RNA–Protein interactions for RNA: ENST00000502727.5

PRDM2-212, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-212ENST00000502727 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
PRDM2-212ENST00000502727 DCTN1Q14203 1278 aa13.23□□□□□ -0.29
PRDM2-212ENST00000502727 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
PRDM2-212ENST00000502727 ASTLQ6HA08 431 aaPredicted RBP13.23□□□□□ -0.29
PRDM2-212ENST00000502727 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
PRDM2-212ENST00000502727 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
PRDM2-212ENST00000502727 PARP3Q9Y6F1 533 aa13.23□□□□□ -0.29
PRDM2-212ENST00000502727 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
PRDM2-212ENST00000502727 COL15A1P39059 1388 aa13.22□□□□□ -0.29
PRDM2-212ENST00000502727 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
PRDM2-212ENST00000502727 A0A087WZG4 1122 aa13.22□□□□□ -0.29
PRDM2-212ENST00000502727 KCNQ3O43525 872 aa13.22□□□□□ -0.29
PRDM2-212ENST00000502727 CANXP27824 592 aaKnown RBP13.22□□□□□ -0.29
PRDM2-212ENST00000502727 TAF7Q15545 349 aaPredicted RBP13.22□□□□□ -0.29
PRDM2-212ENST00000502727 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
PRDM2-212ENST00000502727 BRCA1P38398 1863 aaKnown RBP13.21□□□□□ -0.29
PRDM2-212ENST00000502727 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRDM2-212ENST00000502727 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
PRDM2-212ENST00000502727 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.29
PRDM2-212ENST00000502727 KDM3BQ7LBC6 1761 aa13.21□□□□□ -0.29
PRDM2-212ENST00000502727 ATMINO43313 823 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-212ENST00000502727 TM4SF1P30408 202 aa13.2□□□□□ -0.3
PRDM2-212ENST00000502727 TGFB2P61812 414 aa13.2□□□□□ -0.3
PRDM2-212ENST00000502727 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-212ENST00000502727 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
PRDM2-212ENST00000502727 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
PRDM2-212ENST00000502727 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
PRDM2-212ENST00000502727 PNISRQ8TF01 805 aaKnown RBP13.19□□□□□ -0.3
PRDM2-212ENST00000502727 ARFGEF1Q9Y6D6 1849 aa13.18□□□□□ -0.3
PRDM2-212ENST00000502727 A1BGP04217 495 aa13.18□□□□□ -0.3
PRDM2-212ENST00000502727 DDR1Q08345 913 aa13.18□□□□□ -0.3
PRDM2-212ENST00000502727 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
PRDM2-212ENST00000502727 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
PRDM2-212ENST00000502727 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
PRDM2-212ENST00000502727 NRXN2Q9P2S2 1712 aa13.18□□□□□ -0.3
PRDM2-212ENST00000502727 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
PRDM2-212ENST00000502727 PXDNLA1KZ92 1463 aa13.17□□□□□ -0.3
PRDM2-212ENST00000502727 POLRMTO00411 1230 aaKnown RBP13.17□□□□□ -0.3
PRDM2-212ENST00000502727 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
PRDM2-212ENST00000502727 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
PRDM2-212ENST00000502727 SCN7AQ01118 1682 aa13.16□□□□□ -0.3
PRDM2-212ENST00000502727 A0A0G2JLW4 131 aa13.16□□□□□ -0.3
PRDM2-212ENST00000502727 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
PRDM2-212ENST00000502727 RIPK4P57078 832 aa13.16□□□□□ -0.3
PRDM2-212ENST00000502727 NFIXQ14938 502 aa13.16□□□□□ -0.3
PRDM2-212ENST00000502727 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
PRDM2-212ENST00000502727 ZNF330Q9Y3S2 320 aaPredicted RBP13.16□□□□□ -0.3
PRDM2-212ENST00000502727 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
PRDM2-212ENST00000502727 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
PRDM2-212ENST00000502727 DPEP1P16444 411 aa13.15□□□□□ -0.3
PRDM2-212ENST00000502727 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
PRDM2-212ENST00000502727 LMOD3Q0VAK6 560 aa13.15□□□□□ -0.3
PRDM2-212ENST00000502727 ZNF784Q8NCA9 323 aaPredicted RBP13.15□□□□□ -0.3
PRDM2-212ENST00000502727 RUNDC1Q96C34 613 aa13.15□□□□□ -0.3
PRDM2-212ENST00000502727 THUMPD2Q9BTF0 503 aaKnown RBP13.15□□□□□ -0.3
PRDM2-212ENST00000502727 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
PRDM2-212ENST00000502727 SERPINB2P05120 415 aa13.14□□□□□ -0.31
PRDM2-212ENST00000502727 ATN1P54259 1190 aaPredicted RBP13.14□□□□□ -0.31
PRDM2-212ENST00000502727 WWC3Q9ULE0 1092 aa13.14□□□□□ -0.31
PRDM2-212ENST00000502727 NUP98P52948 1817 aa13.13□□□□□ -0.31
PRDM2-212ENST00000502727 DLEC1Q9Y238 1755 aa13.13□□□□□ -0.31
PRDM2-212ENST00000502727 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-212ENST00000502727 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-212ENST00000502727 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
PRDM2-212ENST00000502727 CCDC146Q8IYE0 955 aa13.13□□□□□ -0.31
PRDM2-212ENST00000502727 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
PRDM2-212ENST00000502727 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
PRDM2-212ENST00000502727 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
PRDM2-212ENST00000502727 ANKRD31Q8N7Z5 1873 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 NBPF26B4DH59 902 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 KCNA3P22001 575 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-212ENST00000502727 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
PRDM2-212ENST00000502727 BICDL1Q6ZP65 573 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
PRDM2-212ENST00000502727 NBPF15Q8N660 670 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-212ENST00000502727 PIM2Q9P1W9 311 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 BCS1LQ9Y276 419 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 SBF1O95248 1867 aa13.12□□□□□ -0.31
PRDM2-212ENST00000502727 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
PRDM2-212ENST00000502727 IER5LQ5T953 404 aa13.11□□□□□ -0.31
PRDM2-212ENST00000502727 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
PRDM2-212ENST00000502727 TSPYL4Q9UJ04 414 aa13.11□□□□□ -0.31
PRDM2-212ENST00000502727 RRP7AQ9Y3A4 280 aaKnown RBP13.11□□□□□ -0.31
PRDM2-212ENST00000502727 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
PRDM2-212ENST00000502727 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
PRDM2-212ENST00000502727 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
PRDM2-212ENST00000502727 CARMIL3Q8ND23 1372 aa13.09□□□□□ -0.31
PRDM2-212ENST00000502727 CHRNA5P30532 468 aa13.09□□□□□ -0.31
PRDM2-212ENST00000502727 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
PRDM2-212ENST00000502727 DALRD3Q5D0E6 543 aaKnown RBP13.09□□□□□ -0.31
PRDM2-212ENST00000502727 ZNF652Q9Y2D9 606 aa13.09□□□□□ -0.31
PRDM2-212ENST00000502727 UTRNP46939 3433 aa13.09□□□□□ -0.31
PRDM2-212ENST00000502727 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
PRDM2-212ENST00000502727 ERBB4Q15303 1308 aa13.08□□□□□ -0.32
PRDM2-212ENST00000502727 CHL1O00533 1208 aa13.07□□□□□ -0.32
PRDM2-212ENST00000502727 PRR5LQ6MZQ0 368 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms