RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 RGPD2P0DJD1 1756 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 KIF13BQ9NQT8 1826 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 TCERG1O14776 1098 aaKnown RBP6.95□□□□□ -1.3
HTT-202ENST00000502820 TRPA1O75762 1119 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 EPS15P42566 896 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 ST5P78524 1137 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 SLC39A6Q13433 755 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 SOGA3Q5TF21 947 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 CNBD1Q8NA66 436 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 BRIP1Q9BX63 1249 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 HDAC9Q9UKV0 1011 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 TBC1D2BQ9UPU7 963 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 ZBTB1Q9Y2K1 713 aa6.95□□□□□ -1.3
HTT-202ENST00000502820 NEFLP07196 543 aa6.94□□□□□ -1.3
HTT-202ENST00000502820 BRPF1P55201 1214 aaPredicted RBP6.94□□□□□ -1.3
HTT-202ENST00000502820 FKBP4Q02790 459 aaKnown RBP eCLIP6.94□□□□□ -1.3
HTT-202ENST00000502820 PRR5LQ6MZQ0 368 aa6.94□□□□□ -1.3
HTT-202ENST00000502820 YTHDC1Q96MU7 727 aaKnown RBP6.94□□□□□ -1.3
HTT-202ENST00000502820 ZIC5Q96T25 663 aa6.94□□□□□ -1.3
HTT-202ENST00000502820 BCL2L12Q9HB09 334 aa6.94□□□□□ -1.3
HTT-202ENST00000502820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.94□□□□□ -1.3
HTT-202ENST00000502820 SOS1Q07889 1333 aaPredicted RBP6.94□□□□□ -1.3
HTT-202ENST00000502820 ARFGEF1Q9Y6D6 1849 aa6.94□□□□□ -1.3
HTT-202ENST00000502820 COL15A1P39059 1388 aa6.94□□□□□ -1.3
HTT-202ENST00000502820 TIAM2Q8IVF5 1701 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 IARSP41252 1262 aaKnown RBP6.93□□□□□ -1.3
HTT-202ENST00000502820 SAPCD2Q86UD0 394 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 GPC2Q8N158 579 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 SLC17A8Q8NDX2 589 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 MASTLQ96GX5 879 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 SETDB2Q96T68 719 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 POLR3GLQ9BT43 218 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 GLIS2Q9BZE0 524 aaPredicted RBP6.93□□□□□ -1.3
HTT-202ENST00000502820 HPS5Q9UPZ3 1129 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 LTBP3Q9NS15 1303 aa6.93□□□□□ -1.3
HTT-202ENST00000502820 CYP19A1P11511 503 aaPredicted RBP6.92□□□□□ -1.3
HTT-202ENST00000502820 GTF2E1P29083 439 aaPredicted RBP6.92□□□□□ -1.3
HTT-202ENST00000502820 HUNKP57058 714 aa6.92□□□□□ -1.3
HTT-202ENST00000502820 AKAP4Q5JQC9 854 aa6.92□□□□□ -1.3
HTT-202ENST00000502820 STYK1Q6J9G0 422 aa6.92□□□□□ -1.3
HTT-202ENST00000502820 PDZRN3Q9UPQ7 1066 aa6.92□□□□□ -1.3
HTT-202ENST00000502820 SRGNP10124 158 aa6.91□□□□□ -1.3
HTT-202ENST00000502820 KIF23Q02241 960 aaPredicted RBP6.91□□□□□ -1.3
HTT-202ENST00000502820 NOGQ13253 232 aa6.91□□□□□ -1.3
HTT-202ENST00000502820 EIF4A2Q14240 407 aaKnown RBP6.91□□□□□ -1.3
HTT-202ENST00000502820 CDCA8Q53HL2 280 aa6.91□□□□□ -1.3
HTT-202ENST00000502820 DLK2Q6UY11 383 aa6.91□□□□□ -1.3
HTT-202ENST00000502820 CTU1Q7Z7A3 348 aaKnown RBP6.91□□□□□ -1.3
HTT-202ENST00000502820 NBPF5PQ86XG9 351 aaPredicted RBP6.91□□□□□ -1.3
HTT-202ENST00000502820 RTKN2Q8IZC4 609 aa6.91□□□□□ -1.3
HTT-202ENST00000502820 LARGE2Q8N3Y3 721 aa6.91□□□□□ -1.3
HTT-202ENST00000502820 SBF1O95248 1867 aa6.91□□□□□ -1.3
HTT-202ENST00000502820 BRCA1P38398 1863 aaKnown RBP6.91□□□□□ -1.3
HTT-202ENST00000502820 ITGB4P16144 1822 aa6.9□□□□□ -1.3
HTT-202ENST00000502820 A0A087WZG4 1122 aa6.9□□□□□ -1.3
HTT-202ENST00000502820 FZD9O00144 591 aa6.9□□□□□ -1.3
HTT-202ENST00000502820 STARD3NLO95772 234 aa6.9□□□□□ -1.3
HTT-202ENST00000502820 ZNF157P51786 506 aaPredicted RBP6.9□□□□□ -1.3
HTT-202ENST00000502820 AMOTQ4VCS5 1084 aa6.9□□□□□ -1.3
HTT-202ENST00000502820 USP50Q70EL3 339 aaPredicted RBP6.9□□□□□ -1.3
HTT-202ENST00000502820 USP48Q86UV5 1035 aa6.9□□□□□ -1.3
HTT-202ENST00000502820 BCL2L13Q9BXK5 485 aa6.9□□□□□ -1.3
HTT-202ENST00000502820 RNF186Q9NXI6 227 aa6.9□□□□□ -1.3
HTT-202ENST00000502820 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.9□□□□□ -1.3
HTT-202ENST00000502820 MAP2P11137 1827 aaKnown RBP6.9□□□□□ -1.31
HTT-202ENST00000502820 PRKCSHP14314 528 aaPredicted RBP6.89□□□□□ -1.31
HTT-202ENST00000502820 NPR1P16066 1061 aa6.89□□□□□ -1.31
HTT-202ENST00000502820 PIP4K2AP48426 406 aaPredicted RBP6.89□□□□□ -1.31
HTT-202ENST00000502820 SCNN1DP51172 638 aa6.89□□□□□ -1.31
HTT-202ENST00000502820 AEBP1Q8IUX7 1158 aa6.89□□□□□ -1.31
HTT-202ENST00000502820 NIM1KQ8IY84 436 aa6.89□□□□□ -1.31
HTT-202ENST00000502820 TTC5Q8N0Z6 440 aa6.89□□□□□ -1.31
HTT-202ENST00000502820 CARD14Q9BXL6 1004 aa6.89□□□□□ -1.31
HTT-202ENST00000502820 WASHC2AQ641Q2 1341 aa6.89□□□□□ -1.31
HTT-202ENST00000502820 TBC1D8O95759 1140 aa6.88□□□□□ -1.31
HTT-202ENST00000502820 FXR1P51114 621 aaKnown RBP eCLIP6.88□□□□□ -1.31
HTT-202ENST00000502820 RBM26Q5T8P6 1007 aaKnown RBP6.88□□□□□ -1.31
HTT-202ENST00000502820 SULT6B1Q6IMI4 303 aa6.88□□□□□ -1.31
HTT-202ENST00000502820 RGMBQ6NW40 437 aa6.88□□□□□ -1.31
HTT-202ENST00000502820 TMX4Q9H1E5 349 aaPredicted RBP6.88□□□□□ -1.31
HTT-202ENST00000502820 LGR6Q9HBX8 967 aa6.88□□□□□ -1.31
HTT-202ENST00000502820 ADARB2Q9NS39 739 aaKnown RBP6.88□□□□□ -1.31
HTT-202ENST00000502820 POLKQ9UBT6 870 aa6.88□□□□□ -1.31
HTT-202ENST00000502820 VIRMAQ69YN4 1812 aaKnown RBP6.87□□□□□ -1.31
HTT-202ENST00000502820 TNRC18O15417 2968 aaPredicted RBP6.87□□□□□ -1.31
HTT-202ENST00000502820 KIF24Q5T7B8 1368 aa6.87□□□□□ -1.31
HTT-202ENST00000502820 CCER2I3L3R5 266 aa6.87□□□□□ -1.31
HTT-202ENST00000502820 PPIP5K2O43314 1243 aa6.87□□□□□ -1.31
HTT-202ENST00000502820 A1BGP04217 495 aa6.87□□□□□ -1.31
HTT-202ENST00000502820 AOC3Q16853 763 aa6.87□□□□□ -1.31
HTT-202ENST00000502820 CDC37L1Q7L3B6 337 aa6.87□□□□□ -1.31
HTT-202ENST00000502820 C2orf69Q8N8R5 385 aa6.87□□□□□ -1.31
HTT-202ENST00000502820 SLC52A2Q9HAB3 445 aa6.87□□□□□ -1.31
HTT-202ENST00000502820 COLQQ9Y215 455 aaPredicted RBP6.87□□□□□ -1.31
HTT-202ENST00000502820 HSPA5P11021 654 aaKnown RBP6.86□□□□□ -1.31
HTT-202ENST00000502820 ALDH1B1P30837 517 aa6.86□□□□□ -1.31
HTT-202ENST00000502820 GMPSP49915 693 aaPredicted RBP6.86□□□□□ -1.31
HTT-202ENST00000502820 EIF4G2P78344 907 aaKnown RBP eCLIP6.86□□□□□ -1.31
HTT-202ENST00000502820 MKRN3Q13064 507 aaKnown RBP6.86□□□□□ -1.31
HTT-202ENST00000502820 TPTE2Q6XPS3 522 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms