RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 JCADQ9P266 1359 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 CCDC163A0A0D9SF12 145 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 TMEM88BA6NKF7 163 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 MPHOSPH10O00566 681 aaKnown RBP10.69□□□□□ -0.7
HTT-203ENST00000506137 NBPF7P0C2Y1 421 aaPredicted RBP10.69□□□□□ -0.7
HTT-203ENST00000506137 SETSIPP0DME0 302 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 RPL17P18621 184 aaKnown RBP10.69□□□□□ -0.7
HTT-203ENST00000506137 ZNF746Q6NUN9 644 aaPredicted RBP10.69□□□□□ -0.7
HTT-203ENST00000506137 MIER1Q8N108 512 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 C22orf23Q9BZE7 217 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 ZSWIM4Q9H7M6 989 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 UTP6Q9NYH9 597 aaKnown RBP10.69□□□□□ -0.7
HTT-203ENST00000506137 ZNF69Q9UC07 566 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
HTT-203ENST00000506137 THRAP3Q9Y2W1 955 aaKnown RBP10.69□□□□□ -0.7
HTT-203ENST00000506137 CARNS1A5YM72 827 aa10.68□□□□□ -0.7
HTT-203ENST00000506137 LETM1O95202 739 aaPredicted RBP10.68□□□□□ -0.7
HTT-203ENST00000506137 TRPC1P48995 793 aa10.68□□□□□ -0.7
HTT-203ENST00000506137 FAM161AQ3B820 660 aa10.68□□□□□ -0.7
HTT-203ENST00000506137 C1QTNF12Q5T7M4 302 aa10.68□□□□□ -0.7
HTT-203ENST00000506137 NDUFAF2Q8N183 169 aa10.68□□□□□ -0.7
HTT-203ENST00000506137 MNS1Q8NEH6 495 aa10.68□□□□□ -0.7
HTT-203ENST00000506137 DHX38Q92620 1227 aaKnown RBP10.68□□□□□ -0.7
HTT-203ENST00000506137 IWS1Q96ST2 819 aa10.68□□□□□ -0.7
HTT-203ENST00000506137 CFAP65Q6ZU64 1925 aaKnown RBP10.67□□□□□ -0.7
HTT-203ENST00000506137 GTF2F1P35269 517 aaKnown RBP eCLIP10.67□□□□□ -0.7
HTT-203ENST00000506137 CHRDL2Q6WN34 429 aa10.67□□□□□ -0.7
HTT-203ENST00000506137 NFXL1Q6ZNB6 911 aa10.67□□□□□ -0.7
HTT-203ENST00000506137 CHPFQ8IZ52 775 aa10.67□□□□□ -0.7
HTT-203ENST00000506137 RPUSD2Q8IZ73 545 aaKnown RBP10.67□□□□□ -0.7
HTT-203ENST00000506137 TEX19Q8NA77 164 aa10.67□□□□□ -0.7
HTT-203ENST00000506137 LRRC27Q9C0I9 530 aa10.67□□□□□ -0.7
HTT-203ENST00000506137 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
HTT-203ENST00000506137 SUN2Q9UH99 717 aa10.67□□□□□ -0.7
HTT-203ENST00000506137 ASAP1Q9ULH1 1129 aa10.67□□□□□ -0.7
HTT-203ENST00000506137 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 CEP170BQ9Y4F5 1589 aaPredicted RBP10.66□□□□□ -0.7
HTT-203ENST00000506137 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 SCAMP3O14828 347 aaKnown RBP10.66□□□□□ -0.7
HTT-203ENST00000506137 CCDC175P0C221 793 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 FAM163BP0C2L3 166 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 RFX1P22670 979 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 WASHC5Q12768 1159 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 TSNAXIP1Q2TAA8 658 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 ALDH1L2Q3SY69 923 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
HTT-203ENST00000506137 CDHR1Q96JP9 859 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 POLG2Q9UHN1 485 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 LRP6O75581 1613 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 MYO3AQ8NEV4 1616 aa10.66□□□□□ -0.7
HTT-203ENST00000506137 ABCA8O94911 1581 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 DISP1Q96F81 1524 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 TMEM238LA0A1B0GVL6 79 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 CAND2O75155 1236 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 NAT1P18440 290 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 FAM160A1Q05DH4 1040 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 BMS1Q14692 1282 aaKnown RBP10.65□□□□□ -0.7
HTT-203ENST00000506137 MAP9Q49MG5 647 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 ZC3H12AQ5D1E8 599 aaKnown RBP10.65□□□□□ -0.7
HTT-203ENST00000506137 CTR9Q6PD62 1173 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.7
HTT-203ENST00000506137 APBA2Q99767 749 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 GTPBP4Q9BZE4 634 aaKnown RBP10.65□□□□□ -0.7
HTT-203ENST00000506137 PIF1Q9H611 641 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 EFCC1Q9HA90 598 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 PRM3Q9NNZ6 103 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 PRKAB1Q9Y478 270 aa10.65□□□□□ -0.7
HTT-203ENST00000506137 CFAP74Q9C0B2 1584 aa10.65□□□□□ -0.71
HTT-203ENST00000506137 ROBO1Q9Y6N7 1651 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 PDGFRBP09619 1106 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 ZNF853P0CG23 659 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 MS4A1P11836 297 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 USP5P45974 858 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 TRAPPC10P48553 1259 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 RBL2Q08999 1139 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 BRD3Q15059 726 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 ENOX2Q16206 610 aaKnown RBP10.64□□□□□ -0.71
HTT-203ENST00000506137 NOM1Q5C9Z4 860 aaKnown RBP10.64□□□□□ -0.71
HTT-203ENST00000506137 STK11IPQ8N1F8 1099 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 BHMTQ93088 406 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 NUCKS1Q9H1E3 243 aaKnown RBP10.64□□□□□ -0.71
HTT-203ENST00000506137 KNSTRNQ9Y448 316 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
HTT-203ENST00000506137 IKBKGQ9Y6K9 419 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 KDM5CP41229 1560 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 NEURL4Q96JN8 1562 aa10.64□□□□□ -0.71
HTT-203ENST00000506137 STRCP1A6NGW2 1772 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 PPFIA3O75145 1194 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 CCDC172P0C7W6 258 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 TGFB3P10600 412 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 ZNF132P52740 706 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 SLF2Q8IX21 1173 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 ERCC4Q92889 916 aaPredicted RBP10.63□□□□□ -0.71
HTT-203ENST00000506137 BORCS6Q96GS4 357 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 CDK5RAP3Q96JB5 506 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 CHCHD3Q9NX63 227 aaKnown RBP10.63□□□□□ -0.71
HTT-203ENST00000506137 TMCC3Q9ULS5 477 aa10.63□□□□□ -0.71
HTT-203ENST00000506137 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
HTT-203ENST00000506137 PHLPP1O60346 1717 aa10.62□□□□□ -0.71
HTT-203ENST00000506137 IQGAP2Q13576 1575 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms