RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 ALDH8A1Q9H2A2 487 aaPredicted RBP7.71□□□□□ -1.17
LINC00939-201ENST00000502479 EXOC6BQ9Y2D4 811 aa7.71□□□□□ -1.17
LINC00939-201ENST00000502479 GCP02774 474 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 SSFA2P28290 1259 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 CABP4P57796 275 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 DDX21Q9NR30 783 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00939-201ENST00000502479 U3KPZ7 1027 aaPredicted RBP7.71□□□□□ -1.18
LINC00939-201ENST00000502479 UTYO14607 1347 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 GOLGA6L4A6NEF3 574 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 LRSAM1Q6UWE0 723 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 G2E3Q7L622 706 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 ARHGEF25Q86VW2 580 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 TMX3Q96JJ7 454 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 SLC52A2Q9HAB3 445 aa7.71□□□□□ -1.18
LINC00939-201ENST00000502479 AACSQ86V21 672 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 ADAMTS7Q9UKP4 1686 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 MRC1P22897 1456 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 KIAA2012Q0VF49 1180 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 CCDC183Q5T5S1 534 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 ZSCAN25Q6NSZ9 544 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 C1orf167Q5SNV9 1468 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 GRM8O00222 908 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 CUL4AQ13619 759 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 FSD1Q9BTV5 496 aa7.7□□□□□ -1.18
LINC00939-201ENST00000502479 AK9Q5TCS8 1911 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 BRPF3Q9ULD4 1205 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 AKAP2Q9Y2D5 859 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 PRPF40AO75400 957 aaKnown RBP7.69□□□□□ -1.18
LINC00939-201ENST00000502479 CLCN1P35523 988 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 ZSCAN23Q3MJ62 389 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 KIF6Q6ZMV9 814 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 C16orf71Q8IYS4 520 aaPredicted RBP7.69□□□□□ -1.18
LINC00939-201ENST00000502479 NAP1L5Q96NT1 182 aaPredicted RBP7.69□□□□□ -1.18
LINC00939-201ENST00000502479 KIF2CQ99661 725 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 METTL22Q9BUU2 404 aaPredicted RBP7.69□□□□□ -1.18
LINC00939-201ENST00000502479 TPM4P67936 248 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 NUTM1Q86Y26 1132 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 NLRP2Q9NX02 1062 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 PI4KAP2A4QPH2 592 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 SGSM2O43147 1006 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 NBPF6Q5VWK0 638 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 PI4KAP1Q8N8J0 262 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 NBPF4Q96M43 638 aa7.69□□□□□ -1.18
LINC00939-201ENST00000502479 HSP90AB3PQ58FF7 597 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 MTERF4Q7Z6M4 381 aaKnown RBP7.68□□□□□ -1.18
LINC00939-201ENST00000502479 USP44Q9H0E7 712 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 GPR108Q9NPR9 543 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 PKD1L3Q7Z443 1732 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 SIPA1L3O60292 1781 aaPredicted RBP7.68□□□□□ -1.18
LINC00939-201ENST00000502479 SALL3Q9BXA9 1300 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 CAVIN2O95810 425 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 ATL3Q6DD88 541 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 CAVIN1Q6NZI2 390 aaKnown RBP7.68□□□□□ -1.18
LINC00939-201ENST00000502479 TMEM87AQ8NBN3 555 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 ZSCAN22P10073 491 aaPredicted RBP7.68□□□□□ -1.18
LINC00939-201ENST00000502479 XRCC6P12956 609 aaKnown RBP eCLIP7.68□□□□□ -1.18
LINC00939-201ENST00000502479 CHAF1AQ13111 956 aaPredicted RBP7.68□□□□□ -1.18
LINC00939-201ENST00000502479 RUFY3Q7L099 469 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 HELLSQ9NRZ9 838 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 TERF1P54274 439 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 UBE2HP62256 183 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 KRT24Q2M2I5 525 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 MPRIPQ6WCQ1 1025 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 ZNF396Q96N95 335 aaPredicted RBP7.68□□□□□ -1.18
LINC00939-201ENST00000502479 CTNNA3Q9UI47 895 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 FBXO3Q9UK99 471 aa7.68□□□□□ -1.18
LINC00939-201ENST00000502479 CRYBG1Q9Y4K1 1723 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 ERVV-2B6SEH9 535 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 GIGYF1O75420 1035 aaPredicted RBP7.67□□□□□ -1.18
LINC00939-201ENST00000502479 PLEKHG5O94827 1062 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 BRD1O95696 1058 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 FGD1P98174 961 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 RGS22Q8NE09 1264 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 PLBD2Q8NHP8 589 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 PPP1R9BQ96SB3 815 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 CCDC171Q6TFL3 1326 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 CPDO75976 1380 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 DHX16O60231 1041 aaKnown RBP7.67□□□□□ -1.18
LINC00939-201ENST00000502479 CASTP20810 708 aaKnown RBP7.67□□□□□ -1.18
LINC00939-201ENST00000502479 ZRSR1Q15695 479 aaKnown RBP7.67□□□□□ -1.18
LINC00939-201ENST00000502479 ZSCAN30Q86W11 494 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC00939-201ENST00000502479 PNMA6EA0A0J9YXQ4 647 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 CYP2E1P05181 493 aaPredicted RBP7.67□□□□□ -1.18
LINC00939-201ENST00000502479 CCDC158Q5M9N0 1113 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 BCL11BQ9C0K0 894 aaPredicted RBP7.67□□□□□ -1.18
LINC00939-201ENST00000502479 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.67□□□□□ -1.18
LINC00939-201ENST00000502479 ATG3Q9NT62 314 aa7.67□□□□□ -1.18
LINC00939-201ENST00000502479 ABCC12Q96J65 1359 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 H3BQV1 296 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 IFFO2Q5TF58 517 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 BLOC1S2Q6QNY1 142 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 SPEF2Q9C093 1822 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 NRDCO43847 1150 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 PHKG2P15735 406 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 KRT85P78386 507 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 ZNF790Q6PG37 636 aa7.66□□□□□ -1.18
LINC00939-201ENST00000502479 CWC27Q6UX04 472 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms