RNA–Protein interactions for RNA: ENST00000506832.6

GPATCH4-211, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-211ENST00000506832 TSPYL4Q9UJ04 414 aa16.91■□□□□ 0.3
GPATCH4-211ENST00000506832 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
GPATCH4-211ENST00000506832 ZNF652Q9Y2D9 606 aa16.91■□□□□ 0.3
GPATCH4-211ENST00000506832 C21orf2O43822 256 aa16.9■□□□□ 0.3
GPATCH4-211ENST00000506832 PDE6BP35913 854 aa16.9■□□□□ 0.3
GPATCH4-211ENST00000506832 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
GPATCH4-211ENST00000506832 HLFQ16534 295 aa16.9■□□□□ 0.3
GPATCH4-211ENST00000506832 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
GPATCH4-211ENST00000506832 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
GPATCH4-211ENST00000506832 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
GPATCH4-211ENST00000506832 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
GPATCH4-211ENST00000506832 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
GPATCH4-211ENST00000506832 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
GPATCH4-211ENST00000506832 TIAM2Q8IVF5 1701 aa16.89■□□□□ 0.29
GPATCH4-211ENST00000506832 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
GPATCH4-211ENST00000506832 PRELPP51888 382 aa16.88■□□□□ 0.29
GPATCH4-211ENST00000506832 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
GPATCH4-211ENST00000506832 NFKBIEO00221 500 aa16.87■□□□□ 0.29
GPATCH4-211ENST00000506832 GPTP24298 496 aa16.87■□□□□ 0.29
GPATCH4-211ENST00000506832 GTF2E1P29083 439 aaPredicted RBP16.87■□□□□ 0.29
GPATCH4-211ENST00000506832 TTLL7Q6ZT98 887 aa16.87■□□□□ 0.29
GPATCH4-211ENST00000506832 SBF1O95248 1867 aa16.86■□□□□ 0.29
GPATCH4-211ENST00000506832 ANXA1P04083 346 aa16.86■□□□□ 0.29
GPATCH4-211ENST00000506832 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
GPATCH4-211ENST00000506832 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
GPATCH4-211ENST00000506832 RRAGCQ9HB90 399 aa16.86■□□□□ 0.29
GPATCH4-211ENST00000506832 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
GPATCH4-211ENST00000506832 HSPA6P17066 643 aa16.85■□□□□ 0.29
GPATCH4-211ENST00000506832 LMNB1P20700 586 aa16.85■□□□□ 0.29
GPATCH4-211ENST00000506832 PRPF40BQ6NWY9 871 aaKnown RBP16.85■□□□□ 0.29
GPATCH4-211ENST00000506832 NUTM1Q86Y26 1132 aa16.85■□□□□ 0.29
GPATCH4-211ENST00000506832 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
GPATCH4-211ENST00000506832 KRT24Q2M2I5 525 aa16.84■□□□□ 0.29
GPATCH4-211ENST00000506832 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
GPATCH4-211ENST00000506832 ABCC12Q96J65 1359 aa16.84■□□□□ 0.29
GPATCH4-211ENST00000506832 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
GPATCH4-211ENST00000506832 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
GPATCH4-211ENST00000506832 SRGNP10124 158 aa16.83■□□□□ 0.28
GPATCH4-211ENST00000506832 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
GPATCH4-211ENST00000506832 OLFM4Q6UX06 510 aa16.83■□□□□ 0.28
GPATCH4-211ENST00000506832 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
GPATCH4-211ENST00000506832 MAP3K15Q6ZN16 1313 aa16.83■□□□□ 0.28
GPATCH4-211ENST00000506832 MASTLQ96GX5 879 aa16.83■□□□□ 0.28
GPATCH4-211ENST00000506832 PROSER3Q2NL68 480 aa16.82■□□□□ 0.28
GPATCH4-211ENST00000506832 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
GPATCH4-211ENST00000506832 CNKSR1Q969H4 720 aa16.82■□□□□ 0.28
GPATCH4-211ENST00000506832 TOMM70O94826 608 aa16.81■□□□□ 0.28
GPATCH4-211ENST00000506832 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
GPATCH4-211ENST00000506832 STYK1Q6J9G0 422 aa16.81■□□□□ 0.28
GPATCH4-211ENST00000506832 RUNDC1Q96C34 613 aa16.81■□□□□ 0.28
GPATCH4-211ENST00000506832 TAOK3Q9H2K8 898 aa16.81■□□□□ 0.28
GPATCH4-211ENST00000506832 PRKRIP1Q9H875 184 aaPredicted RBP16.81■□□□□ 0.28
GPATCH4-211ENST00000506832 ADAMTS8Q9UP79 889 aa16.81■□□□□ 0.28
GPATCH4-211ENST00000506832 NUP98P52948 1817 aa16.8■□□□□ 0.28
GPATCH4-211ENST00000506832 UBN2Q6ZU65 1347 aa16.8■□□□□ 0.28
GPATCH4-211ENST00000506832 ERFEQ4G0M1 354 aa16.8■□□□□ 0.28
GPATCH4-211ENST00000506832 PDZRN3Q9UPQ7 1066 aa16.8■□□□□ 0.28
GPATCH4-211ENST00000506832 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
GPATCH4-211ENST00000506832 NPR1P16066 1061 aa16.79■□□□□ 0.28
GPATCH4-211ENST00000506832 HTRA3P83110 453 aa16.79■□□□□ 0.28
GPATCH4-211ENST00000506832 ARFGEF2Q9Y6D5 1785 aa16.79■□□□□ 0.28
GPATCH4-211ENST00000506832 FER1L6Q2WGJ9 1857 aa16.78■□□□□ 0.28
GPATCH4-211ENST00000506832 SLC51AQ86UW1 340 aa16.78■□□□□ 0.28
GPATCH4-211ENST00000506832 GLTPD2A6NH11 291 aa16.77■□□□□ 0.28
GPATCH4-211ENST00000506832 CCDC93Q567U6 631 aa16.77■□□□□ 0.28
GPATCH4-211ENST00000506832 SUSD4Q5VX71 490 aa16.77■□□□□ 0.28
GPATCH4-211ENST00000506832 NYXQ9GZU5 481 aa16.77■□□□□ 0.28
GPATCH4-211ENST00000506832 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.28
GPATCH4-211ENST00000506832 ERVV-1B6SEH8 477 aa16.76■□□□□ 0.27
GPATCH4-211ENST00000506832 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
GPATCH4-211ENST00000506832 RPGRQ92834 1020 aaKnown RBP16.76■□□□□ 0.27
GPATCH4-211ENST00000506832 ZNF277Q9NRM2 450 aaPredicted RBP16.76■□□□□ 0.27
GPATCH4-211ENST00000506832 PDIA6Q15084 440 aa16.75■□□□□ 0.27
GPATCH4-211ENST00000506832 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
GPATCH4-211ENST00000506832 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
GPATCH4-211ENST00000506832 ERBB4Q15303 1308 aa16.74■□□□□ 0.27
GPATCH4-211ENST00000506832 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
GPATCH4-211ENST00000506832 APAF1O14727 1248 aa16.74■□□□□ 0.27
GPATCH4-211ENST00000506832 SOGA3Q5TF21 947 aa16.74■□□□□ 0.27
GPATCH4-211ENST00000506832 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
GPATCH4-211ENST00000506832 C3orf67Q6ZVT6 689 aa16.74■□□□□ 0.27
GPATCH4-211ENST00000506832 COPS6Q7L5N1 327 aa16.74■□□□□ 0.27
GPATCH4-211ENST00000506832 DDNO94850 711 aaPredicted RBP16.73■□□□□ 0.27
GPATCH4-211ENST00000506832 NTSR2O95665 410 aa16.73■□□□□ 0.27
GPATCH4-211ENST00000506832 APLP1P51693 650 aa16.73■□□□□ 0.27
GPATCH4-211ENST00000506832 HDGFL1Q5TGJ6 251 aa16.73■□□□□ 0.27
GPATCH4-211ENST00000506832 DPY19L2Q6NUT2 758 aa16.73■□□□□ 0.27
GPATCH4-211ENST00000506832 WDR90Q96KV7 1748 aa16.73■□□□□ 0.27
GPATCH4-211ENST00000506832 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
GPATCH4-211ENST00000506832 CCDC184Q52MB2 194 aa16.72■□□□□ 0.27
GPATCH4-211ENST00000506832 LRP10Q7Z4F1 713 aa16.72■□□□□ 0.27
GPATCH4-211ENST00000506832 ZNF34Q8IZ26 560 aa16.72■□□□□ 0.27
GPATCH4-211ENST00000506832 DICER1Q9UPY3 1922 aaKnown RBP16.72■□□□□ 0.27
GPATCH4-211ENST00000506832 ZNF541Q9H0D2 1346 aa16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 LTBP3Q9NS15 1303 aa16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 CHL1O00533 1208 aa16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 RGL2O15211 777 aa16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 FKBP4Q02790 459 aaKnown RBP eCLIP16.71■□□□□ 0.27
GPATCH4-211ENST00000506832 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms