RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 PTPRKQ15262 1439 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 NCOA1Q15788 1441 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 ANKRD30AQ9BXX3 1397 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 FIGNL2A6NMB9 653 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 FAM196BA6NMK8 535 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 INHAP05111 366 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 CLN3Q13286 438 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 CRTC2Q53ET0 693 aaPredicted RBP8.89□□□□□ -0.99
COL4A5-207ENST00000504541 SLC27A3Q5K4L6 730 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.89□□□□□ -0.99
COL4A5-207ENST00000504541 FAM200AQ8TCP9 573 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 IRF7Q92985 503 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 XAGE2Q96GT9 111 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 ESYT1Q9BSJ8 1104 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 ETNK1Q9HBU6 452 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 NEO1Q92859 1461 aa8.89□□□□□ -0.99
COL4A5-207ENST00000504541 ARHGEF5Q12774 1597 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 TTLL8A6PVC2 850 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L15C9J2P7 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L10C9JJH3 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L13C9JLJ4 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L12C9JPN9 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L11C9JVI0 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L21D6R901 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L18D6R9N7 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L22D6RA61 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L17D6RBQ6 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L19D6RCP7 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L20D6RJB6 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 CTSOP43234 321 aaPredicted RBP8.88□□□□□ -0.99
COL4A5-207ENST00000504541 SEC13P55735 322 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 CENPCQ03188 943 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 USP17L24Q0WX57 530 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 DPYDQ12882 1025 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 PTK7Q13308 1070 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 ANKMY2Q8IV38 441 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 HINFPQ9BQA5 517 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 FANCAO15360 1455 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 ADGRL2O95490 1459 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 SHANK2Q9UPX8 1470 aa8.88□□□□□ -0.99
COL4A5-207ENST00000504541 ARHGAP5Q13017 1502 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 SFI1A8K8P3 1242 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 MAN1A2O60476 641 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 IL2RAP01589 272 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 GSK3AP49840 483 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 SRPK2P78362 688 aaKnown RBP8.87□□□□□ -0.99
COL4A5-207ENST00000504541 HOMEZQ8IX15 550 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 NOVA2Q9UNW9 492 aaKnown RBP8.87□□□□□ -0.99
COL4A5-207ENST00000504541 KIAA1024Q9UPX6 916 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 NAIPQ13075 1403 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 PREX2Q70Z35 1606 aa8.87□□□□□ -0.99
COL4A5-207ENST00000504541 CDC42BPAQ5VT25 1732 aa8.86□□□□□ -0.99
COL4A5-207ENST00000504541 CCDC141Q6ZP82 1450 aa8.86□□□□□ -0.99
COL4A5-207ENST00000504541 TMEM229AB2RXF0 380 aa8.86□□□□□ -0.99
COL4A5-207ENST00000504541 ATG7O95352 703 aa8.86□□□□□ -0.99
COL4A5-207ENST00000504541 SCNN1DP51172 638 aa8.86□□□□□ -0.99
COL4A5-207ENST00000504541 KCNMA1Q12791 1236 aa8.86□□□□□ -0.99
COL4A5-207ENST00000504541 ZNF358Q9NW07 568 aa8.86□□□□□ -0.99
COL4A5-207ENST00000504541 TTC37Q6PGP7 1564 aa8.86□□□□□ -0.99
COL4A5-207ENST00000504541 DNMT1P26358 1616 aaKnown RBP8.85□□□□□ -0.99
COL4A5-207ENST00000504541 CSB-PGBD3P0DP91 1061 aa8.85□□□□□ -0.99
COL4A5-207ENST00000504541 RNF144AP50876 292 aaPredicted RBP8.85□□□□□ -0.99
COL4A5-207ENST00000504541 SMTNP53814 917 aa8.85□□□□□ -0.99
COL4A5-207ENST00000504541 TLR1Q15399 786 aa8.85□□□□□ -0.99
COL4A5-207ENST00000504541 TMEM214Q6NUQ4 689 aaKnown RBP8.85□□□□□ -0.99
COL4A5-207ENST00000504541 PRICKLE2Q7Z3G6 844 aa8.85□□□□□ -0.99
COL4A5-207ENST00000504541 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
COL4A5-207ENST00000504541 SIX5Q8N196 739 aa8.85□□□□□ -0.99
COL4A5-207ENST00000504541 ZSCAN10Q96SZ4 725 aaPredicted RBP8.85□□□□□ -0.99
COL4A5-207ENST00000504541 SCAPERQ9BY12 1400 aa8.85□□□□□ -0.99
COL4A5-207ENST00000504541 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
COL4A5-207ENST00000504541 GPC1P35052 558 aa8.84□□□□□ -0.99
COL4A5-207ENST00000504541 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
COL4A5-207ENST00000504541 MYO5CQ9NQX4 1742 aa8.84□□□□□ -0.99
COL4A5-207ENST00000504541 RRP7BPQ9NSQ0 103 aa8.84□□□□□ -0.99
COL4A5-207ENST00000504541 CDC42BPBQ9Y5S2 1711 aa8.84□□□□□ -0.99
COL4A5-207ENST00000504541 TEX14Q8IWB6 1497 aa8.83□□□□□ -1
COL4A5-207ENST00000504541 SPAG9O60271 1321 aaKnown RBP8.83□□□□□ -1
COL4A5-207ENST00000504541 SOS2Q07890 1332 aaPredicted RBP8.83□□□□□ -1
COL4A5-207ENST00000504541 ERBB4Q15303 1308 aa8.83□□□□□ -1
COL4A5-207ENST00000504541 SAMD9LQ8IVG5 1584 aa8.83□□□□□ -1
COL4A5-207ENST00000504541 C9orf84Q5VXU9 1444 aa8.83□□□□□ -1
COL4A5-207ENST00000504541 WASLO00401 505 aaPredicted RBP8.83□□□□□ -1
COL4A5-207ENST00000504541 LYSMD3Q7Z3D4 306 aa8.83□□□□□ -1
COL4A5-207ENST00000504541 TNS4Q8IZW8 715 aa8.83□□□□□ -1
COL4A5-207ENST00000504541 AFAP1Q8N556 730 aa8.83□□□□□ -1
COL4A5-207ENST00000504541 MAST1Q9Y2H9 1570 aa8.82□□□□□ -1
COL4A5-207ENST00000504541 ARHGEF12Q9NZN5 1544 aa8.82□□□□□ -1
COL4A5-207ENST00000504541 A6NJY4 79 aa8.82□□□□□ -1
COL4A5-207ENST00000504541 H3BM21 787 aa8.82□□□□□ -1
COL4A5-207ENST00000504541 ELOAQ14241 798 aaKnown RBP8.82□□□□□ -1
COL4A5-207ENST00000504541 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.82□□□□□ -1
COL4A5-207ENST00000504541 GNASQ5JWF2 1037 aa8.82□□□□□ -1
COL4A5-207ENST00000504541 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
COL4A5-207ENST00000504541 ADGRL1O94910 1474 aa8.82□□□□□ -1
COL4A5-207ENST00000504541 CFAP74Q9C0B2 1584 aa8.82□□□□□ -1
COL4A5-207ENST00000504541 TRAPPC8Q9Y2L5 1435 aa8.81□□□□□ -1
COL4A5-207ENST00000504541 ABCC1P33527 1531 aa8.81□□□□□ -1
COL4A5-207ENST00000504541 FOXD4L5Q5VV16 416 aaPredicted RBP8.81□□□□□ -1
COL4A5-207ENST00000504541 TSEN2Q8NCE0 465 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms