RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
NR1I3-220ENST00000505005 E9PSI1 815 aa12.67□□□□□ -0.38
NR1I3-220ENST00000505005 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
NR1I3-220ENST00000505005 SERPINB2P05120 415 aa12.67□□□□□ -0.38
NR1I3-220ENST00000505005 GTF2E1P29083 439 aaPredicted RBP12.67□□□□□ -0.38
NR1I3-220ENST00000505005 SRP68Q9UHB9 627 aaKnown RBP12.67□□□□□ -0.38
NR1I3-220ENST00000505005 CACNA1FO60840 1977 aa12.67□□□□□ -0.38
NR1I3-220ENST00000505005 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
NR1I3-220ENST00000505005 POLRMTO00411 1230 aaKnown RBP12.66□□□□□ -0.38
NR1I3-220ENST00000505005 CT47B1P0C2W7 299 aaPredicted RBP12.66□□□□□ -0.38
NR1I3-220ENST00000505005 MYL6BP14649 208 aa12.66□□□□□ -0.38
NR1I3-220ENST00000505005 NFIXQ14938 502 aa12.66□□□□□ -0.38
NR1I3-220ENST00000505005 GPR162Q16538 588 aa12.66□□□□□ -0.38
NR1I3-220ENST00000505005 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
NR1I3-220ENST00000505005 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
NR1I3-220ENST00000505005 AMIGO3Q86WK7 504 aa12.66□□□□□ -0.38
NR1I3-220ENST00000505005 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
NR1I3-220ENST00000505005 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
NR1I3-220ENST00000505005 H0YIN7 160 aa12.65□□□□□ -0.38
NR1I3-220ENST00000505005 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
NR1I3-220ENST00000505005 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
NR1I3-220ENST00000505005 NBPF5PQ86XG9 351 aaPredicted RBP12.65□□□□□ -0.38
NR1I3-220ENST00000505005 CNBD1Q8NA66 436 aa12.65□□□□□ -0.38
NR1I3-220ENST00000505005 PIM2Q9P1W9 311 aa12.65□□□□□ -0.38
NR1I3-220ENST00000505005 NIP7Q9Y221 180 aaKnown RBP eCLIP12.65□□□□□ -0.38
NR1I3-220ENST00000505005 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
NR1I3-220ENST00000505005 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
NR1I3-220ENST00000505005 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
NR1I3-220ENST00000505005 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
NR1I3-220ENST00000505005 GRIPAP1Q4V328 841 aa12.63□□□□□ -0.39
NR1I3-220ENST00000505005 SOGA3Q5TF21 947 aa12.63□□□□□ -0.39
NR1I3-220ENST00000505005 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
NR1I3-220ENST00000505005 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
NR1I3-220ENST00000505005 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
NR1I3-220ENST00000505005 SCN7AQ01118 1682 aa12.63□□□□□ -0.39
NR1I3-220ENST00000505005 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 ATP10DQ9P241 1426 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 ALDH1B1P30837 517 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 PDIA6Q15084 440 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 TMX4Q9H1E5 349 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-220ENST00000505005 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-220ENST00000505005 KIF13BQ9NQT8 1826 aa12.62□□□□□ -0.39
NR1I3-220ENST00000505005 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
NR1I3-220ENST00000505005 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
NR1I3-220ENST00000505005 TRIM28Q13263 835 aaKnown RBP12.61□□□□□ -0.39
NR1I3-220ENST00000505005 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
NR1I3-220ENST00000505005 DALRD3Q5D0E6 543 aaKnown RBP12.61□□□□□ -0.39
NR1I3-220ENST00000505005 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
NR1I3-220ENST00000505005 MIER1Q8N108 512 aa12.61□□□□□ -0.39
NR1I3-220ENST00000505005 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
NR1I3-220ENST00000505005 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
NR1I3-220ENST00000505005 DDR1Q08345 913 aa12.6□□□□□ -0.39
NR1I3-220ENST00000505005 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
NR1I3-220ENST00000505005 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
NR1I3-220ENST00000505005 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
NR1I3-220ENST00000505005 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
NR1I3-220ENST00000505005 NUP98P52948 1817 aa12.6□□□□□ -0.39
NR1I3-220ENST00000505005 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
NR1I3-220ENST00000505005 NRXN2Q9P2S2 1712 aa12.59□□□□□ -0.39
NR1I3-220ENST00000505005 ELL2O00472 640 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-220ENST00000505005 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
NR1I3-220ENST00000505005 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
NR1I3-220ENST00000505005 LRP10Q7Z4F1 713 aa12.59□□□□□ -0.39
NR1I3-220ENST00000505005 TTLL6Q8N841 843 aa12.59□□□□□ -0.39
NR1I3-220ENST00000505005 TSR2Q969E8 191 aaKnown RBP12.59□□□□□ -0.39
NR1I3-220ENST00000505005 MASTLQ96GX5 879 aa12.59□□□□□ -0.39
NR1I3-220ENST00000505005 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
NR1I3-220ENST00000505005 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
NR1I3-220ENST00000505005 VAMP4O75379 141 aa12.58□□□□□ -0.4
NR1I3-220ENST00000505005 NPR1P16066 1061 aa12.58□□□□□ -0.4
NR1I3-220ENST00000505005 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.4
NR1I3-220ENST00000505005 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
NR1I3-220ENST00000505005 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
NR1I3-220ENST00000505005 KSR2Q6VAB6 950 aa12.58□□□□□ -0.4
NR1I3-220ENST00000505005 TTLL7Q6ZT98 887 aa12.58□□□□□ -0.4
NR1I3-220ENST00000505005 PELP1Q8IZL8 1130 aaKnown RBP12.58□□□□□ -0.4
NR1I3-220ENST00000505005 CCDC191Q8NCU4 936 aa12.58□□□□□ -0.4
NR1I3-220ENST00000505005 NECTIN2Q92692 538 aa12.58□□□□□ -0.4
NR1I3-220ENST00000505005 KLRG2A4D1S0 409 aaPredicted RBP12.57□□□□□ -0.4
NR1I3-220ENST00000505005 EXOSC9Q06265 439 aaKnown RBP12.57□□□□□ -0.4
NR1I3-220ENST00000505005 SLFN5Q08AF3 891 aa12.57□□□□□ -0.4
NR1I3-220ENST00000505005 HLFQ16534 295 aa12.57□□□□□ -0.4
NR1I3-220ENST00000505005 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
NR1I3-220ENST00000505005 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
NR1I3-220ENST00000505005 C2CD5Q86YS7 1000 aa12.57□□□□□ -0.4
NR1I3-220ENST00000505005 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
NR1I3-220ENST00000505005 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
NR1I3-220ENST00000505005 SH3TC1Q8TE82 1336 aa12.57□□□□□ -0.4
NR1I3-220ENST00000505005 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
NR1I3-220ENST00000505005 A0A0G2JLW4 131 aa12.56□□□□□ -0.4
NR1I3-220ENST00000505005 DPEP1P16444 411 aa12.56□□□□□ -0.4
NR1I3-220ENST00000505005 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
NR1I3-220ENST00000505005 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
NR1I3-220ENST00000505005 TRMT112Q9UI30 125 aaKnown RBP12.56□□□□□ -0.4
NR1I3-220ENST00000505005 HDAC5Q9UQL6 1122 aa12.56□□□□□ -0.4
NR1I3-220ENST00000505005 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms