RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 NFIXQ14938 502 aa9.11□□□□□ -0.95
NR1I3-221ENST00000505944 ERFEQ4G0M1 354 aa9.11□□□□□ -0.95
NR1I3-221ENST00000505944 USPL1Q5W0Q7 1092 aa9.11□□□□□ -0.95
NR1I3-221ENST00000505944 LDHDQ86WU2 507 aa9.11□□□□□ -0.95
NR1I3-221ENST00000505944 C2CD5Q86YS7 1000 aa9.11□□□□□ -0.95
NR1I3-221ENST00000505944 CLEC11AQ9Y240 323 aa9.11□□□□□ -0.95
NR1I3-221ENST00000505944 COL15A1P39059 1388 aa9.11□□□□□ -0.95
NR1I3-221ENST00000505944 ANKRD31Q8N7Z5 1873 aa9.11□□□□□ -0.95
NR1I3-221ENST00000505944 SCN7AQ01118 1682 aa9.1□□□□□ -0.95
NR1I3-221ENST00000505944 DIAPH1O60610 1272 aaKnown RBP9.1□□□□□ -0.95
NR1I3-221ENST00000505944 SERPINB2P05120 415 aa9.1□□□□□ -0.95
NR1I3-221ENST00000505944 AKAP4Q5JQC9 854 aa9.1□□□□□ -0.95
NR1I3-221ENST00000505944 SP7Q8TDD2 431 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-221ENST00000505944 BRIP1Q9BX63 1249 aa9.1□□□□□ -0.95
NR1I3-221ENST00000505944 TAOK3Q9H2K8 898 aa9.1□□□□□ -0.95
NR1I3-221ENST00000505944 MRS2Q9HD23 443 aa9.1□□□□□ -0.95
NR1I3-221ENST00000505944 COL11A2P13942 1736 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-221ENST00000505944 CACNA1SQ13698 1873 aa9.1□□□□□ -0.95
NR1I3-221ENST00000505944 SCN4AP35499 1836 aa9.1□□□□□ -0.95
NR1I3-221ENST00000505944 FER1L6Q2WGJ9 1857 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 NFKBIEO00221 500 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 STARD3NLO95772 234 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 NPM2Q86SE8 214 aaKnown RBP9.09□□□□□ -0.95
NR1I3-221ENST00000505944 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 CCDC146Q8IYE0 955 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 CNKSR1Q969H4 720 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 L3MBTL3Q96JM7 780 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-221ENST00000505944 CFAP53Q96M91 514 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 TEX13AQ9BXU3 409 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-221ENST00000505944 SLC52A2Q9HAB3 445 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 CARMIL3Q8ND23 1372 aa9.09□□□□□ -0.95
NR1I3-221ENST00000505944 TMEM88BA6NKF7 163 aa9.08□□□□□ -0.96
NR1I3-221ENST00000505944 POTECB2RU33 542 aa9.08□□□□□ -0.96
NR1I3-221ENST00000505944 U2AF1L5P0DN76 240 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-221ENST00000505944 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-221ENST00000505944 U2AF1Q01081 240 aaKnown RBP eCLIP9.08□□□□□ -0.96
NR1I3-221ENST00000505944 MAP2K1Q02750 393 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-221ENST00000505944 MKRN1Q9UHC7 482 aaKnown RBP9.08□□□□□ -0.96
NR1I3-221ENST00000505944 ARFGEF2Q9Y6D5 1785 aa9.08□□□□□ -0.96
NR1I3-221ENST00000505944 PASKQ96RG2 1323 aa9.07□□□□□ -0.96
NR1I3-221ENST00000505944 SIPA1L3O60292 1781 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-221ENST00000505944 FOXN1O15353 648 aa9.07□□□□□ -0.96
NR1I3-221ENST00000505944 STYK1Q6J9G0 422 aa9.07□□□□□ -0.96
NR1I3-221ENST00000505944 PNMA8AQ86V59 439 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-221ENST00000505944 FAM9BQ8IZU0 186 aa9.07□□□□□ -0.96
NR1I3-221ENST00000505944 ZBTB1Q9Y2K1 713 aa9.07□□□□□ -0.96
NR1I3-221ENST00000505944 BCORQ6W2J9 1755 aa9.07□□□□□ -0.96
NR1I3-221ENST00000505944 RGL2O15211 777 aa9.06□□□□□ -0.96
NR1I3-221ENST00000505944 ST5P78524 1137 aa9.06□□□□□ -0.96
NR1I3-221ENST00000505944 TTC5Q8N0Z6 440 aa9.06□□□□□ -0.96
NR1I3-221ENST00000505944 ZNF622Q969S3 477 aaKnown RBP eCLIP9.06□□□□□ -0.96
NR1I3-221ENST00000505944 WBP1LQ9NX94 342 aa9.06□□□□□ -0.96
NR1I3-221ENST00000505944 RASSF10A6NK89 507 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 NPHP1O15259 732 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 RNMTO43148 476 aaKnown RBP9.05□□□□□ -0.96
NR1I3-221ENST00000505944 C21orf2O43822 256 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 PRKAR2BP31323 418 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 EIF5P55010 431 aaKnown RBP9.05□□□□□ -0.96
NR1I3-221ENST00000505944 SLC39A6Q13433 755 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 CNBD1Q8NA66 436 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 MASTLQ96GX5 879 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 BEGAINQ9BUH8 593 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 TAF1DQ9H5J8 278 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-221ENST00000505944 BCL2L12Q9HB09 334 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 LGR6Q9HBX8 967 aa9.05□□□□□ -0.96
NR1I3-221ENST00000505944 IL6STP40189 918 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-221ENST00000505944 ECE1P42892 770 aa9.04□□□□□ -0.96
NR1I3-221ENST00000505944 WDR43Q15061 677 aaKnown RBP eCLIP9.04□□□□□ -0.96
NR1I3-221ENST00000505944 GRIPAP1Q4V328 841 aa9.04□□□□□ -0.96
NR1I3-221ENST00000505944 CCDC93Q567U6 631 aa9.04□□□□□ -0.96
NR1I3-221ENST00000505944 RTKN2Q8IZC4 609 aa9.04□□□□□ -0.96
NR1I3-221ENST00000505944 PHACTR3Q96KR7 559 aa9.04□□□□□ -0.96
NR1I3-221ENST00000505944 SETDB2Q96T68 719 aa9.04□□□□□ -0.96
NR1I3-221ENST00000505944 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
NR1I3-221ENST00000505944 ADAMTS8Q9UP79 889 aa9.04□□□□□ -0.96
NR1I3-221ENST00000505944 RRP7AQ9Y3A4 280 aaKnown RBP9.04□□□□□ -0.96
NR1I3-221ENST00000505944 HAX1O00165 279 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 CA12O43570 354 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 DDNO94850 711 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-221ENST00000505944 PRR29P0C7W0 189 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 SRGNP10124 158 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 VEGFBP49765 207 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 DEFB115Q30KQ5 88 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 PRR5LQ6MZQ0 368 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 PRPF40BQ6NWY9 871 aaKnown RBP9.03□□□□□ -0.96
NR1I3-221ENST00000505944 IFNLR1Q8IU57 520 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-221ENST00000505944 ABHD8Q96I13 439 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 HACL1Q9UJ83 578 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 NUDCQ9Y266 331 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 ZNF652Q9Y2D9 606 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-221ENST00000505944 SLX4Q8IY92 1834 aa9.03□□□□□ -0.96
NR1I3-221ENST00000505944 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-221ENST00000505944 CANXP27824 592 aaKnown RBP9.02□□□□□ -0.97
NR1I3-221ENST00000505944 RGS19P49795 217 aa9.02□□□□□ -0.97
NR1I3-221ENST00000505944 LBX1P52954 281 aa9.02□□□□□ -0.97
NR1I3-221ENST00000505944 MLLT1Q03111 559 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-221ENST00000505944 MTHFSDQ2M296 383 aaKnown RBP9.02□□□□□ -0.97
NR1I3-221ENST00000505944 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms