RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 EVI5LQ96CN4 794 aa18.85■□□□□ 0.61
HMGXB3-202ENST00000503427 COL17A1Q9UMD9 1497 aaPredicted RBP18.85■□□□□ 0.61
HMGXB3-202ENST00000503427 BAG4O95429 457 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-202ENST00000503427 TANGO6Q9C0B7 1094 aa18.85■□□□□ 0.61
HMGXB3-202ENST00000503427 EPB41L2O43491 1005 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-202ENST00000503427 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
HMGXB3-202ENST00000503427 A0A1W2PP64 1363 aa18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 KLHL40Q2TBA0 621 aa18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 TTC22Q5TAA0 569 aa18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 ZCRB1Q8TBF4 217 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 MCM5P33992 734 aa18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 TSPYL1Q9H0U9 437 aa18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 BMP2KQ9NSY1 1161 aaPredicted RBP18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 ANKRD13DQ6ZTN6 518 aa18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 DDX19AQ9NUU7 478 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-202ENST00000503427 ARHGAP29Q52LW3 1261 aa18.83■□□□□ 0.61
HMGXB3-202ENST00000503427 NUCB1Q02818 461 aa18.83■□□□□ 0.61
HMGXB3-202ENST00000503427 NPC1L1Q9UHC9 1359 aa18.83■□□□□ 0.61
HMGXB3-202ENST00000503427 ZSCAN12O43309 604 aa18.83■□□□□ 0.6
HMGXB3-202ENST00000503427 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
HMGXB3-202ENST00000503427 UBE3BQ7Z3V4 1068 aa18.82■□□□□ 0.6
HMGXB3-202ENST00000503427 KIF18AQ8NI77 898 aa18.82■□□□□ 0.6
HMGXB3-202ENST00000503427 C8orf76Q96K31 380 aa18.82■□□□□ 0.6
HMGXB3-202ENST00000503427 NAPBQ9H115 298 aa18.82■□□□□ 0.6
HMGXB3-202ENST00000503427 USP25Q9UHP3 1055 aa18.82■□□□□ 0.6
HMGXB3-202ENST00000503427 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 SKIDA1Q1XH10 827 aa18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 ZSCAN29Q8IWY8 852 aaPredicted RBP18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 PER1O15534 1290 aaPredicted RBP18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 ZHX3Q9H4I2 956 aa18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 TMOD2Q9NZR1 351 aa18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 CCDC196A0A1B0GTZ2 297 aa18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 STX6O43752 255 aa18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 CDC5LQ99459 802 aaKnown RBP18.81■□□□□ 0.6
HMGXB3-202ENST00000503427 NEMFO60524 1076 aa18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 CLIP2Q9UDT6 1046 aa18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 NEO1Q92859 1461 aa18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 GPTP24298 496 aa18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 MRPL50Q8N5N7 158 aaKnown RBP18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 ZRANB1Q9UGI0 708 aa18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 EIF5P55010 431 aaKnown RBP18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 TTF1Q15361 905 aaPredicted RBP18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 TMCO3Q6UWJ1 677 aa18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 LDHAL6AQ6ZMR3 332 aa18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 PKNOX2Q96KN3 472 aa18.8■□□□□ 0.6
HMGXB3-202ENST00000503427 ATP5J2-PTCD1G3V325 749 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 KCNA6P17658 529 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 CHPF2Q9P2E5 772 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 TARBP1Q13395 1621 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 UVSSAQ2YD98 709 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 GBP3Q9H0R5 595 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 ANKIB1Q9P2G1 1089 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 KIAA0754O94854 1291 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 MTHFSDQ2M296 383 aaKnown RBP18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 C8orf58Q8NAV2 365 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 RNF41Q9H4P4 317 aaPredicted RBP18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 PCDHB15Q9Y5E8 787 aa18.79■□□□□ 0.6
HMGXB3-202ENST00000503427 USP5P45974 858 aa18.78■□□□□ 0.6
HMGXB3-202ENST00000503427 GJB2P29033 226 aa18.78■□□□□ 0.6
HMGXB3-202ENST00000503427 SOS1Q07889 1333 aaPredicted RBP18.78■□□□□ 0.6
HMGXB3-202ENST00000503427 DZIP1Q86YF9 867 aaKnown RBP18.78■□□□□ 0.6
HMGXB3-202ENST00000503427 ANKRD44Q8N8A2 993 aa18.78■□□□□ 0.6
HMGXB3-202ENST00000503427 KIAA1328Q86T90 577 aa18.78■□□□□ 0.6
HMGXB3-202ENST00000503427 ZNF213O14771 459 aa18.77■□□□□ 0.6
HMGXB3-202ENST00000503427 CCDC148Q8NFR7 591 aa18.77■□□□□ 0.6
HMGXB3-202ENST00000503427 UBE2HP62256 183 aa18.77■□□□□ 0.6
HMGXB3-202ENST00000503427 CKAP2LQ8IYA6 745 aa18.77■□□□□ 0.6
HMGXB3-202ENST00000503427 RHPN1Q8TCX5 695 aa18.77■□□□□ 0.6
HMGXB3-202ENST00000503427 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
HMGXB3-202ENST00000503427 KSR2Q6VAB6 950 aa18.77■□□□□ 0.6
HMGXB3-202ENST00000503427 MEIS3Q99687 375 aa18.77■□□□□ 0.6
HMGXB3-202ENST00000503427 TOP1P11387 765 aaKnown RBP18.77■□□□□ 0.59
HMGXB3-202ENST00000503427 SLF2Q8IX21 1173 aa18.77■□□□□ 0.59
HMGXB3-202ENST00000503427 GCP02774 474 aa18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 ANXA1P04083 346 aa18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 PHAXQ9H814 394 aaKnown RBP18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 GDPD2Q9HCC8 539 aa18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 MINDY4BA8MYZ0 360 aa18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 CAVIN2O95810 425 aa18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 XAGE3Q8WTP9 111 aa18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 ARHGEF5Q12774 1597 aa18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 MAP3K5Q99683 1374 aa18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 SSBP05455 408 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 ZNF397Q8NF99 534 aaPredicted RBP18.76■□□□□ 0.59
HMGXB3-202ENST00000503427 POLR3DP05423 398 aaPredicted RBP18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 CCDC102AQ96A19 550 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 EDC4Q6P2E9 1401 aaKnown RBP18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 GSDMDP57764 484 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 PDCL3Q9H2J4 239 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 IQCA1Q86XH1 822 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 HMG20BQ9P0W2 317 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 ADCY5O95622 1261 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 TNNT1P13805 278 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 COPS6Q7L5N1 327 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 IP6K1Q92551 441 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 EYA1Q99502 592 aa18.75■□□□□ 0.59
HMGXB3-202ENST00000503427 C8orf34Q49A92 452 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms