RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SH3PXD2AQ5TCZ1 1133 aa9.06□□□□□ -0.96
SSR3-209ENST00000498205 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
SSR3-209ENST00000498205 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
SSR3-209ENST00000498205 FAM157BP0CG42 384 aa9.05□□□□□ -0.96
SSR3-209ENST00000498205 IER5Q5VY09 327 aa9.05□□□□□ -0.96
SSR3-209ENST00000498205 C7orf43Q8WVR3 580 aa9.05□□□□□ -0.96
SSR3-209ENST00000498205 ZCCHC2Q9C0B9 1178 aaKnown RBP9.05□□□□□ -0.96
SSR3-209ENST00000498205 MBIPQ9NS73 344 aa9.05□□□□□ -0.96
SSR3-209ENST00000498205 GMPRP36959 345 aa9.04□□□□□ -0.96
SSR3-209ENST00000498205 UBAP2LQ14157 1087 aaKnown RBP9.04□□□□□ -0.96
SSR3-209ENST00000498205 NGLY1Q96IV0 654 aa9.04□□□□□ -0.96
SSR3-209ENST00000498205 COL25A1Q9BXS0 654 aaPredicted RBP9.04□□□□□ -0.96
SSR3-209ENST00000498205 LGR5O75473 907 aa9.03□□□□□ -0.96
SSR3-209ENST00000498205 THBS1P07996 1170 aa9.03□□□□□ -0.96
SSR3-209ENST00000498205 SSFA2P28290 1259 aa9.03□□□□□ -0.96
SSR3-209ENST00000498205 INSM1Q01101 510 aaPredicted RBP9.03□□□□□ -0.96
SSR3-209ENST00000498205 C11orf91Q3C1V1 193 aa9.03□□□□□ -0.96
SSR3-209ENST00000498205 GPR161Q8N6U8 529 aaKnown RBP9.03□□□□□ -0.96
SSR3-209ENST00000498205 NDFIP2Q9NV92 336 aa9.03□□□□□ -0.96
SSR3-209ENST00000498205 TGFBR3LH3BV60 316 aa9.02□□□□□ -0.97
SSR3-209ENST00000498205 MX2P20592 715 aa9.02□□□□□ -0.97
SSR3-209ENST00000498205 MAP2K3P46734 347 aa9.02□□□□□ -0.97
SSR3-209ENST00000498205 SRSF11Q05519 484 aaKnown RBP9.02□□□□□ -0.97
SSR3-209ENST00000498205 FAM182BQ5T319 152 aa9.02□□□□□ -0.97
SSR3-209ENST00000498205 C16orf46Q6P387 395 aa9.02□□□□□ -0.97
SSR3-209ENST00000498205 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
SSR3-209ENST00000498205 RETREG2Q8NC44 543 aa9.02□□□□□ -0.97
SSR3-209ENST00000498205 SUSD3Q96L08 255 aa9.02□□□□□ -0.97
SSR3-209ENST00000498205 BNIP3LO60238 219 aa9.01□□□□□ -0.97
SSR3-209ENST00000498205 FGFR3P22607 806 aa9.01□□□□□ -0.97
SSR3-209ENST00000498205 QTRT2Q9H974 415 aaKnown RBP9.01□□□□□ -0.97
SSR3-209ENST00000498205 GPR25O00155 361 aa9□□□□□ -0.97
SSR3-209ENST00000498205 EPB42P16452 691 aa9□□□□□ -0.97
SSR3-209ENST00000498205 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
SSR3-209ENST00000498205 TNP2Q05952 138 aa9□□□□□ -0.97
SSR3-209ENST00000498205 KHNYNO15037 678 aaKnown RBP8.99□□□□□ -0.97
SSR3-209ENST00000498205 EFSO43281 561 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 MAPTP10636 758 aaKnown RBP8.99□□□□□ -0.97
SSR3-209ENST00000498205 GAS6Q14393 721 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 ABHD17AQ96GS6 310 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 CNTNAP3BQ96NU0 1288 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 CNTNAP3Q9BZ76 1288 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 EFCC1Q9HA90 598 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 C11orf16Q9NQ32 467 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 MARK1Q9P0L2 795 aa8.99□□□□□ -0.97
SSR3-209ENST00000498205 KCNQ4P56696 695 aa8.98□□□□□ -0.97
SSR3-209ENST00000498205 DGKZQ13574 1117 aa8.98□□□□□ -0.97
SSR3-209ENST00000498205 BTLAQ7Z6A9 289 aa8.98□□□□□ -0.97
SSR3-209ENST00000498205 CEP63Q96MT8 703 aa8.98□□□□□ -0.97
SSR3-209ENST00000498205 AVENQ9NQS1 362 aaPredicted RBP8.98□□□□□ -0.97
SSR3-209ENST00000498205 FAM13BQ9NYF5 915 aa8.98□□□□□ -0.97
SSR3-209ENST00000498205 SLAIN2Q9P270 581 aa8.98□□□□□ -0.97
SSR3-209ENST00000498205 DCDC2BA2VCK2 349 aa8.97□□□□□ -0.97
SSR3-209ENST00000498205 SLURP2P0DP57 97 aa8.97□□□□□ -0.97
SSR3-209ENST00000498205 COX20Q5RI15 118 aa8.97□□□□□ -0.97
SSR3-209ENST00000498205 ABTB2Q8N961 1025 aa8.97□□□□□ -0.97
SSR3-209ENST00000498205 HSH2DQ96JZ2 352 aa8.97□□□□□ -0.97
SSR3-209ENST00000498205 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
SSR3-209ENST00000498205 BRD7Q9NPI1 651 aa8.97□□□□□ -0.97
SSR3-209ENST00000498205 LRRC4BQ9NT99 713 aa8.97□□□□□ -0.97
SSR3-209ENST00000498205 BMP4P12644 408 aa8.96□□□□□ -0.98
SSR3-209ENST00000498205 KRT76Q01546 638 aa8.96□□□□□ -0.98
SSR3-209ENST00000498205 TYRO3Q06418 890 aa8.96□□□□□ -0.98
SSR3-209ENST00000498205 NEUROD1Q13562 356 aa8.96□□□□□ -0.98
SSR3-209ENST00000498205 RNFT1Q5M7Z0 435 aa8.96□□□□□ -0.98
SSR3-209ENST00000498205 IGF1RP08069 1367 aa8.96□□□□□ -0.98
SSR3-209ENST00000498205 ARID4AP29374 1257 aaPredicted RBP8.95□□□□□ -0.98
SSR3-209ENST00000498205 ZNF280CQ8ND82 737 aa8.95□□□□□ -0.98
SSR3-209ENST00000498205 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
SSR3-209ENST00000498205 GDF2Q9UK05 429 aaPredicted RBP8.95□□□□□ -0.98
SSR3-209ENST00000498205 LRFN2Q9ULH4 789 aa8.95□□□□□ -0.98
SSR3-209ENST00000498205 KCNH4Q9UQ05 1017 aa8.95□□□□□ -0.98
SSR3-209ENST00000498205 FAM181BA6NEQ2 426 aa8.94□□□□□ -0.98
SSR3-209ENST00000498205 ADAMTS2O95450 1211 aa8.94□□□□□ -0.98
SSR3-209ENST00000498205 ARSDP51689 593 aa8.94□□□□□ -0.98
SSR3-209ENST00000498205 HELQQ8TDG4 1101 aa8.94□□□□□ -0.98
SSR3-209ENST00000498205 KLK14Q9P0G3 267 aa8.94□□□□□ -0.98
SSR3-209ENST00000498205 STIM2Q9P246 746 aa8.94□□□□□ -0.98
SSR3-209ENST00000498205 PATL2C9JE40 543 aaKnown RBP8.93□□□□□ -0.98
SSR3-209ENST00000498205 BRD1O95696 1058 aa8.93□□□□□ -0.98
SSR3-209ENST00000498205 ARAFP10398 606 aa8.93□□□□□ -0.98
SSR3-209ENST00000498205 SF3B2Q13435 895 aaKnown RBP8.93□□□□□ -0.98
SSR3-209ENST00000498205 GOLGA6L1Q8N7Z2 621 aa8.93□□□□□ -0.98
SSR3-209ENST00000498205 ZSCAN1Q8NBB4 408 aa8.93□□□□□ -0.98
SSR3-209ENST00000498205 DMGDHQ9UI17 866 aaKnown RBP8.93□□□□□ -0.98
SSR3-209ENST00000498205 PRR12Q9ULL5 1215 aa8.93□□□□□ -0.98
SSR3-209ENST00000498205 BCS1LQ9Y276 419 aa8.93□□□□□ -0.98
SSR3-209ENST00000498205 NISCHQ9Y2I1 1504 aa8.92□□□□□ -0.98
SSR3-209ENST00000498205 MICAL2O94851 1124 aa8.92□□□□□ -0.98
SSR3-209ENST00000498205 IDH3AP50213 366 aa8.92□□□□□ -0.98
SSR3-209ENST00000498205 NAA30Q147X3 362 aaPredicted RBP8.92□□□□□ -0.98
SSR3-209ENST00000498205 PHLDB3Q6NSJ2 640 aa8.92□□□□□ -0.98
SSR3-209ENST00000498205 ENAMQ9NRM1 1142 aa8.92□□□□□ -0.98
SSR3-209ENST00000498205 EGFL7Q9UHF1 273 aa8.92□□□□□ -0.98
SSR3-209ENST00000498205 CD33P20138 364 aa8.91□□□□□ -0.98
SSR3-209ENST00000498205 INPP5BP32019 993 aa8.91□□□□□ -0.98
SSR3-209ENST00000498205 CTBSQ01459 385 aa8.91□□□□□ -0.98
SSR3-209ENST00000498205 MAP3K10Q02779 954 aa8.91□□□□□ -0.98
SSR3-209ENST00000498205 ALKBH2Q6NS38 261 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms