RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 ERVV-1B6SEH8 477 aa14.31□□□□□ -0.12
VCAN-205ENST00000503923 TTLL7Q6ZT98 887 aa14.31□□□□□ -0.12
VCAN-205ENST00000503923 COPS6Q7L5N1 327 aa14.31□□□□□ -0.12
VCAN-205ENST00000503923 XAGE3Q8WTP9 111 aa14.31□□□□□ -0.12
VCAN-205ENST00000503923 ZNF652Q9Y2D9 606 aa14.31□□□□□ -0.12
VCAN-205ENST00000503923 MAP3K15Q6ZN16 1313 aa14.31□□□□□ -0.12
VCAN-205ENST00000503923 MMP10P09238 476 aa14.3□□□□□ -0.12
VCAN-205ENST00000503923 AIMP1Q12904 312 aaKnown RBP14.3□□□□□ -0.12
VCAN-205ENST00000503923 CLEC4GQ6UXB4 293 aa14.3□□□□□ -0.12
VCAN-205ENST00000503923 CACNA1FO60840 1977 aa14.29□□□□□ -0.12
VCAN-205ENST00000503923 CT47B1P0C2W7 299 aaPredicted RBP14.29□□□□□ -0.12
VCAN-205ENST00000503923 ZNF428Q96B54 188 aa14.29□□□□□ -0.12
VCAN-205ENST00000503923 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
VCAN-205ENST00000503923 TCERG1O14776 1098 aaKnown RBP14.28□□□□□ -0.12
VCAN-205ENST00000503923 SLC4A2P04920 1241 aa14.28□□□□□ -0.12
VCAN-205ENST00000503923 TM4SF1P30408 202 aa14.28□□□□□ -0.12
VCAN-205ENST00000503923 NFIXQ14938 502 aa14.28□□□□□ -0.12
VCAN-205ENST00000503923 HLFQ16534 295 aa14.28□□□□□ -0.12
VCAN-205ENST00000503923 ZBTB3Q9H5J0 574 aa14.28□□□□□ -0.12
VCAN-205ENST00000503923 PHAXQ9H814 394 aaKnown RBP14.28□□□□□ -0.12
VCAN-205ENST00000503923 PARP3Q9Y6F1 533 aa14.28□□□□□ -0.12
VCAN-205ENST00000503923 NUP98P52948 1817 aa14.27□□□□□ -0.12
VCAN-205ENST00000503923 TBC1D9BQ66K14 1250 aa14.27□□□□□ -0.13
VCAN-205ENST00000503923 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
VCAN-205ENST00000503923 BICDL1Q6ZP65 573 aa14.27□□□□□ -0.13
VCAN-205ENST00000503923 ANKRD13DQ6ZTN6 518 aa14.27□□□□□ -0.13
VCAN-205ENST00000503923 PLBD2Q8NHP8 589 aa14.27□□□□□ -0.13
VCAN-205ENST00000503923 POLRMTO00411 1230 aaKnown RBP14.26□□□□□ -0.13
VCAN-205ENST00000503923 DDX58O95786 925 aaKnown RBP14.26□□□□□ -0.13
VCAN-205ENST00000503923 DDR1Q08345 913 aa14.26□□□□□ -0.13
VCAN-205ENST00000503923 HSP90AB3PQ58FF7 597 aa14.26□□□□□ -0.13
VCAN-205ENST00000503923 SETDB2Q96T68 719 aa14.26□□□□□ -0.13
VCAN-205ENST00000503923 ATP10DQ9P241 1426 aa14.25□□□□□ -0.13
VCAN-205ENST00000503923 CARMIL3Q8ND23 1372 aa14.25□□□□□ -0.13
VCAN-205ENST00000503923 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
VCAN-205ENST00000503923 SRCAPQ6ZRS2 3230 aa14.25□□□□□ -0.13
VCAN-205ENST00000503923 SERPINB2P05120 415 aa14.24□□□□□ -0.13
VCAN-205ENST00000503923 FLIIQ13045 1269 aa14.24□□□□□ -0.13
VCAN-205ENST00000503923 ALDH1L2Q3SY69 923 aa14.24□□□□□ -0.13
VCAN-205ENST00000503923 G2E3Q7L622 706 aa14.24□□□□□ -0.13
VCAN-205ENST00000503923 RIC3Q7Z5B4 369 aa14.24□□□□□ -0.13
VCAN-205ENST00000503923 TCIRG1Q13488 830 aa14.23□□□□□ -0.13
VCAN-205ENST00000503923 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
VCAN-205ENST00000503923 SSH1Q8WYL5 1049 aa14.23□□□□□ -0.13
VCAN-205ENST00000503923 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
VCAN-205ENST00000503923 AFDNP55196 1824 aaKnown RBP14.22□□□□□ -0.13
VCAN-205ENST00000503923 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
VCAN-205ENST00000503923 ARFGEF2Q9Y6D5 1785 aa14.22□□□□□ -0.13
VCAN-205ENST00000503923 NRXN2Q9P2S2 1712 aa14.22□□□□□ -0.13
VCAN-205ENST00000503923 FKBP5Q13451 457 aaPredicted RBP14.22□□□□□ -0.13
VCAN-205ENST00000503923 PARP10Q53GL7 1025 aa14.22□□□□□ -0.13
VCAN-205ENST00000503923 KSR2Q6VAB6 950 aa14.22□□□□□ -0.13
VCAN-205ENST00000503923 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
VCAN-205ENST00000503923 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
VCAN-205ENST00000503923 FHDC1Q9C0D6 1143 aaPredicted RBP14.22□□□□□ -0.13
VCAN-205ENST00000503923 CD2APQ9Y5K6 639 aa14.22□□□□□ -0.13
VCAN-205ENST00000503923 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
VCAN-205ENST00000503923 NPHP1O15259 732 aa14.21□□□□□ -0.13
VCAN-205ENST00000503923 GPTP24298 496 aa14.21□□□□□ -0.13
VCAN-205ENST00000503923 NBPF5PQ86XG9 351 aaPredicted RBP14.21□□□□□ -0.13
VCAN-205ENST00000503923 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
VCAN-205ENST00000503923 CNBD1Q8NA66 436 aa14.21□□□□□ -0.13
VCAN-205ENST00000503923 SMC4Q9NTJ3 1288 aa14.21□□□□□ -0.13
VCAN-205ENST00000503923 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.13
VCAN-205ENST00000503923 C10orf71Q711Q0 1435 aa14.21□□□□□ -0.13
VCAN-205ENST00000503923 UBN2Q6ZU65 1347 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 RARSP54136 660 aaKnown RBP14.2□□□□□ -0.14
VCAN-205ENST00000503923 TPTE2Q6XPS3 522 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 PPP1R42Q7Z4L9 355 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 SYT17Q9BSW7 474 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 ISCA1Q9BUE6 129 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 METTL22Q9BUU2 404 aaPredicted RBP14.2□□□□□ -0.14
VCAN-205ENST00000503923 BCL2L13Q9BXK5 485 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 NYXQ9GZU5 481 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 ADCY9O60503 1353 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 IBTKQ9P2D0 1353 aaPredicted RBP14.2□□□□□ -0.14
VCAN-205ENST00000503923 KIF13BQ9NQT8 1826 aa14.2□□□□□ -0.14
VCAN-205ENST00000503923 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
VCAN-205ENST00000503923 BRPF1P55201 1214 aaPredicted RBP14.19□□□□□ -0.14
VCAN-205ENST00000503923 ST5P78524 1137 aa14.19□□□□□ -0.14
VCAN-205ENST00000503923 SUSD4Q5VX71 490 aa14.19□□□□□ -0.14
VCAN-205ENST00000503923 PRR5LQ6MZQ0 368 aa14.19□□□□□ -0.14
VCAN-205ENST00000503923 MYD88Q99836 296 aa14.19□□□□□ -0.14
VCAN-205ENST00000503923 PTPRCP08575 1304 aa14.18□□□□□ -0.14
VCAN-205ENST00000503923 ATP5J2-PTCD1G3V325 749 aa14.18□□□□□ -0.14
VCAN-205ENST00000503923 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
VCAN-205ENST00000503923 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
VCAN-205ENST00000503923 TRIM28Q13263 835 aaKnown RBP14.18□□□□□ -0.14
VCAN-205ENST00000503923 NLRP10Q86W26 655 aa14.18□□□□□ -0.14
VCAN-205ENST00000503923 DNAAF4Q8WXU2 420 aa14.18□□□□□ -0.14
VCAN-205ENST00000503923 UTP14AQ9BVJ6 771 aaKnown RBP14.18□□□□□ -0.14
VCAN-205ENST00000503923 RNF123Q5XPI4 1314 aa14.17□□□□□ -0.14
VCAN-205ENST00000503923 NTSR2O95665 410 aa14.17□□□□□ -0.14
VCAN-205ENST00000503923 TGFB2P61812 414 aa14.17□□□□□ -0.14
VCAN-205ENST00000503923 BRIP1Q9BX63 1249 aa14.17□□□□□ -0.14
VCAN-205ENST00000503923 CCDC191Q8NCU4 936 aa14.16□□□□□ -0.14
VCAN-205ENST00000503923 KIF16BQ96L93 1317 aa14.15□□□□□ -0.14
VCAN-205ENST00000503923 F6X3S4 739 aa14.15□□□□□ -0.14
VCAN-205ENST00000503923 PDE6BP35913 854 aa14.15□□□□□ -0.14
VCAN-205ENST00000503923 ERFEQ4G0M1 354 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms