RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RGL2O15211 777 aa18.96■□□□□ 0.63
CDC42SE2-209ENST00000506419 C21orf2O43822 256 aa18.96■□□□□ 0.63
CDC42SE2-209ENST00000506419 NBPF5PQ86XG9 351 aaPredicted RBP18.96■□□□□ 0.63
CDC42SE2-209ENST00000506419 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
CDC42SE2-209ENST00000506419 TSPYL4Q9UJ04 414 aa18.96■□□□□ 0.63
CDC42SE2-209ENST00000506419 ZNF652Q9Y2D9 606 aa18.96■□□□□ 0.63
CDC42SE2-209ENST00000506419 FAM177BA6PVY3 158 aa18.95■□□□□ 0.62
CDC42SE2-209ENST00000506419 MYL6BP14649 208 aa18.95■□□□□ 0.62
CDC42SE2-209ENST00000506419 ST5P78524 1137 aa18.95■□□□□ 0.62
CDC42SE2-209ENST00000506419 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
CDC42SE2-209ENST00000506419 TRIM35Q9UPQ4 493 aa18.95■□□□□ 0.62
CDC42SE2-209ENST00000506419 DLG5Q8TDM6 1919 aa18.94■□□□□ 0.62
CDC42SE2-209ENST00000506419 KLRG2A4D1S0 409 aaPredicted RBP18.94■□□□□ 0.62
CDC42SE2-209ENST00000506419 NPHP1O15259 732 aa18.94■□□□□ 0.62
CDC42SE2-209ENST00000506419 LMNB1P20700 586 aa18.94■□□□□ 0.62
CDC42SE2-209ENST00000506419 PDIA6Q15084 440 aa18.94■□□□□ 0.62
CDC42SE2-209ENST00000506419 STYK1Q6J9G0 422 aa18.94■□□□□ 0.62
CDC42SE2-209ENST00000506419 TPTE2Q6XPS3 522 aa18.94■□□□□ 0.62
CDC42SE2-209ENST00000506419 SCN7AQ01118 1682 aa18.94■□□□□ 0.62
CDC42SE2-209ENST00000506419 ERVV-1B6SEH8 477 aa18.93■□□□□ 0.62
CDC42SE2-209ENST00000506419 LRP10Q7Z4F1 713 aa18.93■□□□□ 0.62
CDC42SE2-209ENST00000506419 RUNDC1Q96C34 613 aa18.93■□□□□ 0.62
CDC42SE2-209ENST00000506419 MASTLQ96GX5 879 aa18.93■□□□□ 0.62
CDC42SE2-209ENST00000506419 RRAGCQ9HB90 399 aa18.93■□□□□ 0.62
CDC42SE2-209ENST00000506419 BABAM1Q9NWV8 329 aa18.93■□□□□ 0.62
CDC42SE2-209ENST00000506419 TOMM70O94826 608 aa18.92■□□□□ 0.62
CDC42SE2-209ENST00000506419 HSPA6P17066 643 aa18.92■□□□□ 0.62
CDC42SE2-209ENST00000506419 EIF2S2P20042 333 aaKnown RBP18.92■□□□□ 0.62
CDC42SE2-209ENST00000506419 C7orf43Q8WVR3 580 aa18.92■□□□□ 0.62
CDC42SE2-209ENST00000506419 CNKSR1Q969H4 720 aa18.92■□□□□ 0.62
CDC42SE2-209ENST00000506419 MAP3K15Q6ZN16 1313 aa18.92■□□□□ 0.62
CDC42SE2-209ENST00000506419 ANKRD31Q8N7Z5 1873 aa18.92■□□□□ 0.62
CDC42SE2-209ENST00000506419 CHL1O00533 1208 aa18.91■□□□□ 0.62
CDC42SE2-209ENST00000506419 ANXA1P04083 346 aa18.9■□□□□ 0.62
CDC42SE2-209ENST00000506419 LMOD3Q0VAK6 560 aa18.9■□□□□ 0.62
CDC42SE2-209ENST00000506419 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
CDC42SE2-209ENST00000506419 KRT24Q2M2I5 525 aa18.9■□□□□ 0.62
CDC42SE2-209ENST00000506419 PROSER3Q2NL68 480 aa18.9■□□□□ 0.62
CDC42SE2-209ENST00000506419 PRPF40BQ6NWY9 871 aaKnown RBP18.9■□□□□ 0.62
CDC42SE2-209ENST00000506419 ZBTB3Q9H5J0 574 aa18.9■□□□□ 0.62
CDC42SE2-209ENST00000506419 KDM3BQ7LBC6 1761 aa18.89■□□□□ 0.61
CDC42SE2-209ENST00000506419 NUTM1Q86Y26 1132 aa18.89■□□□□ 0.61
CDC42SE2-209ENST00000506419 KDM2BQ8NHM5 1336 aa18.89■□□□□ 0.61
CDC42SE2-209ENST00000506419 GLTPD2A6NH11 291 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 NPR1P16066 1061 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 GPTP24298 496 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 SUSD4Q5VX71 490 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 KIF6Q6ZMV9 814 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 ZNF34Q8IZ26 560 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 ERBB4Q15303 1308 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 BCORQ6W2J9 1755 aa18.88■□□□□ 0.61
CDC42SE2-209ENST00000506419 SBF1O95248 1867 aa18.87■□□□□ 0.61
CDC42SE2-209ENST00000506419 GTF2E1P29083 439 aaPredicted RBP18.87■□□□□ 0.61
CDC42SE2-209ENST00000506419 ERFEQ4G0M1 354 aa18.87■□□□□ 0.61
CDC42SE2-209ENST00000506419 OLFM4Q6UX06 510 aa18.87■□□□□ 0.61
CDC42SE2-209ENST00000506419 GIGYF2Q6Y7W6 1299 aaKnown RBP18.87■□□□□ 0.61
CDC42SE2-209ENST00000506419 UBN2Q6ZU65 1347 aa18.87■□□□□ 0.61
CDC42SE2-209ENST00000506419 DLEC1Q9Y238 1755 aa18.87■□□□□ 0.61
CDC42SE2-209ENST00000506419 LAS1LQ9Y4W2 734 aaKnown RBP18.87■□□□□ 0.61
CDC42SE2-209ENST00000506419 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
CDC42SE2-209ENST00000506419 POTECB2RU33 542 aa18.86■□□□□ 0.61
CDC42SE2-209ENST00000506419 RBM46Q8TBY0 533 aaKnown RBP18.86■□□□□ 0.61
CDC42SE2-209ENST00000506419 COL11A2P13942 1736 aaPredicted RBP18.85■□□□□ 0.61
CDC42SE2-209ENST00000506419 SLX4Q8IY92 1834 aa18.84■□□□□ 0.61
CDC42SE2-209ENST00000506419 LTBP3Q9NS15 1303 aa18.84■□□□□ 0.61
CDC42SE2-209ENST00000506419 CCDC184Q52MB2 194 aa18.84■□□□□ 0.61
CDC42SE2-209ENST00000506419 COPS6Q7L5N1 327 aa18.84■□□□□ 0.61
CDC42SE2-209ENST00000506419 NYXQ9GZU5 481 aa18.84■□□□□ 0.61
CDC42SE2-209ENST00000506419 TAOK3Q9H2K8 898 aa18.84■□□□□ 0.61
CDC42SE2-209ENST00000506419 ABCC12Q96J65 1359 aa18.83■□□□□ 0.61
CDC42SE2-209ENST00000506419 APAF1O14727 1248 aa18.83■□□□□ 0.6
CDC42SE2-209ENST00000506419 CRY2Q49AN0 593 aa18.83■□□□□ 0.6
CDC42SE2-209ENST00000506419 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
CDC42SE2-209ENST00000506419 NTSR2O95665 410 aa18.82■□□□□ 0.6
CDC42SE2-209ENST00000506419 ALDH1B1P30837 517 aa18.82■□□□□ 0.6
CDC42SE2-209ENST00000506419 AIMP1Q12904 312 aaKnown RBP18.82■□□□□ 0.6
CDC42SE2-209ENST00000506419 SOGA3Q5TF21 947 aa18.82■□□□□ 0.6
CDC42SE2-209ENST00000506419 C16orf71Q8IYS4 520 aaPredicted RBP18.82■□□□□ 0.6
CDC42SE2-209ENST00000506419 XAGE3Q8WTP9 111 aa18.82■□□□□ 0.6
CDC42SE2-209ENST00000506419 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
CDC42SE2-209ENST00000506419 VEGFAP15692 232 aaPredicted RBP18.81■□□□□ 0.6
CDC42SE2-209ENST00000506419 CCDC93Q567U6 631 aa18.81■□□□□ 0.6
CDC42SE2-209ENST00000506419 DNAJC5GQ8N7S2 189 aa18.81■□□□□ 0.6
CDC42SE2-209ENST00000506419 CFAP44Q96MT7 982 aa18.81■□□□□ 0.6
CDC42SE2-209ENST00000506419 DDX21Q9NR30 783 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDC42SE2-209ENST00000506419 LAMB4A4D0S4 1761 aa18.81■□□□□ 0.6
CDC42SE2-209ENST00000506419 HOXA10P31260 410 aaPredicted RBP18.8■□□□□ 0.6
CDC42SE2-209ENST00000506419 APLP1P51693 650 aa18.8■□□□□ 0.6
CDC42SE2-209ENST00000506419 SLC10A5Q5PT55 438 aa18.8■□□□□ 0.6
CDC42SE2-209ENST00000506419 DPY19L2Q6NUT2 758 aa18.8■□□□□ 0.6
CDC42SE2-209ENST00000506419 DDNO94850 711 aaPredicted RBP18.79■□□□□ 0.6
CDC42SE2-209ENST00000506419 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDC42SE2-209ENST00000506419 FSTL1Q12841 308 aa18.79■□□□□ 0.6
CDC42SE2-209ENST00000506419 PARP10Q53GL7 1025 aa18.79■□□□□ 0.6
CDC42SE2-209ENST00000506419 SLC51AQ86UW1 340 aa18.79■□□□□ 0.6
CDC42SE2-209ENST00000506419 ZNF277Q9NRM2 450 aaPredicted RBP18.79■□□□□ 0.6
CDC42SE2-209ENST00000506419 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
CDC42SE2-209ENST00000506419 HTRA3P83110 453 aa18.78■□□□□ 0.6
CDC42SE2-209ENST00000506419 PPP1R42Q7Z4L9 355 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms