RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 RRP7BPQ9NSQ0 103 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 K7ELQ4 463 aaPredicted RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 SEC24BO95487 1268 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 PRPHP41219 470 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 PNMA8AQ86V59 439 aaPredicted RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 EXOC1Q9NV70 894 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 GNL3LQ9NVN8 582 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 PHACTR2O75167 634 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 PIP4K2BP78356 416 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 SYNE3Q6ZMZ3 975 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 CWC25Q9NXE8 425 aaPredicted RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 GNG11P61952 73 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 CASQ2O14958 399 aaPredicted RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 CASTP20810 708 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 BAIAP2L1Q9UHR4 511 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 TBC1D2Q9BYX2 928 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 DHX57Q6P158 1386 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 CEBPZQ03701 1054 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 TRIM68Q6AZZ1 485 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 RNF217Q8TC41 542 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 ATP6V0A1Q93050 837 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 UNC45AQ9H3U1 944 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 MTUS1Q9ULD2 1270 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 ZNF711Q9Y462 761 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 HIP1RO75146 1068 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 HNRNPCP07910 306 aaKnown RBP eCLIP5.49□□□□□ -1.534e-8■■□□□ 14.3
NEAT1-202ENST00000501122 TMF1P82094 1093 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 IQCA1Q86XH1 822 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 NSRP1Q9H0G5 558 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 BSDC1Q9NW68 430 aaPredicted RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 ITGB1BP2Q9UKP3 347 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 UBE4AQ14139 1066 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 MYLK4Q86YV6 388 aaPredicted RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 PPP1R9BQ96SB3 815 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 SEC62Q99442 399 aaKnown RBP5.49□□□□□ -1.53
NEAT1-202ENST00000501122 ERBB4Q15303 1308 aa5.49□□□□□ -1.53
NEAT1-202ENST00000501122 CEP162Q5TB80 1403 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 NEK4P51957 841 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 BRPF1P55201 1214 aaPredicted RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 GJC2Q5T442 439 aaPredicted RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 ZSWIM4Q9H7M6 989 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 ENO4A6NNW6 628 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 CHUKO15111 745 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 ZKSCAN1P17029 563 aaPredicted RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 PRIM1P49642 420 aaKnown RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 CXorf38Q8TB03 319 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 MSL3Q8N5Y2 521 aaKnown RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 PRPF4BQ13523 1007 aaKnown RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 ACTN2P35609 894 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 SMC6Q96SB8 1091 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 TRIM7Q9C029 511 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 TEX11Q8IYF3 940 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 BAG1Q99933 345 aaPredicted RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 UPF3BQ9BZI7 483 aaKnown RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 FIBPO43427 364 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 SRGAP3O43295 1099 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 EGFL6Q8IUX8 553 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 PROCA1Q8NCQ7 364 aaPredicted RBP5.48□□□□□ -1.53
NEAT1-202ENST00000501122 USP33Q8TEY7 942 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 CARD11Q9BXL7 1154 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 PLCB1Q9NQ66 1216 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 STAMBPO95630 424 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 GPATCH3Q96I76 525 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 NUP62CLQ9H1M0 184 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 DAAM1Q9Y4D1 1078 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 PIBF1Q8WXW3 757 aa5.48□□□□□ -1.53
NEAT1-202ENST00000501122 PRPF38AQ8NAV1 312 aaKnown RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 CCDC113Q9H0I3 377 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 COG6Q9Y2V7 657 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 SLC44A4Q53GD3 710 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 GSDMBQ8TAX9 411 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 ARFGAP2Q8N6H7 521 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 LRSAM1Q6UWE0 723 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 TRIM11Q96F44 468 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.47□□□□□ -1.534e-8■□□□□ 8.9
NEAT1-202ENST00000501122 CCDC30Q5VVM6 783 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 CTAGE15A4D2H0 777 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 MAP4K4O95819 1239 aaPredicted RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 CTAGE8P0CG41 777 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 CTAGE4Q8IX94 777 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 SMC1BQ8NDV3 1235 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 CAND2O75155 1236 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 PRR16Q569H4 304 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 TCERG1LQ5VWI1 586 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 SOGA3Q5TF21 947 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 SLC30A9Q6PML9 568 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 NGEFQ8N5V2 710 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 UBA5Q9GZZ9 404 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 ZSCAN20P17040 1043 aaPredicted RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 ZNF396Q96N95 335 aaPredicted RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 DNAI1Q9UI46 699 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 PAFAH1B1P43034 410 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 FLIIQ13045 1269 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 MAATS1Q7Z4T9 603 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 FBXO18Q8NFZ0 1043 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 STMN2Q93045 179 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 NAA15Q9BXJ9 866 aaKnown RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 ANTXR1Q9H6X2 564 aa5.47□□□□□ -1.53
NEAT1-202ENST00000501122 CAPRIN2Q6IMN6 1127 aaKnown RBP5.47□□□□□ -1.53
NEAT1-202ENST00000501122 NBPF10Q6P3W6 841 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms