RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 TRERF1Q96PN7 1200 aa8.61□□□□□ -1.03
TRAPPC13-205ENST00000504243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■■■■■ 149.1
TRAPPC13-205ENST00000504243 GNEQ9Y223 722 aaKnown RBP8.61□□□□□ -1.03
TRAPPC13-205ENST00000504243 MFAP1P55081 439 aaKnown RBP8.6□□□□□ -1.03
TRAPPC13-205ENST00000504243 OCLNQ16625 522 aa8.6□□□□□ -1.03
TRAPPC13-205ENST00000504243 TXNDC2Q86VQ3 553 aa8.6□□□□□ -1.03
TRAPPC13-205ENST00000504243 NEUROD4Q9HD90 331 aa8.6□□□□□ -1.03
TRAPPC13-205ENST00000504243 HCN4Q9Y3Q4 1203 aa8.6□□□□□ -1.03
TRAPPC13-205ENST00000504243 GJA3Q9Y6H8 435 aa8.6□□□□□ -1.03
TRAPPC13-205ENST00000504243 A0A1W2PNR3 127 aa8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 SERPINB4P48594 390 aa8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 SH3PXD2AQ5TCZ1 1133 aa8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 RHPN1Q8TCX5 695 aa8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 GTPBP3Q969Y2 492 aaKnown RBP8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 ZIC5Q96T25 663 aa8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 PHF24Q9UPV7 400 aa8.59□□□□□ -1.03
TRAPPC13-205ENST00000504243 WIPF1O43516 503 aa8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 GMPRP36959 345 aa8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 HIF1AQ16665 826 aa8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 ALDH16A1Q8IZ83 802 aa8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 CFHR5Q9BXR6 569 aa8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 ANKIB1Q9P2G1 1089 aa8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 BIN2Q9UBW5 565 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC13-205ENST00000504243 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-205ENST00000504243 NAA30Q147X3 362 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-205ENST00000504243 CCDC27Q2M243 656 aa8.57□□□□□ -1.04
TRAPPC13-205ENST00000504243 ANO2Q9NQ90 1003 aa8.57□□□□□ -1.04
TRAPPC13-205ENST00000504243 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
TRAPPC13-205ENST00000504243 THBS1P07996 1170 aa8.56□□□□□ -1.04
TRAPPC13-205ENST00000504243 C7orf43Q8WVR3 580 aa8.56□□□□□ -1.04
TRAPPC13-205ENST00000504243 NGLY1Q96IV0 654 aa8.56□□□□□ -1.04
TRAPPC13-205ENST00000504243 COL25A1Q9BXS0 654 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC13-205ENST00000504243 SEPT3Q9UH03 358 aa8.56□□□□□ -1.04
TRAPPC13-205ENST00000504243 PCDHGC4Q9Y5F7 938 aa8.56□□□□□ -1.04
TRAPPC13-205ENST00000504243 ZNF211Q13398 564 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC13-205ENST00000504243 UBAP2LQ14157 1087 aaKnown RBP8.55□□□□□ -1.04
TRAPPC13-205ENST00000504243 RTN1Q16799 776 aa8.55□□□□□ -1.04
TRAPPC13-205ENST00000504243 SAMD5Q5TGI4 173 aa8.55□□□□□ -1.04
TRAPPC13-205ENST00000504243 GTF3C2Q8WUA4 911 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC13-205ENST00000504243 COL26A1Q96A83 441 aa8.55□□□□□ -1.04
TRAPPC13-205ENST00000504243 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
TRAPPC13-205ENST00000504243 ATXN7L1Q9ULK2 861 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC13-205ENST00000504243 GPR25O00155 361 aa8.54□□□□□ -1.04
TRAPPC13-205ENST00000504243 ATXN7O15265 892 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC13-205ENST00000504243 CAPN12Q6ZSI9 719 aa8.54□□□□□ -1.04
TRAPPC13-205ENST00000504243 NSFL1CQ9UNZ2 370 aaKnown RBP8.54□□□□□ -1.04
TRAPPC13-205ENST00000504243 SOWAHDA6NJG2 315 aa8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 H3BRB1 525 aa8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 LRRC69Q6ZNQ3 347 aa8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 GLYCTKQ8IVS8 523 aa8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 CNTNAP3BQ96NU0 1288 aa8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 CNTNAP3Q9BZ76 1288 aa8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 TUT1Q9H6E5 874 aaKnown RBP8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 MBIPQ9NS73 344 aa8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 NDFIP2Q9NV92 336 aa8.53□□□□□ -1.04
TRAPPC13-205ENST00000504243 BNIP3LO60238 219 aa8.52□□□□□ -1.05
TRAPPC13-205ENST00000504243 FAM157BP0CG42 384 aa8.52□□□□□ -1.05
TRAPPC13-205ENST00000504243 MX2P20592 715 aa8.52□□□□□ -1.05
TRAPPC13-205ENST00000504243 INSM1Q01101 510 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC13-205ENST00000504243 MYO19Q96H55 970 aa8.52□□□□□ -1.05
TRAPPC13-205ENST00000504243 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
TRAPPC13-205ENST00000504243 KRT76Q01546 638 aa8.51□□□□□ -1.05
TRAPPC13-205ENST00000504243 GAS6Q14393 721 aa8.51□□□□□ -1.05
TRAPPC13-205ENST00000504243 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
TRAPPC13-205ENST00000504243 KHNYNO15037 678 aaKnown RBP8.5□□□□□ -1.05
TRAPPC13-205ENST00000504243 FGFR3P22607 806 aa8.5□□□□□ -1.05
TRAPPC13-205ENST00000504243 SRSF11Q05519 484 aaKnown RBP8.5□□□□□ -1.05
TRAPPC13-205ENST00000504243 MTMR3Q13615 1198 aa8.5□□□□□ -1.05
TRAPPC13-205ENST00000504243 LAMC2Q13753 1193 aa8.5□□□□□ -1.05
TRAPPC13-205ENST00000504243 ABHD17AQ96GS6 310 aa8.5□□□□□ -1.05
TRAPPC13-205ENST00000504243 QTRT2Q9H974 415 aaKnown RBP8.5□□□□□ -1.05
TRAPPC13-205ENST00000504243 DNMT3AQ9Y6K1 912 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC13-205ENST00000504243 MAPTP10636 758 aaKnown RBP8.49□□□□□ -1.05
TRAPPC13-205ENST00000504243 TNP2Q05952 138 aa8.49□□□□□ -1.05
TRAPPC13-205ENST00000504243 C11orf91Q3C1V1 193 aa8.49□□□□□ -1.05
TRAPPC13-205ENST00000504243 IER5Q5VY09 327 aa8.49□□□□□ -1.05
TRAPPC13-205ENST00000504243 EGFL7Q9UHF1 273 aa8.49□□□□□ -1.05
TRAPPC13-205ENST00000504243 DCDC2BA2VCK2 349 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 TGFBR3LH3BV60 316 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 ICMTO60725 284 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 MAP2K3P46734 347 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 DGKZQ13574 1117 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 AAMPQ13685 434 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 FAM182BQ5T319 152 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 C16orf46Q6P387 395 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 NPM2Q86SE8 214 aaKnown RBP8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 HSH2DQ96JZ2 352 aa8.48□□□□□ -1.05
TRAPPC13-205ENST00000504243 EFSO43281 561 aa8.47□□□□□ -1.05
TRAPPC13-205ENST00000504243 SLURP2P0DP57 97 aa8.47□□□□□ -1.05
TRAPPC13-205ENST00000504243 SF3B2Q13435 895 aaKnown RBP8.47□□□□□ -1.05
TRAPPC13-205ENST00000504243 COX20Q5RI15 118 aa8.47□□□□□ -1.05
TRAPPC13-205ENST00000504243 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
TRAPPC13-205ENST00000504243 CEP63Q96MT8 703 aa8.47□□□□□ -1.05
TRAPPC13-205ENST00000504243 MARK1Q9P0L2 795 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms