RNA–Protein interactions for RNA: ENST00000505871.6

SH3D21-205, Transcript of SH3 domain containing 21, humanhuman

TSL 2 BASIC

Gene SH3D21, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-205ENST00000505871 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
SH3D21-205ENST00000505871 TOM1O60784 492 aa17.65■□□□□ 0.42
SH3D21-205ENST00000505871 KAZALD1Q96I82 304 aa17.65■□□□□ 0.42
SH3D21-205ENST00000505871 TBC1D2Q9BYX2 928 aa17.65■□□□□ 0.42
SH3D21-205ENST00000505871 PTCD1O75127 700 aaKnown RBP17.64■□□□□ 0.42
SH3D21-205ENST00000505871 IL1RAPL2Q9NP60 686 aa17.64■□□□□ 0.42
SH3D21-205ENST00000505871 NRAPQ86VF7 1730 aa17.64■□□□□ 0.41
SH3D21-205ENST00000505871 AFDNP55196 1824 aaKnown RBP17.64■□□□□ 0.41
SH3D21-205ENST00000505871 ERC1Q8IUD2 1116 aa17.64■□□□□ 0.41
SH3D21-205ENST00000505871 CDCA7Q9BWT1 371 aaPredicted RBP17.64■□□□□ 0.41
SH3D21-205ENST00000505871 ITGB4P16144 1822 aa17.63■□□□□ 0.41
SH3D21-205ENST00000505871 EXOC5O00471 708 aa17.63■□□□□ 0.41
SH3D21-205ENST00000505871 VSIG10Q8N0Z9 540 aa17.63■□□□□ 0.41
SH3D21-205ENST00000505871 BICC1Q9H694 974 aaKnown RBP17.63■□□□□ 0.41
SH3D21-205ENST00000505871 COL15A1P39059 1388 aa17.63■□□□□ 0.41
SH3D21-205ENST00000505871 PIGBQ92521 554 aa17.63■□□□□ 0.41
SH3D21-205ENST00000505871 TEX13AQ9BXU3 409 aaPredicted RBP17.63■□□□□ 0.41
SH3D21-205ENST00000505871 OS9Q13438 667 aaPredicted RBP17.62■□□□□ 0.41
SH3D21-205ENST00000505871 THRAP3Q9Y2W1 955 aaKnown RBP17.62■□□□□ 0.41
SH3D21-205ENST00000505871 NUP188Q5SRE5 1749 aa17.62■□□□□ 0.41
SH3D21-205ENST00000505871 ADAMTS2O95450 1211 aa17.61■□□□□ 0.41
SH3D21-205ENST00000505871 A1BGP04217 495 aa17.61■□□□□ 0.41
SH3D21-205ENST00000505871 TSHZ3Q63HK5 1081 aa17.61■□□□□ 0.41
SH3D21-205ENST00000505871 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
SH3D21-205ENST00000505871 BCL9O00512 1426 aa17.6■□□□□ 0.41
SH3D21-205ENST00000505871 SPATA31A1Q5TZJ5 1347 aa17.6■□□□□ 0.41
SH3D21-205ENST00000505871 NBR1Q14596 966 aa17.6■□□□□ 0.41
SH3D21-205ENST00000505871 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
SH3D21-205ENST00000505871 ATG3Q9NT62 314 aa17.6■□□□□ 0.41
SH3D21-205ENST00000505871 ASAP1Q9ULH1 1129 aa17.6■□□□□ 0.41
SH3D21-205ENST00000505871 USP42Q9H9J4 1324 aaKnown RBP17.6■□□□□ 0.41
SH3D21-205ENST00000505871 NWD2Q9ULI1 1742 aa17.59■□□□□ 0.41
SH3D21-205ENST00000505871 REC8O95072 547 aa17.59■□□□□ 0.41
SH3D21-205ENST00000505871 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
SH3D21-205ENST00000505871 SNX21Q969T3 373 aa17.59■□□□□ 0.41
SH3D21-205ENST00000505871 KIF2CQ99661 725 aa17.59■□□□□ 0.41
SH3D21-205ENST00000505871 ERC2O15083 957 aa17.59■□□□□ 0.41
SH3D21-205ENST00000505871 TTLL7Q6ZT98 887 aa17.59■□□□□ 0.41
SH3D21-205ENST00000505871 USP26Q9BXU7 913 aa17.59■□□□□ 0.41
SH3D21-205ENST00000505871 ATP5J2-PTCD1G3V325 749 aa17.58■□□□□ 0.4
SH3D21-205ENST00000505871 PIP4K2BP78356 416 aa17.58■□□□□ 0.4
SH3D21-205ENST00000505871 HSCBQ8IWL3 235 aa17.58■□□□□ 0.4
SH3D21-205ENST00000505871 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.4
SH3D21-205ENST00000505871 TTC41PQ6P2S7 1318 aa17.58■□□□□ 0.4
SH3D21-205ENST00000505871 A0A087WZG4 1122 aa17.57■□□□□ 0.4
SH3D21-205ENST00000505871 TRIM6-TRIM34B2RNG4 842 aa17.57■□□□□ 0.4
SH3D21-205ENST00000505871 G3BP1Q13283 466 aaKnown RBP eCLIP17.57■□□□□ 0.4
SH3D21-205ENST00000505871 PI4K2BQ8TCG2 481 aa17.57■□□□□ 0.4
SH3D21-205ENST00000505871 RABL6Q3YEC7 729 aaPredicted RBP17.57■□□□□ 0.4
SH3D21-205ENST00000505871 EPHA10Q5JZY3 1008 aa17.57■□□□□ 0.4
SH3D21-205ENST00000505871 UBE3BQ7Z3V4 1068 aa17.57■□□□□ 0.4
SH3D21-205ENST00000505871 SLIT2O94813 1529 aa17.56■□□□□ 0.4
SH3D21-205ENST00000505871 STARD3NLO95772 234 aa17.56■□□□□ 0.4
SH3D21-205ENST00000505871 CASP7P55210 303 aa17.56■□□□□ 0.4
SH3D21-205ENST00000505871 RILPL2Q969X0 211 aa17.56■□□□□ 0.4
SH3D21-205ENST00000505871 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
SH3D21-205ENST00000505871 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
SH3D21-205ENST00000505871 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
SH3D21-205ENST00000505871 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
SH3D21-205ENST00000505871 H7C1W4 665 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
SH3D21-205ENST00000505871 SPATA31A5Q5VU36 1347 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 SPATA31A7Q8IWB4 1347 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 CHMLP26374 656 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 DDB1Q16531 1140 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 CCDC191Q8NCU4 936 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 GPATCH3Q96I76 525 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 ESYT1Q9BSJ8 1104 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
SH3D21-205ENST00000505871 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
SH3D21-205ENST00000505871 DOT1LQ8TEK3 1739 aa17.54■□□□□ 0.4
SH3D21-205ENST00000505871 GLRX3O76003 335 aaKnown RBP17.54■□□□□ 0.4
SH3D21-205ENST00000505871 SASH1O94885 1247 aa17.54■□□□□ 0.4
SH3D21-205ENST00000505871 ZBTB3Q9H5J0 574 aa17.54■□□□□ 0.4
SH3D21-205ENST00000505871 TJP1Q07157 1748 aa17.54■□□□□ 0.4
SH3D21-205ENST00000505871 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
SH3D21-205ENST00000505871 AK9Q5TCS8 1911 aa17.53■□□□□ 0.4
SH3D21-205ENST00000505871 UNC5CLQ8IV45 518 aa17.53■□□□□ 0.4
SH3D21-205ENST00000505871 ANTXR1Q9H6X2 564 aa17.53■□□□□ 0.4
SH3D21-205ENST00000505871 RFX5P48382 616 aaPredicted RBP17.53■□□□□ 0.4
SH3D21-205ENST00000505871 BARGINQ6ZT62 677 aa17.53■□□□□ 0.4
SH3D21-205ENST00000505871 ECHDC1Q9NTX5 307 aa17.53■□□□□ 0.4
SH3D21-205ENST00000505871 RABEP1Q15276 862 aa17.52■□□□□ 0.4
SH3D21-205ENST00000505871 CNTROBQ8N137 903 aa17.52■□□□□ 0.4
SH3D21-205ENST00000505871 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
SH3D21-205ENST00000505871 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.39
SH3D21-205ENST00000505871 AACSQ86V21 672 aa17.52■□□□□ 0.39
SH3D21-205ENST00000505871 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.39
SH3D21-205ENST00000505871 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
SH3D21-205ENST00000505871 KIF6Q6ZMV9 814 aa17.51■□□□□ 0.39
SH3D21-205ENST00000505871 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
SH3D21-205ENST00000505871 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
SH3D21-205ENST00000505871 TCIRG1Q13488 830 aa17.51■□□□□ 0.39
SH3D21-205ENST00000505871 SIL1Q9H173 461 aa17.51■□□□□ 0.39
SH3D21-205ENST00000505871 EPB41L2O43491 1005 aaKnown RBP17.5■□□□□ 0.39
SH3D21-205ENST00000505871 CYP19A1P11511 503 aaPredicted RBP17.5■□□□□ 0.39
SH3D21-205ENST00000505871 FOXO4P98177 505 aa17.5■□□□□ 0.39
SH3D21-205ENST00000505871 PTPN12Q05209 780 aaKnown RBP17.5■□□□□ 0.39
SH3D21-205ENST00000505871 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
SH3D21-205ENST00000505871 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms