RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 ZNF652Q9Y2D9 606 aa11.3□□□□□ -0.6
CTSB-205ENST00000505496 PXDNLA1KZ92 1463 aa11.3□□□□□ -0.6
CTSB-205ENST00000505496 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
CTSB-205ENST00000505496 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
CTSB-205ENST00000505496 BCORQ6W2J9 1755 aa11.29□□□□□ -0.6
CTSB-205ENST00000505496 ATP10DQ9P241 1426 aa11.29□□□□□ -0.6
CTSB-205ENST00000505496 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
CTSB-205ENST00000505496 SETDB2Q96T68 719 aa11.29□□□□□ -0.6
CTSB-205ENST00000505496 CHMP4AQ9BY43 222 aa11.29□□□□□ -0.6
CTSB-205ENST00000505496 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
CTSB-205ENST00000505496 DBF4Q9UBU7 674 aaPredicted RBP11.29□□□□□ -0.6
CTSB-205ENST00000505496 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
CTSB-205ENST00000505496 ANXA1P04083 346 aa11.28□□□□□ -0.6
CTSB-205ENST00000505496 KCNA3P22001 575 aa11.28□□□□□ -0.6
CTSB-205ENST00000505496 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
CTSB-205ENST00000505496 GIGYF2Q6Y7W6 1299 aaKnown RBP11.28□□□□□ -0.6
CTSB-205ENST00000505496 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
CTSB-205ENST00000505496 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
CTSB-205ENST00000505496 COPS6Q7L5N1 327 aa11.28□□□□□ -0.6
CTSB-205ENST00000505496 NECTIN2Q92692 538 aa11.28□□□□□ -0.6
CTSB-205ENST00000505496 HYPKQ9NX55 129 aa11.28□□□□□ -0.6
CTSB-205ENST00000505496 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
CTSB-205ENST00000505496 ELL2O00472 640 aaPredicted RBP11.27□□□□□ -0.61
CTSB-205ENST00000505496 ZNF34Q8IZ26 560 aa11.27□□□□□ -0.61
CTSB-205ENST00000505496 XAGE3Q8WTP9 111 aa11.27□□□□□ -0.61
CTSB-205ENST00000505496 BRIP1Q9BX63 1249 aa11.27□□□□□ -0.61
CTSB-205ENST00000505496 NIP7Q9Y221 180 aaKnown RBP eCLIP11.27□□□□□ -0.613e-7■■■■□ 21.9
CTSB-205ENST00000505496 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
CTSB-205ENST00000505496 A0A0G2JLW4 131 aa11.26□□□□□ -0.61
CTSB-205ENST00000505496 DCAF8L1A6NGE4 600 aa11.26□□□□□ -0.61
CTSB-205ENST00000505496 DPEP1P16444 411 aa11.26□□□□□ -0.61
CTSB-205ENST00000505496 YBX3P16989 372 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTSB-205ENST00000505496 TWISTNBQ3B726 338 aaPredicted RBP11.26□□□□□ -0.61
CTSB-205ENST00000505496 CCDC30Q5VVM6 783 aa11.26□□□□□ -0.61
CTSB-205ENST00000505496 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
CTSB-205ENST00000505496 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
CTSB-205ENST00000505496 IBTKQ9P2D0 1353 aaPredicted RBP11.26□□□□□ -0.61
CTSB-205ENST00000505496 KLRG2A4D1S0 409 aaPredicted RBP11.25□□□□□ -0.61
CTSB-205ENST00000505496 VAMP4O75379 141 aa11.25□□□□□ -0.61
CTSB-205ENST00000505496 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
CTSB-205ENST00000505496 GPR162Q16538 588 aa11.25□□□□□ -0.61
CTSB-205ENST00000505496 NBPF5PQ86XG9 351 aaPredicted RBP11.25□□□□□ -0.61
CTSB-205ENST00000505496 CNBD1Q8NA66 436 aa11.25□□□□□ -0.61
CTSB-205ENST00000505496 PLBD2Q8NHP8 589 aa11.25□□□□□ -0.61
CTSB-205ENST00000505496 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
CTSB-205ENST00000505496 UBN2Q6ZU65 1347 aa11.25□□□□□ -0.61
CTSB-205ENST00000505496 E9PSI1 815 aa11.24□□□□□ -0.61
CTSB-205ENST00000505496 GRIN3BO60391 1043 aa11.24□□□□□ -0.61
CTSB-205ENST00000505496 EXOSC9Q06265 439 aaKnown RBP11.24□□□□□ -0.61
CTSB-205ENST00000505496 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
CTSB-205ENST00000505496 TPTE2Q6XPS3 522 aa11.24□□□□□ -0.61
CTSB-205ENST00000505496 ANKRD13DQ6ZTN6 518 aa11.24□□□□□ -0.61
CTSB-205ENST00000505496 TRMT2AQ8IZ69 625 aaKnown RBP11.24□□□□□ -0.61
CTSB-205ENST00000505496 AFDNP55196 1824 aaKnown RBP11.23□□□□□ -0.61
CTSB-205ENST00000505496 CHRNA5P30532 468 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 PDE6BP35913 854 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 ST5P78524 1137 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 SLFN5Q08AF3 891 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 AIMP1Q12904 312 aaKnown RBP11.23□□□□□ -0.61
CTSB-205ENST00000505496 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
CTSB-205ENST00000505496 TCIRG1Q13488 830 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 NYXQ9GZU5 481 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 PHAXQ9H814 394 aaKnown RBP11.23□□□□□ -0.61
CTSB-205ENST00000505496 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 RIC1Q4ADV7 1423 aa11.23□□□□□ -0.61
CTSB-205ENST00000505496 NTSR2O95665 410 aa11.22□□□□□ -0.61
CTSB-205ENST00000505496 SUSD4Q5VX71 490 aa11.22□□□□□ -0.61
CTSB-205ENST00000505496 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
CTSB-205ENST00000505496 ISCA1Q9BUE6 129 aa11.22□□□□□ -0.61
CTSB-205ENST00000505496 H0YIN7 160 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 SRGNP10124 158 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 GPTP24298 496 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 CRY2Q49AN0 593 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 SLC10A5Q5PT55 438 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 PPP1R42Q7Z4L9 355 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 NLRP10Q86W26 655 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 C2CD5Q86YS7 1000 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 STK31Q9BXU1 1019 aa11.21□□□□□ -0.61
CTSB-205ENST00000505496 ABCC12Q96J65 1359 aa11.2□□□□□ -0.62
CTSB-205ENST00000505496 SLC4A2P04920 1241 aa11.2□□□□□ -0.62
CTSB-205ENST00000505496 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
CTSB-205ENST00000505496 STYK1Q6J9G0 422 aa11.2□□□□□ -0.62
CTSB-205ENST00000505496 PELP1Q8IZL8 1130 aaKnown RBP11.2□□□□□ -0.62
CTSB-205ENST00000505496 UTP14AQ9BVJ6 771 aaKnown RBP11.2□□□□□ -0.62
CTSB-205ENST00000505496 NUP98P52948 1817 aa11.2□□□□□ -0.62
CTSB-205ENST00000505496 BRCA1P38398 1863 aaKnown RBP11.19□□□□□ -0.62
CTSB-205ENST00000505496 ADCY9O60503 1353 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 N4BP2Q86UW6 1770 aaPredicted RBP11.19□□□□□ -0.62
CTSB-205ENST00000505496 NPHP1O15259 732 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 DDX58O95786 925 aaKnown RBP11.19□□□□□ -0.62
CTSB-205ENST00000505496 ERFEQ4G0M1 354 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 KSR2Q6VAB6 950 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 G2E3Q7L622 706 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 MASTLQ96GX5 879 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 BCS1LQ9Y276 419 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms