RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 USP42Q9H9J4 1324 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-212ENST00000504380 ZPR1O75312 459 aa17.01■□□□□ 0.31
PDLIM7-212ENST00000504380 RARSP54136 660 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-212ENST00000504380 HLFQ16534 295 aa17.01■□□□□ 0.31
PDLIM7-212ENST00000504380 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-212ENST00000504380 NARFQ9UHQ1 456 aa17.01■□□□□ 0.31
PDLIM7-212ENST00000504380 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-212ENST00000504380 BCAR3O75815 825 aa17■□□□□ 0.31
PDLIM7-212ENST00000504380 GYS1P13807 737 aa17■□□□□ 0.31
PDLIM7-212ENST00000504380 FKBP8Q14318 412 aa17■□□□□ 0.31
PDLIM7-212ENST00000504380 KIF6Q6ZMV9 814 aa17■□□□□ 0.31
PDLIM7-212ENST00000504380 CHMP4AQ9BY43 222 aa17■□□□□ 0.31
PDLIM7-212ENST00000504380 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
PDLIM7-212ENST00000504380 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-212ENST00000504380 MAP3K15Q6ZN16 1313 aa16.98■□□□□ 0.31
PDLIM7-212ENST00000504380 FLIIQ13045 1269 aa16.98■□□□□ 0.31
PDLIM7-212ENST00000504380 BICDL1Q6ZP65 573 aa16.98■□□□□ 0.31
PDLIM7-212ENST00000504380 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
PDLIM7-212ENST00000504380 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
PDLIM7-212ENST00000504380 TBC1D9BQ66K14 1250 aa16.97■□□□□ 0.31
PDLIM7-212ENST00000504380 ANKRD13DQ6ZTN6 518 aa16.97■□□□□ 0.31
PDLIM7-212ENST00000504380 BCORQ6W2J9 1755 aa16.97■□□□□ 0.31
PDLIM7-212ENST00000504380 FKBP5Q13451 457 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-212ENST00000504380 RIC3Q7Z5B4 369 aa16.96■□□□□ 0.31
PDLIM7-212ENST00000504380 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
PDLIM7-212ENST00000504380 SCN7AQ01118 1682 aa16.96■□□□□ 0.31
PDLIM7-212ENST00000504380 PI4KAP2A4QPH2 592 aa16.95■□□□□ 0.3
PDLIM7-212ENST00000504380 F6X3S4 739 aa16.95■□□□□ 0.3
PDLIM7-212ENST00000504380 PI4KAP1Q8N8J0 262 aa16.95■□□□□ 0.3
PDLIM7-212ENST00000504380 SLC16A10Q8TF71 515 aa16.95■□□□□ 0.3
PDLIM7-212ENST00000504380 NOB1Q9ULX3 412 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-212ENST00000504380 MAP3K2Q9Y2U5 619 aa16.95■□□□□ 0.3
PDLIM7-212ENST00000504380 CACNA1FO60840 1977 aa16.95■□□□□ 0.3
PDLIM7-212ENST00000504380 NUP98P52948 1817 aa16.94■□□□□ 0.3
PDLIM7-212ENST00000504380 ADCY9O60503 1353 aa16.94■□□□□ 0.3
PDLIM7-212ENST00000504380 ERVV-1B6SEH8 477 aa16.94■□□□□ 0.3
PDLIM7-212ENST00000504380 GPTP24298 496 aa16.94■□□□□ 0.3
PDLIM7-212ENST00000504380 NFIXQ14938 502 aa16.94■□□□□ 0.3
PDLIM7-212ENST00000504380 GIGYF2Q6Y7W6 1299 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-212ENST00000504380 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
PDLIM7-212ENST00000504380 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
PDLIM7-212ENST00000504380 FAM177BA6PVY3 158 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 DDX58O95786 925 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 MMP10P09238 476 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 TM4SF1P30408 202 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 DDR1Q08345 913 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 MYD88Q99836 296 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 TNNQ9UQP3 1299 aa16.93■□□□□ 0.3
PDLIM7-212ENST00000504380 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
PDLIM7-212ENST00000504380 NIP7Q9Y221 180 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDLIM7-212ENST00000504380 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
PDLIM7-212ENST00000504380 TCIRG1Q13488 830 aa16.91■□□□□ 0.3
PDLIM7-212ENST00000504380 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
PDLIM7-212ENST00000504380 PTGER2P43116 358 aa16.9■□□□□ 0.3
PDLIM7-212ENST00000504380 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-212ENST00000504380 ZNF34Q8IZ26 560 aa16.9■□□□□ 0.3
PDLIM7-212ENST00000504380 CCDC24Q8N4L8 307 aa16.9■□□□□ 0.3
PDLIM7-212ENST00000504380 DNAAF4Q8WXU2 420 aa16.9■□□□□ 0.3
PDLIM7-212ENST00000504380 SETDB2Q96T68 719 aa16.9■□□□□ 0.3
PDLIM7-212ENST00000504380 METTL22Q9BUU2 404 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-212ENST00000504380 UBN2Q6ZU65 1347 aa16.9■□□□□ 0.3
PDLIM7-212ENST00000504380 POLRMTO00411 1230 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-212ENST00000504380 SUSD4Q5VX71 490 aa16.89■□□□□ 0.29
PDLIM7-212ENST00000504380 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
PDLIM7-212ENST00000504380 SGIP1Q9BQI5 828 aa16.89■□□□□ 0.29
PDLIM7-212ENST00000504380 PLIN1O60240 522 aa16.88■□□□□ 0.29
PDLIM7-212ENST00000504380 SERPINB2P05120 415 aa16.88■□□□□ 0.29
PDLIM7-212ENST00000504380 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
PDLIM7-212ENST00000504380 CWF19L2Q2TBE0 894 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-212ENST00000504380 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-212ENST00000504380 ISCA1Q9BUE6 129 aa16.88■□□□□ 0.29
PDLIM7-212ENST00000504380 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
PDLIM7-212ENST00000504380 PTPRCP08575 1304 aa16.88■□□□□ 0.29
PDLIM7-212ENST00000504380 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
PDLIM7-212ENST00000504380 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
PDLIM7-212ENST00000504380 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
PDLIM7-212ENST00000504380 POLD1P28340 1107 aa16.87■□□□□ 0.29
PDLIM7-212ENST00000504380 HSP90AB3PQ58FF7 597 aa16.87■□□□□ 0.29
PDLIM7-212ENST00000504380 NLRP10Q86W26 655 aa16.87■□□□□ 0.29
PDLIM7-212ENST00000504380 CLUAP1Q96AJ1 413 aa16.87■□□□□ 0.29
PDLIM7-212ENST00000504380 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
PDLIM7-212ENST00000504380 RGL2O15211 777 aa16.86■□□□□ 0.29
PDLIM7-212ENST00000504380 SYNE4Q8N205 404 aa16.86■□□□□ 0.29
PDLIM7-212ENST00000504380 AFDNP55196 1824 aaKnown RBP16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 TRIM27P14373 513 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 NEXNQ0ZGT2 675 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 RTL5Q5HYW3 569 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 BEND3Q5T5X7 828 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 ATF7IPQ6VMQ6 1270 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 NBPF5PQ86XG9 351 aaPredicted RBP16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 NUTM1Q86Y26 1132 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 SYT17Q9BSW7 474 aa16.85■□□□□ 0.29
PDLIM7-212ENST00000504380 API5Q9BZZ5 524 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms