RNA–Protein interactions for RNA: ENST00000504246.5

LINC00461-203, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 2,300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-203ENST00000504246 NCAPD2Q15021 1401 aa22.27■■□□□ 1.16
LINC00461-203ENST00000504246 KCNQ3O43525 872 aa22.27■■□□□ 1.16
LINC00461-203ENST00000504246 RUFY3Q7L099 469 aa22.27■■□□□ 1.16
LINC00461-203ENST00000504246 ATP6V1DQ9Y5K8 247 aa22.27■■□□□ 1.16
LINC00461-203ENST00000504246 AMOTQ4VCS5 1084 aa22.26■■□□□ 1.15
LINC00461-203ENST00000504246 SMC3Q9UQE7 1217 aa22.26■■□□□ 1.15
LINC00461-203ENST00000504246 PHRF1Q9P1Y6 1649 aaKnown RBP22.26■■□□□ 1.15
LINC00461-203ENST00000504246 STX6O43752 255 aa22.26■■□□□ 1.15
LINC00461-203ENST00000504246 CSPP1Q1MSJ5 1256 aa22.26■■□□□ 1.15
LINC00461-203ENST00000504246 ECHDC1Q9NTX5 307 aa22.26■■□□□ 1.15
LINC00461-203ENST00000504246 SPG7Q9UQ90 795 aa22.26■■□□□ 1.15
LINC00461-203ENST00000504246 OVOS2A0A0G2JMS6 1433 aa22.26■■□□□ 1.15
LINC00461-203ENST00000504246 CCDC183Q5T5S1 534 aa22.25■■□□□ 1.15
LINC00461-203ENST00000504246 C9orf78Q9NZ63 289 aaPredicted RBP22.25■■□□□ 1.15
LINC00461-203ENST00000504246 LETM1O95202 739 aaPredicted RBP22.25■■□□□ 1.15
LINC00461-203ENST00000504246 ANXA1P04083 346 aa22.24■■□□□ 1.15
LINC00461-203ENST00000504246 CASTP20810 708 aaKnown RBP22.24■■□□□ 1.15
LINC00461-203ENST00000504246 SYT1P21579 422 aa22.24■■□□□ 1.15
LINC00461-203ENST00000504246 GLIPR1L2Q4G1C9 344 aa22.24■■□□□ 1.15
LINC00461-203ENST00000504246 UVSSAQ2YD98 709 aa22.24■■□□□ 1.15
LINC00461-203ENST00000504246 MAP3K2Q9Y2U5 619 aa22.24■■□□□ 1.15
LINC00461-203ENST00000504246 IFIT2P09913 472 aaKnown RBP22.23■■□□□ 1.15
LINC00461-203ENST00000504246 UBE2HP62256 183 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 MPRIPQ6WCQ1 1025 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 TM6SF1Q9BZW5 370 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 CNPY2Q9Y2B0 182 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 F13A1P00488 732 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 C1orf141Q5JVX7 400 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 KSR2Q6VAB6 950 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 ZSCAN31Q96LW9 406 aaPredicted RBP22.23■■□□□ 1.15
LINC00461-203ENST00000504246 HYPKQ9NX55 129 aa22.23■■□□□ 1.15
LINC00461-203ENST00000504246 RNMTO43148 476 aaKnown RBP22.22■■□□□ 1.15
LINC00461-203ENST00000504246 PSME1Q06323 249 aa22.22■■□□□ 1.15
LINC00461-203ENST00000504246 KLHL34Q8N239 644 aa22.22■■□□□ 1.15
LINC00461-203ENST00000504246 EVI5LQ96CN4 794 aa22.22■■□□□ 1.15
LINC00461-203ENST00000504246 SH2B1Q9NRF2 756 aaPredicted RBP22.22■■□□□ 1.15
LINC00461-203ENST00000504246 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
LINC00461-203ENST00000504246 ZBTB7CA1YPR0 619 aa22.22■■□□□ 1.15
LINC00461-203ENST00000504246 XPCQ01831 940 aaPredicted RBP22.22■■□□□ 1.15
LINC00461-203ENST00000504246 KCNB2Q92953 911 aa22.22■■□□□ 1.15
LINC00461-203ENST00000504246 PTMAP06454 111 aaKnown RBP22.21■■□□□ 1.15
LINC00461-203ENST00000504246 PDRG1Q9NUG6 133 aa22.21■■□□□ 1.15
LINC00461-203ENST00000504246 LRRC59Q96AG4 307 aaKnown RBP22.2■■□□□ 1.15
LINC00461-203ENST00000504246 JAKMIP1Q96N16 626 aaKnown RBP22.2■■□□□ 1.15
LINC00461-203ENST00000504246 CYP46A1Q9Y6A2 500 aa22.2■■□□□ 1.15
LINC00461-203ENST00000504246 GIGYF1O75420 1035 aaPredicted RBP22.2■■□□□ 1.14
LINC00461-203ENST00000504246 ZSWIM6Q9HCJ5 1215 aa22.2■■□□□ 1.14
LINC00461-203ENST00000504246 HIP1O00291 1037 aa22.19■■□□□ 1.14
LINC00461-203ENST00000504246 PTH1RQ03431 593 aa22.19■■□□□ 1.14
LINC00461-203ENST00000504246 PRPF40BQ6NWY9 871 aaKnown RBP22.19■■□□□ 1.14
LINC00461-203ENST00000504246 R3HCC1Q9Y3T6 440 aaKnown RBP22.19■■□□□ 1.14
LINC00461-203ENST00000504246 HEG1Q9ULI3 1381 aa22.19■■□□□ 1.14
LINC00461-203ENST00000504246 LARP6Q9BRS8 491 aaKnown RBP22.19■■□□□ 1.14
LINC00461-203ENST00000504246 SETD1BQ9UPS6 1966 aaKnown RBP22.18■■□□□ 1.14
LINC00461-203ENST00000504246 ZKSCAN1P17029 563 aaPredicted RBP22.18■■□□□ 1.14
LINC00461-203ENST00000504246 AACSQ86V21 672 aa22.18■■□□□ 1.14
LINC00461-203ENST00000504246 ANKLE2Q86XL3 938 aa22.18■■□□□ 1.14
LINC00461-203ENST00000504246 PXDNQ92626 1479 aa22.18■■□□□ 1.14
LINC00461-203ENST00000504246 CCDC171Q6TFL3 1326 aa22.18■■□□□ 1.14
LINC00461-203ENST00000504246 CCDC83Q8IWF9 413 aa22.18■■□□□ 1.14
LINC00461-203ENST00000504246 LARGE1O95461 756 aa22.17■■□□□ 1.14
LINC00461-203ENST00000504246 CPA1P15085 419 aa22.17■■□□□ 1.14
LINC00461-203ENST00000504246 GJB2P29033 226 aa22.17■■□□□ 1.14
LINC00461-203ENST00000504246 ESCO1Q5FWF5 840 aa22.17■■□□□ 1.14
LINC00461-203ENST00000504246 LINS1Q8NG48 757 aa22.17■■□□□ 1.14
LINC00461-203ENST00000504246 PA2G4Q9UQ80 394 aaKnown RBP22.17■■□□□ 1.14
LINC00461-203ENST00000504246 DDX58O95786 925 aaKnown RBP22.17■■□□□ 1.14
LINC00461-203ENST00000504246 NECTIN1Q15223 517 aa22.17■■□□□ 1.14
LINC00461-203ENST00000504246 PROSER3Q2NL68 480 aa22.17■■□□□ 1.14
LINC00461-203ENST00000504246 GRM8O00222 908 aa22.16■■□□□ 1.14
LINC00461-203ENST00000504246 CWF19L2Q2TBE0 894 aaKnown RBP22.16■■□□□ 1.14
LINC00461-203ENST00000504246 ADCK5Q3MIX3 580 aa22.16■■□□□ 1.14
LINC00461-203ENST00000504246 UTYO14607 1347 aa22.16■■□□□ 1.14
LINC00461-203ENST00000504246 ZNF142P52746 1687 aaPredicted RBP22.16■■□□□ 1.14
LINC00461-203ENST00000504246 FIBPO43427 364 aa22.15■■□□□ 1.14
LINC00461-203ENST00000504246 PDIA4P13667 645 aaKnown RBP22.15■■□□□ 1.14
LINC00461-203ENST00000504246 TCHHQ07283 1943 aa22.15■■□□□ 1.14
LINC00461-203ENST00000504246 MTMR6Q9Y217 621 aa22.15■■□□□ 1.14
LINC00461-203ENST00000504246 KIAA2012Q0VF49 1180 aa22.14■■□□□ 1.14
LINC00461-203ENST00000504246 G3BP1Q13283 466 aaKnown RBP eCLIP22.14■■□□□ 1.14
LINC00461-203ENST00000504246 RBM33Q96EV2 1170 aaKnown RBP22.14■■□□□ 1.14
LINC00461-203ENST00000504246 SLIT3O75094 1523 aa22.14■■□□□ 1.13
LINC00461-203ENST00000504246 ARHGEF25Q86VW2 580 aa22.14■■□□□ 1.13
LINC00461-203ENST00000504246 PDCL3Q9H2J4 239 aa22.14■■□□□ 1.13
LINC00461-203ENST00000504246 RBM8AQ9Y5S9 174 aaKnown RBP22.14■■□□□ 1.13
LINC00461-203ENST00000504246 PSMA5P28066 241 aa22.13■■□□□ 1.13
LINC00461-203ENST00000504246 KCNJ4P48050 445 aa22.13■■□□□ 1.13
LINC00461-203ENST00000504246 SUCLG2Q96I99 432 aa22.13■■□□□ 1.13
LINC00461-203ENST00000504246 LMTK3Q96Q04 1460 aa22.13■■□□□ 1.13
LINC00461-203ENST00000504246 GCP02774 474 aa22.13■■□□□ 1.13
LINC00461-203ENST00000504246 CREB3L3Q68CJ9 461 aa22.13■■□□□ 1.13
LINC00461-203ENST00000504246 DDX21Q9NR30 783 aaKnown RBP eCLIP22.13■■□□□ 1.13
LINC00461-203ENST00000504246 SNRKQ9NRH2 765 aa22.13■■□□□ 1.13
LINC00461-203ENST00000504246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.13■■□□□ 1.13
LINC00461-203ENST00000504246 MAP4K1Q92918 833 aa22.12■■□□□ 1.13
LINC00461-203ENST00000504246 SASH1O94885 1247 aa22.12■■□□□ 1.13
LINC00461-203ENST00000504246 ANKRD24Q8TF21 1146 aa22.12■■□□□ 1.13
LINC00461-203ENST00000504246 USP25Q9UHP3 1055 aa22.12■■□□□ 1.13
LINC00461-203ENST00000504246 CAMTA1Q9Y6Y1 1673 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms