RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 NBPF15Q8N660 670 aa16.33■□□□□ 0.2
PDGFRA-204ENST00000504461 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
PDGFRA-204ENST00000504461 RIPK4P57078 832 aa16.32■□□□□ 0.2
PDGFRA-204ENST00000504461 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
PDGFRA-204ENST00000504461 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
PDGFRA-204ENST00000504461 ARFGEF2Q9Y6D5 1785 aa16.32■□□□□ 0.2
PDGFRA-204ENST00000504461 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
PDGFRA-204ENST00000504461 KDM2BQ8NHM5 1336 aa16.31■□□□□ 0.2
PDGFRA-204ENST00000504461 EIF4A1P60842 406 aaKnown RBP16.31■□□□□ 0.2
PDGFRA-204ENST00000504461 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
PDGFRA-204ENST00000504461 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 RASSF7Q02833 373 aa16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 C16orf71Q8IYS4 520 aaPredicted RBP16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 NMRK2Q9NPI5 230 aa16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 SLX4Q8IY92 1834 aa16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 TIAM2Q8IVF5 1701 aa16.3■□□□□ 0.2
PDGFRA-204ENST00000504461 RGL2O15211 777 aa16.29■□□□□ 0.2
PDGFRA-204ENST00000504461 TOMM70O94826 608 aa16.29■□□□□ 0.2
PDGFRA-204ENST00000504461 LMNB1P20700 586 aa16.29■□□□□ 0.2
PDGFRA-204ENST00000504461 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
PDGFRA-204ENST00000504461 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
PDGFRA-204ENST00000504461 TPTE2Q6XPS3 522 aa16.29■□□□□ 0.2
PDGFRA-204ENST00000504461 CNKSR1Q969H4 720 aa16.29■□□□□ 0.2
PDGFRA-204ENST00000504461 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
PDGFRA-204ENST00000504461 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
PDGFRA-204ENST00000504461 C21orf2O43822 256 aa16.28■□□□□ 0.2
PDGFRA-204ENST00000504461 MYL6BP14649 208 aa16.28■□□□□ 0.2
PDGFRA-204ENST00000504461 HSPA6P17066 643 aa16.28■□□□□ 0.2
PDGFRA-204ENST00000504461 GTF2E1P29083 439 aaPredicted RBP16.28■□□□□ 0.2
PDGFRA-204ENST00000504461 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
PDGFRA-204ENST00000504461 STYK1Q6J9G0 422 aa16.28■□□□□ 0.2
PDGFRA-204ENST00000504461 MASTLQ96GX5 879 aa16.28■□□□□ 0.2
PDGFRA-204ENST00000504461 SRGNP10124 158 aa16.27■□□□□ 0.2
PDGFRA-204ENST00000504461 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
PDGFRA-204ENST00000504461 HLFQ16534 295 aa16.27■□□□□ 0.2
PDGFRA-204ENST00000504461 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.2
PDGFRA-204ENST00000504461 KIF6Q6ZMV9 814 aa16.27■□□□□ 0.2
PDGFRA-204ENST00000504461 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.2
PDGFRA-204ENST00000504461 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
PDGFRA-204ENST00000504461 ZC3H4Q9UPT8 1303 aaKnown RBP16.25■□□□□ 0.19
PDGFRA-204ENST00000504461 ERVV-1B6SEH8 477 aa16.25■□□□□ 0.19
PDGFRA-204ENST00000504461 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
PDGFRA-204ENST00000504461 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
PDGFRA-204ENST00000504461 MAP3K15Q6ZN16 1313 aa16.24■□□□□ 0.19
PDGFRA-204ENST00000504461 NFKBIEO00221 500 aa16.24■□□□□ 0.19
PDGFRA-204ENST00000504461 NPR1P16066 1061 aa16.24■□□□□ 0.19
PDGFRA-204ENST00000504461 EIF2S2P20042 333 aaKnown RBP16.24■□□□□ 0.19
PDGFRA-204ENST00000504461 SOGA3Q5TF21 947 aa16.24■□□□□ 0.19
PDGFRA-204ENST00000504461 PRPF40BQ6NWY9 871 aaKnown RBP16.24■□□□□ 0.19
PDGFRA-204ENST00000504461 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
PDGFRA-204ENST00000504461 ERBB4Q15303 1308 aa16.23■□□□□ 0.19
PDGFRA-204ENST00000504461 TTLL7Q6ZT98 887 aa16.23■□□□□ 0.19
PDGFRA-204ENST00000504461 ZBTB3Q9H5J0 574 aa16.23■□□□□ 0.19
PDGFRA-204ENST00000504461 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
PDGFRA-204ENST00000504461 GLTPD2A6NH11 291 aa16.22■□□□□ 0.19
PDGFRA-204ENST00000504461 PRELPP51888 382 aa16.22■□□□□ 0.19
PDGFRA-204ENST00000504461 DPY19L2Q6NUT2 758 aa16.22■□□□□ 0.19
PDGFRA-204ENST00000504461 RBM46Q8TBY0 533 aaKnown RBP16.22■□□□□ 0.19
PDGFRA-204ENST00000504461 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
PDGFRA-204ENST00000504461 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
PDGFRA-204ENST00000504461 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
PDGFRA-204ENST00000504461 TAOK3Q9H2K8 898 aa16.21■□□□□ 0.19
PDGFRA-204ENST00000504461 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.18
PDGFRA-204ENST00000504461 KLRG2A4D1S0 409 aaPredicted RBP16.2■□□□□ 0.18
PDGFRA-204ENST00000504461 GPTP24298 496 aa16.2■□□□□ 0.18
PDGFRA-204ENST00000504461 APLP1P51693 650 aa16.2■□□□□ 0.18
PDGFRA-204ENST00000504461 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
PDGFRA-204ENST00000504461 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
PDGFRA-204ENST00000504461 CCER2I3L3R5 266 aa16.19■□□□□ 0.18
PDGFRA-204ENST00000504461 VEGFAP15692 232 aaPredicted RBP16.19■□□□□ 0.18
PDGFRA-204ENST00000504461 CCDC93Q567U6 631 aa16.19■□□□□ 0.18
PDGFRA-204ENST00000504461 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
PDGFRA-204ENST00000504461 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
PDGFRA-204ENST00000504461 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
PDGFRA-204ENST00000504461 FSTL1Q12841 308 aa16.18■□□□□ 0.18
PDGFRA-204ENST00000504461 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
PDGFRA-204ENST00000504461 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
PDGFRA-204ENST00000504461 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
PDGFRA-204ENST00000504461 CHL1O00533 1208 aa16.17■□□□□ 0.18
PDGFRA-204ENST00000504461 PDIA6Q15084 440 aa16.17■□□□□ 0.18
PDGFRA-204ENST00000504461 SUSD4Q5VX71 490 aa16.17■□□□□ 0.18
PDGFRA-204ENST00000504461 ZNF34Q8IZ26 560 aa16.17■□□□□ 0.18
PDGFRA-204ENST00000504461 RPGRQ92834 1020 aaKnown RBP16.17■□□□□ 0.18
PDGFRA-204ENST00000504461 ANXA1P04083 346 aa16.16■□□□□ 0.18
PDGFRA-204ENST00000504461 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
PDGFRA-204ENST00000504461 RTKN2Q8IZC4 609 aa16.16■□□□□ 0.18
PDGFRA-204ENST00000504461 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
PDGFRA-204ENST00000504461 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
PDGFRA-204ENST00000504461 UBN2Q6ZU65 1347 aa16.16■□□□□ 0.18
PDGFRA-204ENST00000504461 IBTKQ9P2D0 1353 aaPredicted RBP16.15■□□□□ 0.18
PDGFRA-204ENST00000504461 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
PDGFRA-204ENST00000504461 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
PDGFRA-204ENST00000504461 COPS6Q7L5N1 327 aa16.15■□□□□ 0.18
PDGFRA-204ENST00000504461 ABCC12Q96J65 1359 aa16.14■□□□□ 0.17
PDGFRA-204ENST00000504461 LAMB2P55268 1798 aa16.14■□□□□ 0.17
PDGFRA-204ENST00000504461 FKBP4Q02790 459 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDGFRA-204ENST00000504461 HSP90AB3PQ58FF7 597 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms