2L12Q9HB09 334 aa25.47■■□□□ 1.67
USP53-203ENST00000507597 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
USP53-203ENST00000507597 PDGFDQ9GZP0 370 aaPredicted RBP25.46■■□□□ 1.67
USP53-203ENST00000507597 NYXQ9GZU5 481 aa25.46■■□□□ 1.67
USP53-203ENST00000507597 ATP10DQ9P241 1426 aa25.46■■□□□ 1.67
USP53-203ENST00000507597 TM4SF1P30408 202 aa25.45■■□□□ 1.66
USP53-203ENST00000507597 TRIM28Q13263 835 aaKnown RBP25.45■■□□□ 1.66
USP53-203ENST00000507597 TBC1D9BQ66K14 1250 aa25.45■■□□□ 1.66
USP53-203ENST00000507597 MSL1Q68DK7 614 aa25.45■■□□□ 1.66
USP53-203ENST00000507597 ATF7IPQ6VMQ6 1270 aa25.45■■□□□ 1.66
USP53-203ENST00000507597 BICDL1Q6ZP65 573 aa25.45■■□□□ 1.66
USP53-203ENST00000507597 MYD88Q99836 296 aa25.45■■□□□ 1.66
USP53-203ENST00000507597 ATF5Q9Y2D1 282 aaPredicted RBP25.45■■□□□ 1.66
USP53-203ENST00000507597 CARMIL3Q8ND23 1372 aa25.44■■□□□ 1.66
USP53-203ENST00000507597 MMP10P09238 476 aa25.44■■□□□ 1.66
USP53-203ENST00000507597 NFIXQ14938 502 aa25.44■■□□□ 1.66
USP53-203ENST00000507597 SLC4A10Q6U841 1118 aa25.44■■□□□ 1.66
USP53-203ENST00000507597 TPTE2Q6XPS3 522 aa25.44■■□□□ 1.66
USP53-203ENST00000507597 ZNF34Q8IZ26 560 aa25.44■■□□□ 1.66
USP53-203ENST00000507597 CCDC191Q8NCU4 936 aa25.44■■□□□ 1.66
USP53-203ENST00000507597 SCN7AQ01118 1682 aa25.44■■□□□ 1.66
USP53-203ENST00000507597 HSP90B1P14625 803 aaKnown RBP25.43■■□□□ 1.66
USP53-203ENST00000507597 GTF2E1P29083 439 aaPredicted RBP25.43■■□□□ 1.66
USP53-203ENST00000507597 LINS1Q8NG48 757 aa25.43■■□□□ 1.66
USP53-203ENST00000507597 CASZ1Q86V15 1759 aa25.43■■□□□ 1.66
USP53-203ENST00000507597 ADCY9O60503 1353 aa25.43■■□□□ 1.66
USP53-203ENST00000507597 BCORQ6W2J9 1755 aa25.42■■□□□ 1.66
USP53-203ENST00000507597 CCT4P50991 539 aaKnown RBP25.42■■□□□ 1.66
USP53-203ENST00000507597 FTSJ3Q8IY81 847 aaKnown RBP25.42■■□□□ 1.66
USP53-203ENST00000507597 ISCA1Q9BUE6 129 aa25.42■■□□□ 1.66
USP53-203ENST00000507597 RNF123Q5XPI4 1314 aa25.41■■□□□ 1.66
USP53-203ENST00000507597 GPTP24298 496 aa25.41■■□□□ 1.66
USP53-203ENST00000507597 NBPF5PQ86XG9 351 aaPredicted RBP25.41■■□□□ 1.66
USP53-203ENST00000507597 SRCIN1Q9C0H9 1055 aa25.41■■□□□ 1.66
USP53-203ENST00000507597 CWC25Q9NXE8 425 aaPredicted RBP25.41■■□□□ 1.66
USP53-203ENST00000507597 F6X3S4 739 aa25.4■■□□□ 1.66
USP53-203ENST00000507597 ALDH1L1O75891 902 aa25.4■■□□□ 1.66
USP53-203ENST00000507597 SERPINB2P05120 415 aa25.4■■□□□ 1.66
USP53-203ENST00000507597 UTP14AQ9BVJ6 771 aaKnown RBP25.4■■□□□ 1.66
USP53-203ENST00000507597 ATP5J2-PTCD1G3V325 749 aa25.39■■□□□ 1.66
USP53-203ENST00000507597 ST5P78524 1137 aa25.39■■□□□ 1.66
USP53-203ENST00000507597 NLRP10Q86W26 655 aa25.39■■□□□ 1.66
USP53-203ENST00000507597 POLRMTO00411 1230 aaKnown RBP25.38■■□□□ 1.65
USP53-203ENST00000507597 DZIP1LQ8IYY4 767 aaKnown RBP25.38■■□□□ 1.65
USP53-203ENST00000507597 CNBD1Q8NA66 436 aa25.38■■□□□ 1.65
USP53-203ENST00000507597 HDAC5Q9UQL6 1122 aa25.38■■□□□ 1.65
USP53-203ENST00000507597 IBTKQ9P2D0 1353 aaPredicted RBP25.38■■□□□ 1.65
USP53-203ENST00000507597 NUP98P52948 1817 aa25.37■■□□□ 1.65
USP53-203ENST00000507597 PXDNLA1KZ92 1463 aa25.37■■□□□ 1.65
USP53-203ENST00000507597 TRIM27P14373 513 aa25.37■■□□□ 1.65
USP53-203ENST00000507597 BEND3Q5T5X7 828 aa25.37■■□□□ 1.65
USP53-203ENST00000507597 TRMT112Q9UI30 125 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms