RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 MCM2P49736 904 aa13.85□□□□□ -0.19
NFKB1-205ENST00000505458 XAGE3Q8WTP9 111 aa13.85□□□□□ -0.19
NFKB1-205ENST00000505458 KCPQ6ZWJ8 1503 aa13.85□□□□□ -0.19
NFKB1-205ENST00000505458 CNTROBQ8N137 903 aa13.85□□□□□ -0.19
NFKB1-205ENST00000505458 WNK3Q9BYP7 1800 aa13.84□□□□□ -0.19
NFKB1-205ENST00000505458 NEURL1BA8MQ27 555 aa13.84□□□□□ -0.19
NFKB1-205ENST00000505458 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
NFKB1-205ENST00000505458 ANXA1P04083 346 aa13.84□□□□□ -0.19
NFKB1-205ENST00000505458 GCKRQ14397 625 aa13.84□□□□□ -0.19
NFKB1-205ENST00000505458 G3BP1Q13283 466 aaKnown RBP eCLIP13.83□□□□□ -0.2
NFKB1-205ENST00000505458 COPS6Q7L5N1 327 aa13.83□□□□□ -0.2
NFKB1-205ENST00000505458 IL17RAQ96F46 866 aa13.83□□□□□ -0.2
NFKB1-205ENST00000505458 ESYT1Q9BSJ8 1104 aa13.83□□□□□ -0.2
NFKB1-205ENST00000505458 HIP1O00291 1037 aa13.83□□□□□ -0.2
NFKB1-205ENST00000505458 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
NFKB1-205ENST00000505458 NUP188Q5SRE5 1749 aa13.83□□□□□ -0.2
NFKB1-205ENST00000505458 LRP10Q7Z4F1 713 aa13.82□□□□□ -0.2
NFKB1-205ENST00000505458 RUFY2Q8WXA3 655 aa13.82□□□□□ -0.2
NFKB1-205ENST00000505458 KIF2CQ99661 725 aa13.82□□□□□ -0.2
NFKB1-205ENST00000505458 DISP2A7MBM2 1401 aa13.82□□□□□ -0.2
NFKB1-205ENST00000505458 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
NFKB1-205ENST00000505458 TRIM6-TRIM34B2RNG4 842 aa13.82□□□□□ -0.2
NFKB1-205ENST00000505458 HSP90AA1P07900 732 aaKnown RBP13.81□□□□□ -0.2
NFKB1-205ENST00000505458 AIMP1Q12904 312 aaKnown RBP13.81□□□□□ -0.2
NFKB1-205ENST00000505458 CHMLP26374 656 aa13.81□□□□□ -0.2
NFKB1-205ENST00000505458 SLKQ9H2G2 1235 aaPredicted RBP13.81□□□□□ -0.2
NFKB1-205ENST00000505458 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
NFKB1-205ENST00000505458 PRAMEF22A3QJZ6 481 aa13.81□□□□□ -0.2
NFKB1-205ENST00000505458 IFIT2P09913 472 aaKnown RBP13.81□□□□□ -0.2
NFKB1-205ENST00000505458 MYL6BP14649 208 aa13.81□□□□□ -0.2
NFKB1-205ENST00000505458 ECHDC1Q9NTX5 307 aa13.81□□□□□ -0.2
NFKB1-205ENST00000505458 IGKV5-2P06315 115 aa13.8□□□□□ -0.2
NFKB1-205ENST00000505458 CWF19L2Q2TBE0 894 aaKnown RBP13.8□□□□□ -0.2
NFKB1-205ENST00000505458 MYD88Q99836 296 aa13.8□□□□□ -0.2
NFKB1-205ENST00000505458 SUCLG2Q96I99 432 aa13.8□□□□□ -0.2
NFKB1-205ENST00000505458 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
NFKB1-205ENST00000505458 TOGARAM1Q9Y4F4 1720 aa13.8□□□□□ -0.2
NFKB1-205ENST00000505458 USP16Q9Y5T5 823 aa13.8□□□□□ -0.2
NFKB1-205ENST00000505458 RABL6Q3YEC7 729 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-205ENST00000505458 PI4K2BQ8TCG2 481 aa13.79□□□□□ -0.2
NFKB1-205ENST00000505458 COPRSQ9NQ92 184 aa13.79□□□□□ -0.2
NFKB1-205ENST00000505458 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
NFKB1-205ENST00000505458 COL16A1Q07092 1604 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-205ENST00000505458 BICC1Q9H694 974 aaKnown RBP13.79□□□□□ -0.2
NFKB1-205ENST00000505458 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
NFKB1-205ENST00000505458 THRAP3Q9Y2W1 955 aaKnown RBP13.79□□□□□ -0.2
NFKB1-205ENST00000505458 LTBP4Q8N2S1 1624 aa13.79□□□□□ -0.2
NFKB1-205ENST00000505458 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
NFKB1-205ENST00000505458 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
NFKB1-205ENST00000505458 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
NFKB1-205ENST00000505458 RAD50Q92878 1312 aa13.78□□□□□ -0.2
NFKB1-205ENST00000505458 CCDC191Q8NCU4 936 aa13.78□□□□□ -0.2
NFKB1-205ENST00000505458 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
NFKB1-205ENST00000505458 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
NFKB1-205ENST00000505458 DDIT3P35638 169 aa13.78□□□□□ -0.2
NFKB1-205ENST00000505458 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.2
NFKB1-205ENST00000505458 EVI5LQ96CN4 794 aa13.77□□□□□ -0.2
NFKB1-205ENST00000505458 CWC25Q9NXE8 425 aaPredicted RBP13.77□□□□□ -0.2
NFKB1-205ENST00000505458 BTG4Q9NY30 223 aa13.77□□□□□ -0.21
NFKB1-205ENST00000505458 ITGB4P16144 1822 aa13.77□□□□□ -0.21
NFKB1-205ENST00000505458 PHLPP1O60346 1717 aa13.77□□□□□ -0.21
NFKB1-205ENST00000505458 STARD3NLO95772 234 aa13.77□□□□□ -0.21
NFKB1-205ENST00000505458 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.21
NFKB1-205ENST00000505458 KIAA1211Q6ZU35 1233 aa13.76□□□□□ -0.21
NFKB1-205ENST00000505458 DDX54Q8TDD1 881 aaKnown RBP13.76□□□□□ -0.21
NFKB1-205ENST00000505458 ATG3Q9NT62 314 aa13.76□□□□□ -0.21
NFKB1-205ENST00000505458 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
NFKB1-205ENST00000505458 NUCB2P80303 420 aa13.76□□□□□ -0.21
NFKB1-205ENST00000505458 HSP90AB3PQ58FF7 597 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 KAZALD1Q96I82 304 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 DIAPH3Q9NSV4 1193 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 NRAPQ86VF7 1730 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 TRIM28Q13263 835 aaKnown RBP13.75□□□□□ -0.21
NFKB1-205ENST00000505458 GPR108Q9NPR9 543 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 H7C1W4 665 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
NFKB1-205ENST00000505458 AACSQ86V21 672 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 BCL11AQ9H165 835 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 TJP1Q07157 1748 aa13.75□□□□□ -0.21
NFKB1-205ENST00000505458 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
NFKB1-205ENST00000505458 A0A087WZG4 1122 aa13.74□□□□□ -0.21
NFKB1-205ENST00000505458 SGSM2O43147 1006 aa13.74□□□□□ -0.21
NFKB1-205ENST00000505458 GSE1Q14687 1217 aa13.74□□□□□ -0.21
NFKB1-205ENST00000505458 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
NFKB1-205ENST00000505458 EXOC5O00471 708 aa13.74□□□□□ -0.21
NFKB1-205ENST00000505458 GOLGA6L22H0YM25 854 aa13.73□□□□□ -0.21
NFKB1-205ENST00000505458 BCL9O00512 1426 aa13.73□□□□□ -0.21
NFKB1-205ENST00000505458 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
NFKB1-205ENST00000505458 MCM4P33991 863 aa13.73□□□□□ -0.21
NFKB1-205ENST00000505458 RAB3GAP1Q15042 981 aa13.73□□□□□ -0.21
NFKB1-205ENST00000505458 NBPF14Q5TI25 921 aa13.73□□□□□ -0.21
NFKB1-205ENST00000505458 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
NFKB1-205ENST00000505458 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
NFKB1-205ENST00000505458 CASP7P55210 303 aa13.73□□□□□ -0.21
NFKB1-205ENST00000505458 HSPA4P34932 840 aa13.72□□□□□ -0.21
NFKB1-205ENST00000505458 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
NFKB1-205ENST00000505458 SKOR2Q2VWA4 1001 aaPredicted RBP13.72□□□□□ -0.21
NFKB1-205ENST00000505458 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
NFKB1-205ENST00000505458 SPEF2Q9C093 1822 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms