RNA–Protein interactions for RNA: ENST00000505469.1

PPARGC1A-203, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 2

Gene PPARGC1A, Length 406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-203ENST00000505469 CHMP4AQ9BY43 222 aa11.38□□□□□ -0.59
PPARGC1A-203ENST00000505469 ADAMTS8Q9UP79 889 aa11.38□□□□□ -0.59
PPARGC1A-203ENST00000505469 IBTKQ9P2D0 1353 aaPredicted RBP11.38□□□□□ -0.59
PPARGC1A-203ENST00000505469 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
PPARGC1A-203ENST00000505469 LAMB2P55268 1798 aa11.37□□□□□ -0.59
PPARGC1A-203ENST00000505469 YY1P25490 414 aa11.37□□□□□ -0.59
PPARGC1A-203ENST00000505469 CANXP27824 592 aaKnown RBP11.37□□□□□ -0.59
PPARGC1A-203ENST00000505469 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
PPARGC1A-203ENST00000505469 SRP68Q9UHB9 627 aaKnown RBP11.37□□□□□ -0.59
PPARGC1A-203ENST00000505469 MYH3P11055 1940 aa11.37□□□□□ -0.59
PPARGC1A-203ENST00000505469 ATP10DQ9P241 1426 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 ERVV-1B6SEH8 477 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 CHL1O00533 1208 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 ANP32CO43423 234 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 KCNQ3O43525 872 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 DDR1Q08345 913 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 NFIXQ14938 502 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 SMIM5Q71RC9 77 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 NGEFQ8N5V2 710 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 BCL2L12Q9HB09 334 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 TSPYL4Q9UJ04 414 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
PPARGC1A-203ENST00000505469 CAMTA2O94983 1202 aa11.35□□□□□ -0.59
PPARGC1A-203ENST00000505469 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
PPARGC1A-203ENST00000505469 CCDC27Q2M243 656 aa11.35□□□□□ -0.59
PPARGC1A-203ENST00000505469 DZIP3Q86Y13 1208 aaKnown RBP11.35□□□□□ -0.59
PPARGC1A-203ENST00000505469 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
PPARGC1A-203ENST00000505469 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
PPARGC1A-203ENST00000505469 TNRC6CQ9HCJ0 1690 aaKnown RBP11.35□□□□□ -0.59
PPARGC1A-203ENST00000505469 ADCY9O60503 1353 aa11.34□□□□□ -0.59
PPARGC1A-203ENST00000505469 A1BGP04217 495 aa11.34□□□□□ -0.59
PPARGC1A-203ENST00000505469 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
PPARGC1A-203ENST00000505469 YBX3P16989 372 aaKnown RBP eCLIP11.34□□□□□ -0.59
PPARGC1A-203ENST00000505469 PIM2Q9P1W9 311 aa11.34□□□□□ -0.59
PPARGC1A-203ENST00000505469 SLX4Q8IY92 1834 aa11.34□□□□□ -0.59
PPARGC1A-203ENST00000505469 TIAM2Q8IVF5 1701 aa11.34□□□□□ -0.59
PPARGC1A-203ENST00000505469 RNF123Q5XPI4 1314 aa11.34□□□□□ -0.59
PPARGC1A-203ENST00000505469 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 SERPINB2P05120 415 aa11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 PDE6BP35913 854 aa11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 NBPF10Q6P3W6 841 aaKnown RBP11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 BRIP1Q9BX63 1249 aa11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 IFT57Q9NWB7 429 aa11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 ZC3H4Q9UPT8 1303 aaKnown RBP11.33□□□□□ -0.6
PPARGC1A-203ENST00000505469 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
PPARGC1A-203ENST00000505469 KCNA3P22001 575 aa11.32□□□□□ -0.6
PPARGC1A-203ENST00000505469 GNAI1P63096 354 aa11.32□□□□□ -0.6
PPARGC1A-203ENST00000505469 TBC1D2BQ9UPU7 963 aa11.32□□□□□ -0.6
PPARGC1A-203ENST00000505469 IL16Q14005 1332 aa11.32□□□□□ -0.6
PPARGC1A-203ENST00000505469 TBC1D9BQ66K14 1250 aa11.31□□□□□ -0.6
PPARGC1A-203ENST00000505469 KIF6Q6ZMV9 814 aa11.31□□□□□ -0.6
PPARGC1A-203ENST00000505469 CNBD1Q8NA66 436 aa11.31□□□□□ -0.6
PPARGC1A-203ENST00000505469 THUMPD2Q9BTF0 503 aaKnown RBP11.31□□□□□ -0.6
PPARGC1A-203ENST00000505469 MAP3K15Q6ZN16 1313 aa11.31□□□□□ -0.6
PPARGC1A-203ENST00000505469 DDX60Q8IY21 1712 aaKnown RBP11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 KLRG2A4D1S0 409 aaPredicted RBP11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 H0YIN7 160 aa11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 DPEP1P16444 411 aa11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 ST5P78524 1137 aa11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 DALRD3Q5D0E6 543 aaKnown RBP11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 LRP10Q7Z4F1 713 aa11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 CCDC146Q8IYE0 955 aa11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
PPARGC1A-203ENST00000505469 A0A0G2JLW4 131 aa11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 HAX1O00165 279 aa11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 APAF1O14727 1248 aa11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 HSP90AB3PQ58FF7 597 aa11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 PRR5LQ6MZQ0 368 aa11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 DDX21Q9NR30 783 aaKnown RBP eCLIP11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 ZNF330Q9Y3S2 320 aaPredicted RBP11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
PPARGC1A-203ENST00000505469 SCN4AP35499 1836 aa11.28□□□□□ -0.6
PPARGC1A-203ENST00000505469 NEUROD2Q15784 382 aa11.28□□□□□ -0.6
PPARGC1A-203ENST00000505469 PARP10Q53GL7 1025 aa11.28□□□□□ -0.6
PPARGC1A-203ENST00000505469 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
PPARGC1A-203ENST00000505469 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
PPARGC1A-203ENST00000505469 ZNF784Q8NCA9 323 aaPredicted RBP11.28□□□□□ -0.6
PPARGC1A-203ENST00000505469 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
PPARGC1A-203ENST00000505469 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
PPARGC1A-203ENST00000505469 LRRC37AA6NMS7 1700 aa11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 PDIA6Q15084 440 aa11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 STYK1Q6J9G0 422 aa11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 CNKSR1Q969H4 720 aa11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 HYPKQ9NX55 129 aa11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 NIP7Q9Y221 180 aaKnown RBP eCLIP11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 RRP7AQ9Y3A4 280 aaKnown RBP11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 LTBP3Q9NS15 1303 aa11.27□□□□□ -0.61
PPARGC1A-203ENST00000505469 SRGNP10124 158 aa11.26□□□□□ -0.61
PPARGC1A-203ENST00000505469 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
PPARGC1A-203ENST00000505469 ZNF34Q8IZ26 560 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms