RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CTNNA3Q9UI47 895 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 EMILIN1Q9Y6C2 1016 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 TYRO3Q06418 890 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 IQCEQ6IPM2 695 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 MEIS3Q99687 375 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 PTGS1P23219 599 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 TOM1L2Q6ZVM7 507 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 FSIP1Q8NA03 581 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 HMGB1P09429 215 aaKnown RBP20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 ZSCAN16Q9H4T2 348 aaPredicted RBP20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 KIF5CO60282 957 aa20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 DNM1Q05193 864 aaKnown RBP20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 GABPB1Q06547 395 aaPredicted RBP20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 EVI5LQ96CN4 794 aa20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 MAGEC2Q9UBF1 373 aaPredicted RBP20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 FAM107BQ9H098 131 aa20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 DACT1Q9NYF0 836 aa20.06■□□□□ 0.8
HMGXB3-201ENST00000502717 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
HMGXB3-201ENST00000502717 FLIIQ13045 1269 aa20.05■□□□□ 0.8
HMGXB3-201ENST00000502717 ECHDC1Q9NTX5 307 aa20.05■□□□□ 0.8
HMGXB3-201ENST00000502717 PUS7Q96PZ0 661 aaKnown RBP20.05■□□□□ 0.8
HMGXB3-201ENST00000502717 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
HMGXB3-201ENST00000502717 IGSF3O75054 1194 aa20.05■□□□□ 0.8
HMGXB3-201ENST00000502717 CCAR1Q8IX12 1150 aaKnown RBP20.05■□□□□ 0.8
HMGXB3-201ENST00000502717 PATL2C9JE40 543 aaKnown RBP20.04■□□□□ 0.8
HMGXB3-201ENST00000502717 MAP9Q49MG5 647 aa20.04■□□□□ 0.8
HMGXB3-201ENST00000502717 RIOK3O14730 519 aaKnown RBP20.04■□□□□ 0.8
HMGXB3-201ENST00000502717 CRACR2AQ9BSW2 395 aa20.04■□□□□ 0.8
HMGXB3-201ENST00000502717 MCM3P25205 808 aa20.04■□□□□ 0.8
HMGXB3-201ENST00000502717 NME9Q86XW9 330 aa20.04■□□□□ 0.8
HMGXB3-201ENST00000502717 SRRTQ9BXP5 876 aaKnown RBP20.04■□□□□ 0.8
HMGXB3-201ENST00000502717 TRIM22Q8IYM9 498 aa20.03■□□□□ 0.8
HMGXB3-201ENST00000502717 FAM177BA6PVY3 158 aa20.03■□□□□ 0.8
HMGXB3-201ENST00000502717 SLC3A2P08195 630 aaKnown RBP20.03■□□□□ 0.8
HMGXB3-201ENST00000502717 CEP85Q6P2H3 762 aa20.03■□□□□ 0.8
HMGXB3-201ENST00000502717 CCDC148Q8NFR7 591 aa20.03■□□□□ 0.8
HMGXB3-201ENST00000502717 KIF4BQ2VIQ3 1234 aa20.03■□□□□ 0.8
HMGXB3-201ENST00000502717 TMEM63CQ9P1W3 806 aa20.03■□□□□ 0.8
HMGXB3-201ENST00000502717 IBTKQ9P2D0 1353 aaPredicted RBP20.03■□□□□ 0.8
HMGXB3-201ENST00000502717 CCDC191Q8NCU4 936 aa20.02■□□□□ 0.8
HMGXB3-201ENST00000502717 TXLNAP40222 546 aa20.02■□□□□ 0.8
HMGXB3-201ENST00000502717 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.8
HMGXB3-201ENST00000502717 NPHP3Q7Z494 1330 aa20.02■□□□□ 0.8
HMGXB3-201ENST00000502717 ZNF521Q96K83 1311 aa20.02■□□□□ 0.8
HMGXB3-201ENST00000502717 LMAN1P49257 510 aa20.02■□□□□ 0.8
HMGXB3-201ENST00000502717 CCDC158Q5M9N0 1113 aa20.02■□□□□ 0.8
HMGXB3-201ENST00000502717 TBC1D2BQ9UPU7 963 aa20.02■□□□□ 0.8
HMGXB3-201ENST00000502717 C8orf58Q8NAV2 365 aa20.02■□□□□ 0.79
HMGXB3-201ENST00000502717 HMG20BQ9P0W2 317 aa20.02■□□□□ 0.79
HMGXB3-201ENST00000502717 DNAJC25Q9H1X3 360 aa20.01■□□□□ 0.79
HMGXB3-201ENST00000502717 GOLGA6L10A6NI86 522 aa20.01■□□□□ 0.79
HMGXB3-201ENST00000502717 FYB1O15117 783 aa20.01■□□□□ 0.79
HMGXB3-201ENST00000502717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.01■□□□□ 0.79
HMGXB3-201ENST00000502717 ARFGAP3Q9NP61 516 aa20.01■□□□□ 0.79
HMGXB3-201ENST00000502717 KDM5CP41229 1560 aa20.01■□□□□ 0.79
HMGXB3-201ENST00000502717 VPS53Q5VIR6 699 aa20.01■□□□□ 0.79
HMGXB3-201ENST00000502717 BOLA2Q9H3K6 86 aa20.01■□□□□ 0.79
HMGXB3-201ENST00000502717 SHTN1A0MZ66 631 aa20■□□□□ 0.79
HMGXB3-201ENST00000502717 U2AF2P26368 475 aaKnown RBP eCLIP20■□□□□ 0.796e-9■■■■□ 22.7
HMGXB3-201ENST00000502717 ZNF530Q6P9A1 599 aaPredicted RBP20■□□□□ 0.79
HMGXB3-201ENST00000502717 FAM83GA6ND36 823 aa20■□□□□ 0.79
HMGXB3-201ENST00000502717 CCDC181Q5TID7 509 aa20■□□□□ 0.79
HMGXB3-201ENST00000502717 C8orf76Q96K31 380 aa20■□□□□ 0.79
HMGXB3-201ENST00000502717 AMOTL2Q9Y2J4 779 aa20■□□□□ 0.79
HMGXB3-201ENST00000502717 PDE4CQ08493 712 aa20■□□□□ 0.79
HMGXB3-201ENST00000502717 FAM193AP78312 1265 aa19.99■□□□□ 0.79
HMGXB3-201ENST00000502717 NECAB1Q8N987 351 aa19.99■□□□□ 0.79
HMGXB3-201ENST00000502717 RHPN1Q8TCX5 695 aa19.99■□□□□ 0.79
HMGXB3-201ENST00000502717 ERO1AQ96HE7 468 aa19.99■□□□□ 0.79
HMGXB3-201ENST00000502717 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.99■□□□□ 0.794e-7■■□□□ 14.5
HMGXB3-201ENST00000502717 TOM1O60784 492 aa19.99■□□□□ 0.79
HMGXB3-201ENST00000502717 SYT1P21579 422 aa19.99■□□□□ 0.79
HMGXB3-201ENST00000502717 ATP8B2P98198 1209 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 TAF7Q15545 349 aaPredicted RBP19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 MYO6Q9UM54 1294 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 V9GYY5 206 aaPredicted RBP19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 CHMLP26374 656 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 PPP1R42Q7Z4L9 355 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 IVLP07476 585 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 AK2P54819 239 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 GNG11P61952 73 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 STIM1Q13586 685 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 DNAI1Q9UI46 699 aa19.98■□□□□ 0.79
HMGXB3-201ENST00000502717 TTC39AQ5SRH9 613 aa19.97■□□□□ 0.79
HMGXB3-201ENST00000502717 TSPYL6Q8N831 410 aa19.97■□□□□ 0.79
HMGXB3-201ENST00000502717 DNAAF4Q8WXU2 420 aa19.97■□□□□ 0.79
HMGXB3-201ENST00000502717 BCL2L12Q9HB09 334 aa19.97■□□□□ 0.79
HMGXB3-201ENST00000502717 KCNH5Q8NCM2 988 aa19.97■□□□□ 0.79
HMGXB3-201ENST00000502717 CCDC69A6NI79 296 aa19.97■□□□□ 0.79
HMGXB3-201ENST00000502717 WASF1Q92558 559 aa19.96■□□□□ 0.79
HMGXB3-201ENST00000502717 IMMTQ16891 758 aaKnown RBP19.96■□□□□ 0.79
HMGXB3-201ENST00000502717 BRD1O95696 1058 aa19.96■□□□□ 0.79
HMGXB3-201ENST00000502717 LUZP1Q86V48 1076 aa19.96■□□□□ 0.79
HMGXB3-201ENST00000502717 LUC7LQ9NQ29 371 aaKnown RBP19.96■□□□□ 0.79
HMGXB3-201ENST00000502717 TNRQ92752 1358 aa19.95■□□□□ 0.79
HMGXB3-201ENST00000502717 C17orf53Q8N3J3 647 aaPredicted RBP19.95■□□□□ 0.78
HMGXB3-201ENST00000502717 GUCY1B3Q02153 619 aa19.95■□□□□ 0.78
HMGXB3-201ENST00000502717 MAST1Q9Y2H9 1570 aa19.95■□□□□ 0.78
HMGXB3-201ENST00000502717 BIN1O00499 593 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms