RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 AIDAQ96BJ3 306 aa6.5□□□□□ -1.37
TOPBP1-205ENST00000506779 MEGF10Q96KG7 1140 aa6.5□□□□□ -1.37
TOPBP1-205ENST00000506779 SPOCD1Q6ZMY3 1216 aa6.49□□□□□ -1.37
TOPBP1-205ENST00000506779 FMR1NBQ8N0W7 255 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-205ENST00000506779 TGFB1P01137 390 aa6.47□□□□□ -1.37
TOPBP1-205ENST00000506779 SPINK2P20155 84 aa6.47□□□□□ -1.37
TOPBP1-205ENST00000506779 ESCO1Q5FWF5 840 aa6.47□□□□□ -1.37
TOPBP1-205ENST00000506779 SAMD5Q5TGI4 173 aa6.47□□□□□ -1.37
TOPBP1-205ENST00000506779 SH3D19Q5HYK7 790 aa6.46□□□□□ -1.38
TOPBP1-205ENST00000506779 DDRGK1Q96HY6 314 aa6.46□□□□□ -1.38
TOPBP1-205ENST00000506779 KDM4CQ9H3R0 1056 aa6.46□□□□□ -1.38
TOPBP1-205ENST00000506779 GPBP1L1Q9HC44 474 aaPredicted RBP6.46□□□□□ -1.38
TOPBP1-205ENST00000506779 GJA3Q9Y6H8 435 aa6.46□□□□□ -1.38
TOPBP1-205ENST00000506779 TLR1Q15399 786 aa6.45□□□□□ -1.38
TOPBP1-205ENST00000506779 SKIV2LQ15477 1246 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-205ENST00000506779 ILDR2Q71H61 639 aa6.44□□□□□ -1.38
TOPBP1-205ENST00000506779 HMX1Q9NP08 348 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-205ENST00000506779 AP1G2O75843 785 aa6.43□□□□□ -1.38
TOPBP1-205ENST00000506779 WNT11O96014 354 aa6.43□□□□□ -1.38
TOPBP1-205ENST00000506779 DMRTC2Q8IXT2 367 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-205ENST00000506779 BCANQ96GW7 911 aa6.43□□□□□ -1.38
TOPBP1-205ENST00000506779 SLC30A3Q99726 388 aa6.43□□□□□ -1.38
TOPBP1-205ENST00000506779 NIFKQ9BYG3 293 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-205ENST00000506779 FAM117AQ9C073 453 aa6.43□□□□□ -1.38
TOPBP1-205ENST00000506779 ZBBXA8MT70 800 aa6.42□□□□□ -1.38
TOPBP1-205ENST00000506779 PTCD1O75127 700 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-205ENST00000506779 MYCP01106 439 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-205ENST00000506779 FBXO31Q5XUX0 539 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-205ENST00000506779 PROCA1Q8NCQ7 364 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-205ENST00000506779 TATP17735 454 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-205ENST00000506779 NBPF1Q3BBV0 1214 aa6.41□□□□□ -1.38
TOPBP1-205ENST00000506779 INTS5Q6P9B9 1019 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-205ENST00000506779 DTX1Q86Y01 620 aa6.41□□□□□ -1.38
TOPBP1-205ENST00000506779 DZIP1LQ8IYY4 767 aaKnown RBP6.41□□□□□ -1.38
TOPBP1-205ENST00000506779 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.41□□□□□ -1.38
TOPBP1-205ENST00000506779 JPH1Q9HDC5 661 aaPredicted RBP6.41□□□□□ -1.38
TOPBP1-205ENST00000506779 GSC2O15499 205 aa6.4□□□□□ -1.38
TOPBP1-205ENST00000506779 STAU1O95793 577 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-205ENST00000506779 IGLV1-40P01703 118 aa6.4□□□□□ -1.38
TOPBP1-205ENST00000506779 ETNK1Q9HBU6 452 aa6.4□□□□□ -1.38
TOPBP1-205ENST00000506779 FBXO45P0C2W1 286 aa6.39□□□□□ -1.39
TOPBP1-205ENST00000506779 USP17L8P0C7I0 530 aa6.39□□□□□ -1.39
TOPBP1-205ENST00000506779 GRIK1P39086 918 aa6.39□□□□□ -1.39
TOPBP1-205ENST00000506779 AFF1P51825 1210 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-205ENST00000506779 FBXO11Q86XK2 927 aa6.39□□□□□ -1.39
TOPBP1-205ENST00000506779 ASIC4Q96FT7 647 aa6.39□□□□□ -1.39
TOPBP1-205ENST00000506779 SFSWAPQ12872 951 aaKnown RBP6.38□□□□□ -1.39
TOPBP1-205ENST00000506779 NUDT8Q8WV74 236 aa6.38□□□□□ -1.39
TOPBP1-205ENST00000506779 CDCA7Q9BWT1 371 aaPredicted RBP6.38□□□□□ -1.39
TOPBP1-205ENST00000506779 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
TOPBP1-205ENST00000506779 ZDHHC3Q9NYG2 299 aa6.38□□□□□ -1.39
TOPBP1-205ENST00000506779 DBX1A6NMT0 343 aa6.37□□□□□ -1.39
TOPBP1-205ENST00000506779 MCCD1P59942 119 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-205ENST00000506779 NEUROD1Q13562 356 aa6.37□□□□□ -1.39
TOPBP1-205ENST00000506779 IGF2-ASQ6U949 168 aa6.37□□□□□ -1.39
TOPBP1-205ENST00000506779 ZDHHC13Q8IUH4 622 aa6.37□□□□□ -1.39
TOPBP1-205ENST00000506779 ABI1Q8IZP0 508 aa6.37□□□□□ -1.39
TOPBP1-205ENST00000506779 DTWD1Q8N5C7 304 aa6.37□□□□□ -1.39
TOPBP1-205ENST00000506779 SPEM2Q0P670 501 aa6.36□□□□□ -1.39
TOPBP1-205ENST00000506779 RAB44Q7Z6P3 723 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-205ENST00000506779 ZNF865P0CJ78 1059 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-205ENST00000506779 RFC5P40937 340 aa6.35□□□□□ -1.39
TOPBP1-205ENST00000506779 BICDL1Q6ZP65 573 aa6.35□□□□□ -1.39
TOPBP1-205ENST00000506779 ZNF295-AS1Q8N0V1 137 aa6.35□□□□□ -1.39
TOPBP1-205ENST00000506779 PCMTD1Q96MG8 357 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-205ENST00000506779 RAXQ9Y2V3 346 aa6.35□□□□□ -1.39
TOPBP1-205ENST00000506779 NCANO14594 1321 aa6.33□□□□□ -1.4
TOPBP1-205ENST00000506779 PRRG2O14669 202 aa6.33□□□□□ -1.4
TOPBP1-205ENST00000506779 ZNF124Q15973 351 aa6.33□□□□□ -1.4
TOPBP1-205ENST00000506779 AKTIPQ9H8T0 292 aa6.33□□□□□ -1.4
TOPBP1-205ENST00000506779 ZNF648Q5T619 568 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-205ENST00000506779 CCDC85AQ96PX6 553 aaPredicted RBP6.32□□□□□ -1.4
TOPBP1-205ENST00000506779 TRIM34Q9BYJ4 488 aa6.32□□□□□ -1.4
TOPBP1-205ENST00000506779 SLC6A14Q9UN76 642 aa6.32□□□□□ -1.4
TOPBP1-205ENST00000506779 ALX3O95076 343 aa6.31□□□□□ -1.4
TOPBP1-205ENST00000506779 NEUROD2Q15784 382 aa6.31□□□□□ -1.4
TOPBP1-205ENST00000506779 MSL1Q68DK7 614 aa6.31□□□□□ -1.4
TOPBP1-205ENST00000506779 PSAPL1Q6NUJ1 521 aa6.31□□□□□ -1.4
TOPBP1-205ENST00000506779 LRRC69Q6ZNQ3 347 aa6.31□□□□□ -1.4
TOPBP1-205ENST00000506779 STOML1Q9UBI4 398 aa6.31□□□□□ -1.4
TOPBP1-205ENST00000506779 PRR19A6NJB7 356 aa6.3□□□□□ -1.4
TOPBP1-205ENST00000506779 TBC1D8BQ0IIM8 1120 aa6.3□□□□□ -1.4
TOPBP1-205ENST00000506779 TMEM259Q4ZIN3 620 aa6.3□□□□□ -1.4
TOPBP1-205ENST00000506779 CBLL1Q75N03 491 aa6.3□□□□□ -1.4
TOPBP1-205ENST00000506779 ZNF592Q92610 1267 aa6.3□□□□□ -1.4
TOPBP1-205ENST00000506779 SOCS7O14512 581 aa6.29□□□□□ -1.4
TOPBP1-205ENST00000506779 RGS9O75916 674 aaPredicted RBP6.29□□□□□ -1.4
TOPBP1-205ENST00000506779 ITGB5P18084 799 aa6.29□□□□□ -1.4
TOPBP1-205ENST00000506779 SMTNP53814 917 aa6.29□□□□□ -1.4
TOPBP1-205ENST00000506779 UBE2OQ9C0C9 1292 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-205ENST00000506779 GOPCQ9HD26 462 aa6.29□□□□□ -1.4
TOPBP1-205ENST00000506779 INHAP05111 366 aa6.28□□□□□ -1.4
TOPBP1-205ENST00000506779 SCNN1DP51172 638 aa6.28□□□□□ -1.4
TOPBP1-205ENST00000506779 IQSEC3Q9UPP2 1182 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-205ENST00000506779 JUNBP17275 347 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-205ENST00000506779 NFIAQ12857 509 aa6.27□□□□□ -1.41
TOPBP1-205ENST00000506779 TMEM130Q8N3G9 435 aa6.27□□□□□ -1.41
TOPBP1-205ENST00000506779 IL27Q8NEV9 243 aa6.27□□□□□ -1.41
TOPBP1-205ENST00000506779 IGFLR1Q9H665 355 aa6.27□□□□□ -1.41
TOPBP1-205ENST00000506779 NAGPAQ9UK23 515 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms