RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 KRTAP4-7Q9BYR0 210 aa6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 ALG2Q9H553 416 aa6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 KLF15Q9UIH9 416 aa6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 PRR12Q9ULL5 1215 aa6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 PALM3A6NDB9 673 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-208ENST00000505553 LMOD1P29536 600 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-208ENST00000505553 C1orf216Q8TAB5 229 aa6.47□□□□□ -1.37
TRAPPC13-208ENST00000505553 FHDC1Q9C0D6 1143 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-208ENST00000505553 HRH3Q9Y5N1 445 aa6.47□□□□□ -1.37
TRAPPC13-208ENST00000505553 GPR37L1O60883 481 aa6.46□□□□□ -1.38
TRAPPC13-208ENST00000505553 MYCP01106 439 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC13-208ENST00000505553 SEMA3FQ13275 785 aa6.46□□□□□ -1.38
TRAPPC13-208ENST00000505553 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
TRAPPC13-208ENST00000505553 ZNF468Q5VIY5 522 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC13-208ENST00000505553 DNAAF2Q9NVR5 837 aaKnown RBP6.46□□□□□ -1.38
TRAPPC13-208ENST00000505553 ELOA3CA0A087WX78 387 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-208ENST00000505553 ELOA3DA6NLF2 546 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-208ENST00000505553 C9orf172C9J069 976 aa6.45□□□□□ -1.38
TRAPPC13-208ENST00000505553 ATG7O95352 703 aa6.45□□□□□ -1.38
TRAPPC13-208ENST00000505553 MAPTP10636 758 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-208ENST00000505553 ELOA3BQ3SY89 546 aa6.45□□□□□ -1.38
TRAPPC13-208ENST00000505553 ELOA3Q8NG57 546 aa6.45□□□□□ -1.38
TRAPPC13-208ENST00000505553 TFIP11Q9UBB9 837 aaKnown RBP6.45□□□□□ -1.38
TRAPPC13-208ENST00000505553 CD33P20138 364 aa6.44□□□□□ -1.38
TRAPPC13-208ENST00000505553 RBM25P49756 843 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-208ENST00000505553 PCBP4P57723 403 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-208ENST00000505553 TNP2Q05952 138 aa6.44□□□□□ -1.38
TRAPPC13-208ENST00000505553 PPARGC1BQ86YN6 1023 aaKnown RBP6.44□□□□□ -1.38
TRAPPC13-208ENST00000505553 FOXD4L4Q8WXT5 416 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC13-208ENST00000505553 VRTNQ9H8Y1 702 aa6.44□□□□□ -1.38
TRAPPC13-208ENST00000505553 DCDC2BA2VCK2 349 aa6.43□□□□□ -1.38
TRAPPC13-208ENST00000505553 KHNYNO15037 678 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-208ENST00000505553 ELNP15502 786 aa6.43□□□□□ -1.38
TRAPPC13-208ENST00000505553 EIF4G2P78344 907 aaKnown RBP eCLIP6.43□□□□□ -1.38
TRAPPC13-208ENST00000505553 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
TRAPPC13-208ENST00000505553 CEP126Q9P2H0 1117 aa6.43□□□□□ -1.38
TRAPPC13-208ENST00000505553 COL17A1Q9UMD9 1497 aaPredicted RBP6.43□□□□□ -1.38
TRAPPC13-208ENST00000505553 E9PSI1 815 aa6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 CCDC27Q2M243 656 aa6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 PLA2G4AP47712 749 aa6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 UCN2Q96RP3 112 aa6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 PRDM6Q9NQX0 595 aa6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 AMOTL2Q9Y2J4 779 aa6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 MAFBQ9Y5Q3 323 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 IVNS1ABPQ9Y6Y0 642 aa6.42□□□□□ -1.38
TRAPPC13-208ENST00000505553 SND1Q7KZF4 910 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRAPPC13-208ENST00000505553 M0R082 166 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 ATP9BO43861 1147 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 FAM157BP0CG42 384 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 NRG1Q02297 640 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 USP4Q13107 963 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 ADGRE1Q14246 886 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 TLR1Q15399 786 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 GRIK4Q16099 956 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 SLFNL1Q499Z3 407 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 ARSJQ5FYB0 599 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 TXNRD3Q86VQ6 643 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 ZNF417Q8TAU3 575 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 AIDAQ96BJ3 306 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 CCDC85AQ96PX6 553 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 FMNL2Q96PY5 1086 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 ZNF587Q96SQ5 575 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 CDCA7Q9BWT1 371 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 MARK1Q9P0L2 795 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 GJA3Q9Y6H8 435 aa6.4□□□□□ -1.39
TRAPPC13-208ENST00000505553 A0A1W2PNR3 127 aa6.39□□□□□ -1.39
TRAPPC13-208ENST00000505553 TMEM88BA6NKF7 163 aa6.39□□□□□ -1.39
TRAPPC13-208ENST00000505553 ATP4AP20648 1035 aa6.39□□□□□ -1.39
TRAPPC13-208ENST00000505553 LAMC2Q13753 1193 aa6.39□□□□□ -1.39
TRAPPC13-208ENST00000505553 CDCA8Q53HL2 280 aa6.39□□□□□ -1.39
TRAPPC13-208ENST00000505553 RNF112Q9ULX5 631 aa6.39□□□□□ -1.39
TRAPPC13-208ENST00000505553 MBTPS1Q14703 1052 aa6.38□□□□□ -1.39
TRAPPC13-208ENST00000505553 NBPF1Q3BBV0 1214 aa6.38□□□□□ -1.39
TRAPPC13-208ENST00000505553 TP53INP1Q96A56 240 aa6.38□□□□□ -1.39
TRAPPC13-208ENST00000505553 SIRT1Q96EB6 747 aa6.38□□□□□ -1.39
TRAPPC13-208ENST00000505553 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-208ENST00000505553 DOLKQ9UPQ8 538 aa6.38□□□□□ -1.39
TRAPPC13-208ENST00000505553 GNEQ9Y223 722 aaKnown RBP6.38□□□□□ -1.39
TRAPPC13-208ENST00000505553 CARNS1A5YM72 827 aa6.37□□□□□ -1.39
TRAPPC13-208ENST00000505553 ADARB2-AS1A8MUL3 147 aa6.37□□□□□ -1.39
TRAPPC13-208ENST00000505553 SIN3BO75182 1162 aa6.37□□□□□ -1.39
TRAPPC13-208ENST00000505553 TATP17735 454 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC13-208ENST00000505553 ELOAQ14241 798 aaKnown RBP6.37□□□□□ -1.39
TRAPPC13-208ENST00000505553 SYT9Q86SS6 491 aa6.37□□□□□ -1.39
TRAPPC13-208ENST00000505553 NFATC2IPQ8NCF5 419 aa6.36□□□□□ -1.39
TRAPPC13-208ENST00000505553 CCER1Q8TC90 406 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC13-208ENST00000505553 ZNF428Q96B54 188 aa6.36□□□□□ -1.39
TRAPPC13-208ENST00000505553 HCN2Q9UL51 889 aa6.36□□□□□ -1.39
TRAPPC13-208ENST00000505553 FZD5Q13467 585 aa6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 COL9A3Q14050 684 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 TSGA10IPQ3SY00 556 aa6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 TRAPPC3LQ5T215 181 aa6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 SAMD5Q5TGI4 173 aa6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 MICALL1Q8N3F8 863 aa6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 PHTF2Q8N3S3 785 aa6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 LENG1Q96BZ8 264 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 MDFIQ99750 246 aa6.35□□□□□ -1.39
TRAPPC13-208ENST00000505553 IRAK1P51617 712 aa6.34□□□□□ -1.39
TRAPPC13-208ENST00000505553 OXLD1Q5BKU9 147 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 367.3 ms