RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 SRGNP10124 158 aa12.43□□□□□ -0.42
HMGCL-207ENST00000498698 ST5P78524 1137 aa12.43□□□□□ -0.42
HMGCL-207ENST00000498698 RASSF7Q02833 373 aa12.43□□□□□ -0.42
HMGCL-207ENST00000498698 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
HMGCL-207ENST00000498698 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
HMGCL-207ENST00000498698 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
HMGCL-207ENST00000498698 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
HMGCL-207ENST00000498698 ERBB4Q15303 1308 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 MAP3K15Q6ZN16 1313 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 SENP3-EIF4A1A0A087X0R7 540 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 KLRG2A4D1S0 409 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-207ENST00000498698 MYL6BP14649 208 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 PRELPP51888 382 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 PDIA6Q15084 440 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 LRP10Q7Z4F1 713 aa12.42□□□□□ -0.42
HMGCL-207ENST00000498698 NFKBIEO00221 500 aa12.41□□□□□ -0.42
HMGCL-207ENST00000498698 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
HMGCL-207ENST00000498698 SCN7AQ01118 1682 aa12.41□□□□□ -0.42
HMGCL-207ENST00000498698 C21orf2O43822 256 aa12.4□□□□□ -0.42
HMGCL-207ENST00000498698 EIF2S2P20042 333 aaKnown RBP12.4□□□□□ -0.42
HMGCL-207ENST00000498698 LMNB1P20700 586 aa12.4□□□□□ -0.42
HMGCL-207ENST00000498698 KIF6Q6ZMV9 814 aa12.4□□□□□ -0.42
HMGCL-207ENST00000498698 MASTLQ96GX5 879 aa12.4□□□□□ -0.42
HMGCL-207ENST00000498698 NMRK2Q9NPI5 230 aa12.4□□□□□ -0.42
HMGCL-207ENST00000498698 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
HMGCL-207ENST00000498698 NPR1P16066 1061 aa12.39□□□□□ -0.43
HMGCL-207ENST00000498698 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
HMGCL-207ENST00000498698 PROSER3Q2NL68 480 aa12.39□□□□□ -0.43
HMGCL-207ENST00000498698 PRPF40BQ6NWY9 871 aaKnown RBP12.39□□□□□ -0.43
HMGCL-207ENST00000498698 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
HMGCL-207ENST00000498698 ZBTB3Q9H5J0 574 aa12.39□□□□□ -0.43
HMGCL-207ENST00000498698 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-207ENST00000498698 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
HMGCL-207ENST00000498698 APAF1O14727 1248 aa12.38□□□□□ -0.43
HMGCL-207ENST00000498698 ANXA1P04083 346 aa12.38□□□□□ -0.43
HMGCL-207ENST00000498698 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
HMGCL-207ENST00000498698 ZNF34Q8IZ26 560 aa12.38□□□□□ -0.43
HMGCL-207ENST00000498698 LAS1LQ9Y4W2 734 aaKnown RBP12.38□□□□□ -0.43
HMGCL-207ENST00000498698 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
HMGCL-207ENST00000498698 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
HMGCL-207ENST00000498698 TOMM70O94826 608 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 GPTP24298 496 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
HMGCL-207ENST00000498698 CCDC184Q52MB2 194 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 SUSD4Q5VX71 490 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 KDM3BQ7LBC6 1761 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
HMGCL-207ENST00000498698 ZNF853P0CG23 659 aa12.36□□□□□ -0.43
HMGCL-207ENST00000498698 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
HMGCL-207ENST00000498698 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
HMGCL-207ENST00000498698 SOGA3Q5TF21 947 aa12.36□□□□□ -0.43
HMGCL-207ENST00000498698 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
HMGCL-207ENST00000498698 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
HMGCL-207ENST00000498698 DDX21Q9NR30 783 aaKnown RBP eCLIP12.36□□□□□ -0.43
HMGCL-207ENST00000498698 ARFGEF1Q9Y6D6 1849 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-207ENST00000498698 ZNF316A6NFI3 1004 aaPredicted RBP12.35□□□□□ -0.43
HMGCL-207ENST00000498698 GLTPD2A6NH11 291 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 HOXB7P09629 217 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 HSPA6P17066 643 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 XAGE3Q8WTP9 111 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 RRAGCQ9HB90 399 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 MBIPQ9NS73 344 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 BCORQ6W2J9 1755 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
HMGCL-207ENST00000498698 NTSR2O95665 410 aa12.34□□□□□ -0.43
HMGCL-207ENST00000498698 ALDH1B1P30837 517 aa12.34□□□□□ -0.43
HMGCL-207ENST00000498698 PARP10Q53GL7 1025 aa12.34□□□□□ -0.43
HMGCL-207ENST00000498698 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
HMGCL-207ENST00000498698 DUSP27Q5VZP5 1158 aa12.34□□□□□ -0.43
HMGCL-207ENST00000498698 CHPF2Q9P2E5 772 aa12.34□□□□□ -0.43
HMGCL-207ENST00000498698 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
HMGCL-207ENST00000498698 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-207ENST00000498698 CALD1Q05682 793 aaKnown RBP12.33□□□□□ -0.44
HMGCL-207ENST00000498698 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
HMGCL-207ENST00000498698 CCDC93Q567U6 631 aa12.33□□□□□ -0.44
HMGCL-207ENST00000498698 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
HMGCL-207ENST00000498698 PPP1R42Q7Z4L9 355 aa12.33□□□□□ -0.44
HMGCL-207ENST00000498698 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
HMGCL-207ENST00000498698 IFT57Q9NWB7 429 aa12.33□□□□□ -0.44
HMGCL-207ENST00000498698 RIC1Q4ADV7 1423 aa12.32□□□□□ -0.44
HMGCL-207ENST00000498698 GNAI1P63096 354 aa12.32□□□□□ -0.44
HMGCL-207ENST00000498698 TCIRG1Q13488 830 aa12.32□□□□□ -0.44
HMGCL-207ENST00000498698 SLC10A5Q5PT55 438 aa12.32□□□□□ -0.44
HMGCL-207ENST00000498698 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
HMGCL-207ENST00000498698 UTP14AQ9BVJ6 771 aaKnown RBP12.32□□□□□ -0.44
HMGCL-207ENST00000498698 DBF4Q9UBU7 674 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-207ENST00000498698 LAMB4A4D0S4 1761 aa12.32□□□□□ -0.44
HMGCL-207ENST00000498698 DLEC1Q9Y238 1755 aa12.31□□□□□ -0.44
HMGCL-207ENST00000498698 POTECB2RU33 542 aa12.31□□□□□ -0.44
HMGCL-207ENST00000498698 VEGFAP15692 232 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms