RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 TMOD3Q9NYL9 352 aa11.87□□□□□ -0.51
ARHGEF28-206ENST00000504003 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF28-206ENST00000504003 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
ARHGEF28-206ENST00000504003 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
ARHGEF28-206ENST00000504003 ZNF853P0CG23 659 aa11.86□□□□□ -0.51
ARHGEF28-206ENST00000504003 MBIPQ9NS73 344 aa11.86□□□□□ -0.51
ARHGEF28-206ENST00000504003 GLI3P10071 1580 aa11.86□□□□□ -0.51
ARHGEF28-206ENST00000504003 ADAMTS7Q9UKP4 1686 aa11.86□□□□□ -0.51
ARHGEF28-206ENST00000504003 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
ARHGEF28-206ENST00000504003 PSEN2P49810 448 aa11.85□□□□□ -0.51
ARHGEF28-206ENST00000504003 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
ARHGEF28-206ENST00000504003 SEPT12Q8IYM1 358 aa11.85□□□□□ -0.51
ARHGEF28-206ENST00000504003 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF28-206ENST00000504003 NFATC2IPQ8NCF5 419 aa11.85□□□□□ -0.51
ARHGEF28-206ENST00000504003 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
ARHGEF28-206ENST00000504003 OXER1Q8TDS5 423 aa11.84□□□□□ -0.51
ARHGEF28-206ENST00000504003 UPF1Q92900 1129 aaKnown RBP eCLIP11.84□□□□□ -0.51
ARHGEF28-206ENST00000504003 TSR2Q969E8 191 aaKnown RBP11.84□□□□□ -0.51
ARHGEF28-206ENST00000504003 SYTL4Q96C24 671 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF28-206ENST00000504003 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF28-206ENST00000504003 MRC1P22897 1456 aa11.83□□□□□ -0.52
ARHGEF28-206ENST00000504003 SIPA1L3O60292 1781 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF28-206ENST00000504003 HMGB2P26583 209 aaKnown RBP11.83□□□□□ -0.52
ARHGEF28-206ENST00000504003 PDE4AP27815 886 aa11.83□□□□□ -0.52
ARHGEF28-206ENST00000504003 EXOSC9Q06265 439 aaKnown RBP11.83□□□□□ -0.52
ARHGEF28-206ENST00000504003 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
ARHGEF28-206ENST00000504003 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
ARHGEF28-206ENST00000504003 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
ARHGEF28-206ENST00000504003 HOXB7P09629 217 aa11.82□□□□□ -0.52
ARHGEF28-206ENST00000504003 TWISTNBQ3B726 338 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF28-206ENST00000504003 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
ARHGEF28-206ENST00000504003 KRT27Q7Z3Y8 459 aa11.82□□□□□ -0.52
ARHGEF28-206ENST00000504003 MARCH10Q8NA82 808 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF28-206ENST00000504003 FMNL2Q96PY5 1086 aa11.82□□□□□ -0.52
ARHGEF28-206ENST00000504003 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
ARHGEF28-206ENST00000504003 NEFLP07196 543 aa11.81□□□□□ -0.52
ARHGEF28-206ENST00000504003 FAM196AQ6ZSG2 479 aa11.81□□□□□ -0.52
ARHGEF28-206ENST00000504003 SMARCC1Q92922 1105 aaPredicted RBP11.81□□□□□ -0.52
ARHGEF28-206ENST00000504003 MIS18AQ9NYP9 233 aa11.81□□□□□ -0.52
ARHGEF28-206ENST00000504003 KDM3BQ7LBC6 1761 aa11.81□□□□□ -0.52
ARHGEF28-206ENST00000504003 BCL9O00512 1426 aa11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 HRO43593 1189 aa11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 CANXP27824 592 aaKnown RBP11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 ALDH1L2Q3SY69 923 aa11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 ZNF454Q8N9F8 522 aa11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 STK31Q9BXU1 1019 aa11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 TEX13AQ9BXU3 409 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 ITGB4P16144 1822 aa11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 DOT1LQ8TEK3 1739 aa11.8□□□□□ -0.52
ARHGEF28-206ENST00000504003 MS4A1P11836 297 aa11.79□□□□□ -0.52
ARHGEF28-206ENST00000504003 EIF4A1P60842 406 aaKnown RBP11.79□□□□□ -0.52
ARHGEF28-206ENST00000504003 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
ARHGEF28-206ENST00000504003 ELL2O00472 640 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF28-206ENST00000504003 IPO8O15397 1037 aaKnown RBP11.78□□□□□ -0.52
ARHGEF28-206ENST00000504003 SNRPA1P09661 255 aaKnown RBP11.78□□□□□ -0.52
ARHGEF28-206ENST00000504003 ACSBG1Q96GR2 724 aa11.78□□□□□ -0.52
ARHGEF28-206ENST00000504003 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
ARHGEF28-206ENST00000504003 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.52
ARHGEF28-206ENST00000504003 VAMP4O75379 141 aa11.77□□□□□ -0.53
ARHGEF28-206ENST00000504003 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
ARHGEF28-206ENST00000504003 C8orf58Q8NAV2 365 aa11.77□□□□□ -0.53
ARHGEF28-206ENST00000504003 PIGBQ92521 554 aa11.77□□□□□ -0.53
ARHGEF28-206ENST00000504003 SMC4Q9NTJ3 1288 aa11.77□□□□□ -0.53
ARHGEF28-206ENST00000504003 KIF16BQ96L93 1317 aa11.77□□□□□ -0.53
ARHGEF28-206ENST00000504003 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF28-206ENST00000504003 RARSP54136 660 aaKnown RBP11.76□□□□□ -0.53
ARHGEF28-206ENST00000504003 SLC39A6Q13433 755 aa11.76□□□□□ -0.53
ARHGEF28-206ENST00000504003 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
ARHGEF28-206ENST00000504003 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
ARHGEF28-206ENST00000504003 BRWD3Q6RI45 1802 aa11.76□□□□□ -0.53
ARHGEF28-206ENST00000504003 CACNA1FO60840 1977 aa11.76□□□□□ -0.53
ARHGEF28-206ENST00000504003 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
ARHGEF28-206ENST00000504003 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
ARHGEF28-206ENST00000504003 STARD3NLO95772 234 aa11.75□□□□□ -0.53
ARHGEF28-206ENST00000504003 NPM2Q86SE8 214 aaKnown RBP11.75□□□□□ -0.53
ARHGEF28-206ENST00000504003 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
ARHGEF28-206ENST00000504003 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
ARHGEF28-206ENST00000504003 HEG1Q9ULI3 1381 aa11.75□□□□□ -0.53
ARHGEF28-206ENST00000504003 PTCD1O75127 700 aaKnown RBP11.74□□□□□ -0.53
ARHGEF28-206ENST00000504003 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
ARHGEF28-206ENST00000504003 TSPYL6Q8N831 410 aa11.74□□□□□ -0.53
ARHGEF28-206ENST00000504003 KCTD12Q96CX2 325 aaKnown RBP11.74□□□□□ -0.53
ARHGEF28-206ENST00000504003 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF28-206ENST00000504003 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
ARHGEF28-206ENST00000504003 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF28-206ENST00000504003 UBR2Q8IWV8 1755 aa11.74□□□□□ -0.53
ARHGEF28-206ENST00000504003 RGS12O14924 1447 aa11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 KCNQ3O43525 872 aa11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 PTPREP23469 700 aa11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 BRPF1P55201 1214 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 SBF2Q86WG5 1849 aa11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 FRAT1Q92837 279 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
ARHGEF28-206ENST00000504003 PALLDQ8WX93 1383 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 PTPRCP08575 1304 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 FOSBP53539 338 aa11.72□□□□□ -0.53
ARHGEF28-206ENST00000504003 RRP1P56182 461 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms