RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 MADDQ8WXG6 1647 aa12.37□□□□□ -0.43
PFDN1-202ENST00000507185 PLEKHD1A6NEE1 506 aa12.36□□□□□ -0.43
PFDN1-202ENST00000507185 ARHGEF15O94989 841 aa12.36□□□□□ -0.43
PFDN1-202ENST00000507185 LBRQ14739 615 aaKnown RBP12.36□□□□□ -0.43
PFDN1-202ENST00000507185 EFHC2Q5JST6 749 aa12.36□□□□□ -0.43
PFDN1-202ENST00000507185 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
PFDN1-202ENST00000507185 ADAMTS19Q8TE59 1207 aa12.36□□□□□ -0.43
PFDN1-202ENST00000507185 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
PFDN1-202ENST00000507185 CFHR5Q9BXR6 569 aa12.36□□□□□ -0.43
PFDN1-202ENST00000507185 PHF24Q9UPV7 400 aa12.36□□□□□ -0.43
PFDN1-202ENST00000507185 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
PFDN1-202ENST00000507185 THBS1P07996 1170 aa12.35□□□□□ -0.43
PFDN1-202ENST00000507185 CELA2BP08218 269 aaPredicted RBP12.35□□□□□ -0.43
PFDN1-202ENST00000507185 ADAMTSL3P82987 1691 aa12.35□□□□□ -0.43
PFDN1-202ENST00000507185 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
PFDN1-202ENST00000507185 A6NJY4 79 aa12.34□□□□□ -0.43
PFDN1-202ENST00000507185 BACH1O14867 736 aa12.34□□□□□ -0.43
PFDN1-202ENST00000507185 CLUAP1Q96AJ1 413 aa12.34□□□□□ -0.43
PFDN1-202ENST00000507185 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
PFDN1-202ENST00000507185 POGZQ7Z3K3 1410 aa12.34□□□□□ -0.43
PFDN1-202ENST00000507185 DISP3Q9P2K9 1392 aa12.33□□□□□ -0.44
PFDN1-202ENST00000507185 CDK2AP1O14519 115 aa12.33□□□□□ -0.44
PFDN1-202ENST00000507185 MARSP56192 900 aaKnown RBP12.33□□□□□ -0.44
PFDN1-202ENST00000507185 KCNMA1Q12791 1236 aa12.33□□□□□ -0.44
PFDN1-202ENST00000507185 ENAMQ9NRM1 1142 aa12.33□□□□□ -0.44
PFDN1-202ENST00000507185 AKNAQ7Z591 1439 aa12.33□□□□□ -0.44
PFDN1-202ENST00000507185 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.44
PFDN1-202ENST00000507185 RNF225M0QZC1 329 aaPredicted RBP12.32□□□□□ -0.44
PFDN1-202ENST00000507185 MTFR1Q15390 333 aa12.32□□□□□ -0.44
PFDN1-202ENST00000507185 TRIM50Q86XT4 487 aa12.32□□□□□ -0.44
PFDN1-202ENST00000507185 FHOD3Q2V2M9 1422 aa12.31□□□□□ -0.44
PFDN1-202ENST00000507185 PROSER2Q86WR7 435 aaPredicted RBP12.31□□□□□ -0.44
PFDN1-202ENST00000507185 C1orf216Q8TAB5 229 aa12.31□□□□□ -0.44
PFDN1-202ENST00000507185 CRISPLD1Q9H336 500 aa12.31□□□□□ -0.44
PFDN1-202ENST00000507185 FANCAO15360 1455 aa12.31□□□□□ -0.44
PFDN1-202ENST00000507185 RIMS1Q86UR5 1692 aaKnown RBP12.31□□□□□ -0.44
PFDN1-202ENST00000507185 BCORL1Q5H9F3 1711 aa12.31□□□□□ -0.44
PFDN1-202ENST00000507185 FRMPD1Q5SYB0 1578 aa12.3□□□□□ -0.44
PFDN1-202ENST00000507185 NBPF1Q3BBV0 1214 aa12.3□□□□□ -0.44
PFDN1-202ENST00000507185 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.3□□□□□ -0.44
PFDN1-202ENST00000507185 CABP1Q9NZU7 370 aa12.3□□□□□ -0.44
PFDN1-202ENST00000507185 IQSEC3Q9UPP2 1182 aaPredicted RBP12.3□□□□□ -0.44
PFDN1-202ENST00000507185 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
PFDN1-202ENST00000507185 RAPGEF6Q8TEU7 1601 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 BCRP11274 1271 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 MAP2K3P46734 347 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 UBAP2LQ14157 1087 aaKnown RBP12.29□□□□□ -0.44
PFDN1-202ENST00000507185 USP17L2Q6R6M4 530 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 PLEKHM2Q8IWE5 1019 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 ACDQ96AP0 544 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 UCN2Q96RP3 112 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 ZNF358Q9NW07 568 aa12.29□□□□□ -0.44
PFDN1-202ENST00000507185 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
PFDN1-202ENST00000507185 NUP153P49790 1475 aaKnown RBP12.28□□□□□ -0.44
PFDN1-202ENST00000507185 ATP9BO43861 1147 aa12.28□□□□□ -0.44
PFDN1-202ENST00000507185 ATXN7L1Q9ULK2 861 aaPredicted RBP12.28□□□□□ -0.44
PFDN1-202ENST00000507185 ATP4AP20648 1035 aa12.27□□□□□ -0.45
PFDN1-202ENST00000507185 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.45
PFDN1-202ENST00000507185 ATP1A2P50993 1020 aa12.27□□□□□ -0.45
PFDN1-202ENST00000507185 ARSJQ5FYB0 599 aaPredicted RBP12.27□□□□□ -0.45
PFDN1-202ENST00000507185 FIGNL1Q6PIW4 674 aa12.27□□□□□ -0.45
PFDN1-202ENST00000507185 ZNF295-AS1Q8N0V1 137 aa12.27□□□□□ -0.45
PFDN1-202ENST00000507185 FNBP4Q8N3X1 1017 aaPredicted RBP12.27□□□□□ -0.45
PFDN1-202ENST00000507185 USP3Q9Y6I4 520 aa12.27□□□□□ -0.45
PFDN1-202ENST00000507185 ZFYVE16Q7Z3T8 1539 aa12.27□□□□□ -0.45
PFDN1-202ENST00000507185 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
PFDN1-202ENST00000507185 SCARF2Q96GP6 870 aaPredicted RBP12.26□□□□□ -0.45
PFDN1-202ENST00000507185 ABHD17AQ96GS6 310 aa12.26□□□□□ -0.45
PFDN1-202ENST00000507185 SCHIP1Q9P0W5 487 aaPredicted RBP12.26□□□□□ -0.45
PFDN1-202ENST00000507185 RASSF7Q02833 373 aa12.25□□□□□ -0.45
PFDN1-202ENST00000507185 ILDR2Q71H61 639 aa12.25□□□□□ -0.45
PFDN1-202ENST00000507185 NLRP8Q86W28 1048 aa12.25□□□□□ -0.45
PFDN1-202ENST00000507185 NEDD1Q8NHV4 660 aa12.25□□□□□ -0.45
PFDN1-202ENST00000507185 TPCN2Q8NHX9 752 aa12.25□□□□□ -0.45
PFDN1-202ENST00000507185 GLMNQ92990 594 aa12.25□□□□□ -0.45
PFDN1-202ENST00000507185 OXCT2Q9BYC2 517 aaPredicted RBP12.25□□□□□ -0.45
PFDN1-202ENST00000507185 BNIP3LO60238 219 aa12.24□□□□□ -0.45
PFDN1-202ENST00000507185 GSK3AP49840 483 aa12.24□□□□□ -0.45
PFDN1-202ENST00000507185 TMEM151AQ8N4L1 468 aa12.24□□□□□ -0.45
PFDN1-202ENST00000507185 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
PFDN1-202ENST00000507185 ZCCHC2Q9C0B9 1178 aaKnown RBP12.24□□□□□ -0.45
PFDN1-202ENST00000507185 ZDHHC3Q9NYG2 299 aa12.24□□□□□ -0.45
PFDN1-202ENST00000507185 MKRN1Q9UHC7 482 aaKnown RBP12.24□□□□□ -0.45
PFDN1-202ENST00000507185 PARP3Q9Y6F1 533 aa12.24□□□□□ -0.45
PFDN1-202ENST00000507185 A0A1W2PNR3 127 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 GDF11O95390 407 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 BMP4P12644 408 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 FGFR3P22607 806 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 IRS1P35568 1242 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 CLDN10P78369 228 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 CCDC102BQ68D86 513 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 KLRG1Q96E93 195 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 NDFIP2Q9NV92 336 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 DNAAF2Q9NVR5 837 aaKnown RBP12.23□□□□□ -0.45
PFDN1-202ENST00000507185 PCDHGC4Q9Y5F7 938 aa12.23□□□□□ -0.45
PFDN1-202ENST00000507185 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms